Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 4.3e-150 534.6 270 100.0
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.6e-139 498.8 270 95.2
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.3e-127 459.9 270 88.5
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 3.9e-127 458.4 270 87.8
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 6.4e-122 441.0 270 84.4
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 4.8e-93 345.1 273 65.9
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 6.9e-92 341.3 259 66.0
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 1.5e-91 340.1 259 66.4
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 2.0e-91 339.7 271 64.6
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 2.6e-91 339.3 259 65.6
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 2.6e-91 339.3 259 65.6
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 3.4e-91 339.0 259 65.6
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 4.5e-91 338.6 259 66.4
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 7.6e-91 337.8 258 65.9
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 2.2e-90 336.3 259 65.6
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 3.8e-90 335.5 259 64.9
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 6.5e-90 334.7 259 64.5
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 6.5e-90 334.7 259 64.5
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 6.5e-90 334.7 258 65.1
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 8.4e-90 334.3 274 64.2
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 8.4e-90 334.3 252 66.7
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 8.4e-90 334.3 259 64.5
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 8.4e-90 334.3 259 65.6
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 1.1e-89 334.0 271 63.1
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 1.4e-89 333.6 275 63.3
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 1.4e-89 333.6 264 65.2
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 1.4e-89 333.6 264 65.2
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.9e-89 333.2 264 64.8
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 2.5e-89 332.8 264 65.2
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 2.5e-89 332.8 262 64.1
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 4.2e-89 332.0 264 64.4
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 5.5e-89 331.6 259 64.9
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 7.1e-89 331.3 273 62.6
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 9.3e-89 330.9 270 62.6
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 1.2e-88 330.5 259 64.5
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.1e-88 329.7 258 64.0
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.7e-88 329.3 258 64.0
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 2.7e-88 329.3 273 61.9
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 6.1e-88 328.2 259 63.7
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 7.9e-88 327.8 259 62.2
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 7.9e-88 327.8 264 64.4
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.0e-87 327.4 259 62.2
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.0e-87 327.4 259 62.2
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 1.8e-87 326.6 273 61.2
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 2.3e-87 326.2 264 64.4
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 3.0e-87 325.9 264 64.4
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 3.0e-87 325.9 265 62.6
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 3.9e-87 325.5 264 62.9
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 3.9e-87 325.5 273 61.2
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 3.9e-87 325.5 267 61.8
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 5.1e-87 325.1 259 62.9
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 1.1e-86 323.9 264 64.0
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 1.5e-86 323.6 264 63.6
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 1.5e-86 323.6 264 63.6
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 2.5e-86 322.8 273 60.4
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 3.3e-86 322.4 264 63.6
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 3.3e-86 322.4 259 63.3
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 5.7e-86 321.6 259 64.1
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 7.4e-86 321.2 254 63.4
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 1.3e-85 320.5 259 62.2
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 1.3e-85 320.5 259 61.4
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 1.6e-85 320.1 259 62.2
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 2.2e-85 319.7 259 62.5
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 2.2e-85 319.7 259 62.5
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 6.3e-85 318.2 253 62.8
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 3.1e-84 315.8 264 62.1
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 1.2e-83 313.9 259 61.0
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 1.2e-83 313.9 269 62.5
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.0e-83 313.2 256 59.8
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 2.6e-83 312.8 279 59.5
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.3e-82 310.5 303 55.8
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 1.7e-82 310.1 278 57.9
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 1.9e-81 306.6 261 59.4
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.9e-81 306.6 272 58.8
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 1.2e-80 303.9 258 58.9
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.6e-80 303.5 279 56.3
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 2.1e-80 303.1 282 57.8
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 2.7e-80 302.8 273 58.6
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 3.6e-80 302.4 272 58.1
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 1.0e-79 300.8 267 57.7
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 1.8e-79 300.1 260 57.3
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 2.3e-79 299.7 267 57.7
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 7.4e-78 294.7 259 59.1
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 2.2e-77 293.1 227 67.4
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 6.9e-76 288.1 227 63.9
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 1.2e-75 287.3 265 54.0
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 5.9e-75 285.0 266 56.0
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 2.9e-74 282.7 233 63.1
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 8.5e-74 281.2 255 58.0
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 2.5e-73 279.6 266 55.6
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 8.2e-69 264.6 257 52.1
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 1.8e-68 263.5 263 51.3
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 7.7e-67 258.1 250 54.0
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 4.0e-63 245.7 222 57.7
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 2.6e-62 243.0 224 58.5
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 1.7e-61 240.4 259 51.7
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.1e-60 237.7 293 48.1
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 4.1e-60 235.7 260 46.2
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 2.2e-58 229.9 222 52.3
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.6e-56 223.8 324 42.3
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.7e-56 223.0 225 54.7
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 2.0e-54 216.9 257 44.4
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 3.7e-53 212.6 195 56.4
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 5.9e-51 205.3 256 41.8
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 6.1e-48 195.3 259 41.7
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 2.0e-46 190.3 153 58.2
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 5.7e-46 188.7 225 49.3
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.7e-45 187.2 140 61.4
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 8.3e-45 184.9 148 58.8
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 9.1e-44 181.4 140 59.3
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 9.1e-44 181.4 140 59.3
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 2.7e-43 179.9 154 61.7
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 7.8e-35 151.8 193 45.6
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 1.9e-33 147.1 154 51.9
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 8.3e-29 131.7 91 71.4
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 7.0e-28 128.6 153 49.7
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 2.9e-21 106.7 77 71.4
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 1.9e-20 104.0 55 80.0
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 2.5e-17 93.6 70 61.4
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 1.2e-16 91.3 65 64.6
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.4e-15 87.8 72 56.9
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 3.1e-15 86.7 61 65.6
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 3.1e-15 86.7 132 43.2
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 5.8e-14 82.4 64 68.8
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 5.6e-09 65.9 136 27.9


User provided reference genes

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