Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.4e-170 602.1 303 100.0
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.2e-169 599.7 303 99.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.3e-168 596.3 303 98.7
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.3e-168 595.5 303 99.0
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 1.1e-167 593.2 303 98.7
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 9.6e-167 590.1 303 98.0
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 2.3e-152 542.3 303 89.4
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 2.3e-152 542.3 303 90.1
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 4.2e-146 521.5 302 86.8
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 1.6e-145 519.6 299 87.0
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 2.1e-145 519.2 299 86.6
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 6.0e-145 517.7 301 84.7
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 3.0e-144 515.4 303 84.2
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.9e-144 515.0 303 84.5
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.9e-144 515.0 303 84.5
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 1.1e-143 513.5 302 84.4
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 4.3e-143 511.5 303 83.2
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 7.4e-143 510.8 303 83.8
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.3e-142 510.0 299 84.3
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 1.3e-142 510.0 299 84.3
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 2.1e-142 509.2 299 84.9
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 2.8e-142 508.8 299 83.6
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 3.7e-142 508.4 302 83.4
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 1.1e-141 506.9 303 83.8
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 4.1e-141 505.0 299 83.9
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 2.0e-140 502.7 303 81.8
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 4.5e-140 501.5 303 82.2
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 5.0e-139 498.0 303 82.2
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 6.5e-139 497.7 303 82.5
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 6.5e-139 497.7 303 82.5
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 1.1e-138 496.9 303 81.8
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 1.9e-138 496.1 303 80.5
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 9.3e-138 493.8 303 81.5
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 3.6e-137 491.9 303 79.2
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 6.1e-137 491.1 299 82.3
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 7.9e-137 490.7 303 81.8
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.3e-136 490.0 303 81.2
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.3e-136 490.0 303 81.2
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 1.3e-136 490.0 303 80.9
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.0e-136 488.8 303 80.9
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 3.9e-136 488.4 303 80.9
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 1.1e-135 486.9 303 79.2
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 5.7e-135 484.6 301 80.4
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.3e-134 483.4 303 78.5
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 3.7e-134 481.9 303 79.5
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 4.8e-134 481.5 303 79.5
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 4.8e-134 481.5 303 79.5
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 8.2e-134 480.7 303 79.5
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 5.3e-133 478.0 303 78.5
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 4.5e-132 474.9 299 79.3
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 1.3e-131 473.4 303 78.9
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.7e-131 473.0 299 78.9
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 2.2e-131 472.6 299 78.9
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 3.8e-131 471.9 299 78.6
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 6.5e-131 471.1 303 77.6
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.4e-130 469.9 295 79.0
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 1.4e-130 469.9 303 78.2
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 2.5e-130 469.2 303 75.6
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 6.7e-128 461.1 303 75.6
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 1.1e-127 460.3 306 75.5
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 3.3e-127 458.8 305 74.8
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 7.4e-127 457.6 306 75.5
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.3e-126 456.8 299 73.9
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 2.2e-126 456.1 302 76.2
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 4.8e-126 454.9 302 74.8
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 8.2e-126 454.1 305 76.1
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 1.4e-125 453.4 298 76.2
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 1.2e-124 450.3 305 76.1
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 3.4e-124 448.7 298 75.5
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 4.5e-124 448.4 298 75.5
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 7.7e-124 447.6 298 74.8
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.0e-123 447.2 298 74.5
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 1.3e-123 446.8 298 74.2
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 1.4e-122 443.4 298 73.8
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 1.9e-122 443.0 299 73.6
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 4.2e-122 441.8 303 71.6
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 5.5e-122 441.4 301 72.4
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 7.2e-122 441.0 298 73.8
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 9.4e-122 440.7 306 72.5
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 1.6e-121 439.9 298 73.8
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 2.1e-121 439.5 298 74.2
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 2.1e-121 439.5 298 74.2
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 3.6e-121 438.7 311 72.3
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 7.9e-121 437.6 298 74.2
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.0e-120 437.2 298 73.2
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.0e-120 437.2 298 73.2
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.0e-120 437.2 298 73.2
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 1.4e-120 436.8 275 80.0
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 3.9e-120 435.3 302 71.9
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 8.8e-120 434.1 302 72.2
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 1.1e-119 433.7 302 72.5
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 1.5e-119 433.3 299 72.2
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 1.4e-117 426.8 287 74.6
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 2.4e-117 426.0 306 70.9
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 4.2e-114 415.2 299 70.9
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.3e-110 403.7 251 79.7
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 8.2e-110 401.0 249 77.9
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.0e-103 379.8 301 65.8
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 3.1e-101 372.5 234 78.6
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 1.2e-100 370.5 225 81.3
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 1.2e-100 370.5 215 84.7
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 2.0e-100 369.8 299 63.5
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 5.9e-100 368.2 261 72.0
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 5.9e-100 368.2 307 61.2
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.5e-98 363.6 232 77.6
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 9.5e-98 360.9 221 80.1
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 2.1e-97 359.8 249 70.3
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.4e-96 357.1 225 78.2
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 4.1e-93 345.5 219 78.1
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 5.9e-92 341.7 255 66.7
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 7.5e-87 324.7 277 60.3
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 6.6e-83 311.6 343 51.9
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 7.5e-79 298.1 303 55.8
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 3.2e-77 292.7 172 79.7
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 4.9e-62 242.3 317 45.7
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 8.1e-49 198.4 143 73.4
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 4.2e-45 186.0 163 60.1
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.5e-42 177.6 343 36.7
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 3.3e-42 176.4 303 40.6
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 2.8e-41 173.3 177 52.5
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 5.8e-39 165.6 105 79.0
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 5.6e-34 149.1 88 76.1
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 1.2e-28 131.3 91 70.3
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 5.1e-27 125.9 86 77.9
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 9.7e-26 121.7 89 73.0
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 1.1e-24 118.2 72 73.6
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 6.9e-24 115.5 318 33.3
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 5.5e-21 105.9 135 46.7
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 2.3e-19 100.5 64 82.8
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 8.2e-17 92.0 68 60.3
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 1.0e-11 75.1 46 76.1


User provided reference genes

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