Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.9e-243 844.7 414 100.0
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.5e-239 832.4 414 98.8
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 1.9e-237 825.5 415 98.3
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.0e-236 822.0 411 98.3
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 9.5e-234 813.1 438 93.2
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 4.3e-218 761.1 416 91.8
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 3.5e-196 688.3 423 83.0
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 3.0e-195 685.3 417 83.5
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 1.5e-194 682.9 414 82.6
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 1.5e-194 682.9 414 82.6
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 1.9e-194 682.6 414 82.6
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 3.7e-193 678.3 418 82.1
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 3.9e-187 658.3 421 78.1
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 2.9e-182 642.1 414 78.0
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 1.6e-180 636.3 421 76.5
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 1.3e-179 633.3 419 76.4
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 8.7e-179 630.6 424 76.7
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 7.4e-178 627.5 421 77.0
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 3.7e-177 625.2 419 75.7
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 4.8e-177 624.8 414 75.1
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 6.3e-177 624.4 414 74.9
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 2.4e-176 622.5 427 73.8
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 2.4e-176 622.5 424 76.2
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 2.4e-176 622.5 417 75.5
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 3.1e-176 622.1 424 77.1
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 5.3e-176 621.3 409 78.0
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.3e-174 616.7 421 76.0
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.7e-174 616.3 426 74.6
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 3.8e-174 615.1 421 75.8
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 6.5e-174 614.4 417 75.3
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.9e-173 612.8 421 75.1
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 7.2e-173 610.9 416 75.0
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 9.4e-173 610.5 428 73.8
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 6.1e-172 607.8 427 72.6
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 6.1e-172 607.8 416 74.8
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 3.9e-171 605.1 427 74.2
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.5e-170 603.2 414 73.2
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 4.3e-170 601.7 420 73.1
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 2.2e-169 599.4 414 72.5
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 3.7e-169 598.6 414 73.9
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 3.7e-169 598.6 414 73.4
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 9.1e-168 594.0 417 73.1
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 1.2e-167 593.6 424 71.0
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 1.7e-166 589.7 424 72.9
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 2.9e-166 589.0 415 72.5
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 3.8e-166 588.6 417 70.5
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 4.2e-165 585.1 415 72.8
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 2.3e-163 579.3 414 72.7
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 3.0e-163 578.9 415 72.3
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 5.1e-163 578.2 416 71.9
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 5.1e-163 578.2 417 71.5
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 8.8e-163 577.4 419 72.3
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 7.4e-162 574.3 418 69.4
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 3.1e-160 568.9 415 71.8
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 3.1e-160 568.9 418 68.4
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 7.0e-160 567.8 418 67.5
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 7.0e-160 567.8 423 69.5
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 1.6e-159 566.6 419 68.0
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 3.5e-159 565.5 416 70.4
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 3.5e-159 565.5 419 68.7
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 4.5e-159 565.1 418 67.7
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 4.5e-159 565.1 419 67.8
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 3.2e-157 558.9 422 68.2
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 9.4e-157 557.4 414 68.4
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 3.6e-156 555.4 414 68.4
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 4.7e-156 555.1 420 67.6
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 1.0e-155 553.9 420 67.6
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 3.0e-155 552.4 420 67.1
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 3.0e-155 552.4 420 67.1
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 3.0e-155 552.4 420 67.1
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 2.8e-153 545.8 421 66.7
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 5.9e-151 538.1 415 67.7
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 3.8e-150 535.4 415 67.2
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 3.8e-150 535.4 415 67.2
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 3.2e-149 532.3 420 67.1
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 1.8e-147 526.6 416 66.3
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 1.3e-145 520.4 419 66.1
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 1.1e-144 517.3 421 65.8
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 1.6e-143 513.5 414 66.4
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 1.6e-143 513.5 415 66.3
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 7.7e-143 511.1 420 65.0
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 2.9e-142 509.2 416 64.7
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 3.8e-142 508.8 424 63.4
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 6.5e-142 508.1 414 65.9
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 8.5e-142 507.7 419 64.9
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 1.9e-141 506.5 403 66.7
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 3.2e-141 505.8 416 64.4
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 7.2e-141 504.6 415 66.0
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 6.8e-139 498.0 417 65.5
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 2.2e-137 493.0 481 58.6
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 4.5e-135 485.3 392 66.1
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 3.3e-133 479.2 404 64.1
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 1.6e-132 476.9 412 62.6
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.2e-127 460.7 364 66.2
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 1.8e-123 446.8 413 59.6
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.9e-120 436.8 257 84.4
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 2.0e-119 433.3 258 84.1
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 1.1e-112 411.0 463 49.5
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 1.3e-110 404.1 276 74.6
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 3.4e-106 389.4 241 81.3
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 3.4e-98 362.8 469 44.1
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 8.4e-97 358.2 277 70.0
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 1.4e-96 357.5 417 49.2
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.1e-93 347.8 246 74.8
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 2.2e-89 333.6 419 47.7
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 6.4e-89 332.0 466 42.5
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 8.1e-76 288.5 438 42.7
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 4.9e-73 279.3 271 56.8
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.4e-72 277.7 184 76.6
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 1.5e-45 188.0 165 53.3
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 9.4e-40 168.7 189 49.2
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 4.1e-35 153.3 191 48.2
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 9.1e-35 152.1 440 28.9
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 2.7e-34 150.6 501 25.3
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 2.2e-33 147.5 489 25.6
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 1.9e-32 144.4 194 42.8
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 2.7e-26 124.0 98 67.3
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 1.7e-25 121.3 70 84.3
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 8.0e-23 112.5 108 52.8
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 4.0e-14 83.6 106 44.3


User provided reference genes

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