Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.3e-198 696.4 406 100.0
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 4.2e-194 681.4 406 98.8
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 1.6e-185 652.9 402 97.0
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 6.2e-169 597.8 406 89.9
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 5.6e-138 495.0 360 81.4
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 2.9e-134 482.6 364 78.3
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 6.9e-120 434.9 297 75.4
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 1.7e-118 430.3 291 74.6
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 1.4e-117 427.2 307 73.3
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 2.5e-117 426.4 301 73.4
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 5.5e-117 425.2 286 75.5
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 9.3e-117 424.5 302 75.2
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 3.5e-116 422.5 301 73.8
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 1.8e-115 420.2 300 71.3
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 3.9e-115 419.1 301 72.8
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 3.7e-113 412.5 296 70.3
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.1e-112 411.0 301 70.1
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 1.4e-112 410.6 301 70.4
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.8e-112 410.2 299 72.6
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 9.0e-112 407.9 267 75.7
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 2.0e-111 406.8 294 70.1
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 5.0e-110 402.1 298 72.1
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 8.5e-110 401.4 339 66.7
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 2.1e-108 396.7 339 63.4
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 2.3e-107 393.3 301 69.1
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 2.3e-107 393.3 295 70.8
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 3.0e-107 392.9 302 68.5
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 3.3e-106 389.4 297 66.0
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 5.7e-106 388.7 265 74.3
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 9.7e-106 387.9 285 68.8
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 9.7e-106 387.9 292 69.5
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 2.2e-105 386.7 290 67.9
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 2.2e-105 386.7 293 69.6
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 2.8e-105 386.3 242 78.5
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 4.8e-105 385.6 302 65.2
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 4.8e-105 385.6 306 67.3
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 8.2e-105 384.8 290 66.9
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.1e-104 384.4 304 66.4
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 1.8e-104 383.6 295 66.1
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 4.1e-104 382.5 295 66.1
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 4.1e-104 382.5 295 65.8
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 6.9e-104 381.7 289 67.1
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 6.9e-104 381.7 296 69.3
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 6.9e-104 381.7 243 79.0
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 6.9e-104 381.7 273 68.1
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 1.5e-103 380.6 314 75.2
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 2.0e-103 380.2 306 64.4
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.3e-102 377.5 304 67.1
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 2.2e-102 376.7 290 66.2
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 3.8e-102 375.9 294 66.3
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 5.0e-102 375.6 277 67.1
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 5.0e-102 375.6 290 66.2
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 6.5e-102 375.2 294 66.0
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 6.5e-102 375.2 302 67.2
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 1.1e-101 374.4 290 66.9
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 1.4e-101 374.0 324 63.0
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 1.4e-101 374.0 294 66.0
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 4.2e-101 372.5 293 66.9
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 4.2e-101 372.5 281 68.3
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 4.2e-101 372.5 287 67.2
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 2.1e-100 370.2 295 66.4
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 3.6e-100 369.4 243 75.3
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 3.9e-99 365.9 319 61.1
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 5.1e-99 365.5 242 75.2
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 6.7e-99 365.2 295 62.7
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 2.6e-98 363.2 236 75.8
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 7.0e-96 355.1 216 82.4
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 6.5e-94 348.6 224 77.2
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 6.5e-94 348.6 254 69.7
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 3.6e-92 342.8 266 65.8
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 6.1e-92 342.0 273 66.3
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 8.0e-92 341.7 223 74.0
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 6.7e-91 338.6 223 74.9
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 2.2e-86 323.6 236 70.3
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 2.7e-84 316.6 234 69.7
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 1.1e-80 304.7 243 60.5
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 9.1e-80 301.6 230 66.1
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 4.0e-75 286.2 209 67.9
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 7.5e-74 282.0 166 84.3
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 1.3e-70 271.2 206 68.0
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 2.8e-68 263.5 162 79.6
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 2.0e-66 257.3 169 74.6
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 1.5e-61 241.1 244 52.9
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 2.5e-61 240.4 242 52.9
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 9.5e-61 238.4 170 72.4
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 5.2e-59 232.6 206 61.2
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 9.8e-58 228.4 170 69.4
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 2.0e-50 204.1 129 79.1
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 8.9e-43 178.7 239 49.0
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 4.4e-42 176.4 239 40.6
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 1.7e-41 174.5 187 48.7
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.9e-33 147.1 82 84.1
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 2.4e-32 144.1 162 46.9
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.6e-26 124.0 74 77.0


User provided reference genes

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