Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.2e-253 879.4 457 100.0
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 7.2e-251 870.2 461 97.0
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.6e-250 867.8 461 94.8
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.1e-250 867.1 462 94.6
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 4.7e-242 840.9 426 96.2
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 9.8e-232 806.6 425 91.1
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 6.0e-229 797.3 426 89.9
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.6e-228 793.9 509 84.7
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 4.3e-227 791.2 427 89.0
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 4.3e-227 791.2 426 89.2
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 3.6e-226 788.1 427 88.3
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 4.7e-226 787.7 433 88.5
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 1.1e-225 786.6 462 83.1
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 1.4e-225 786.2 427 88.8
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 3.1e-225 785.0 427 88.1
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 6.8e-225 783.9 425 88.0
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 1.2e-224 783.1 424 88.7
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.5e-224 782.7 426 86.4
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 1.5e-224 782.7 427 87.6
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 3.4e-224 781.6 427 87.6
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 5.8e-224 780.8 427 86.9
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 5.8e-224 780.8 424 87.7
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 7.5e-224 780.4 427 88.3
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 9.8e-224 780.0 427 87.8
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 1.3e-223 779.6 425 86.8
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 2.2e-223 778.9 425 87.3
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 2.9e-223 778.5 427 87.1
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 6.4e-223 777.3 424 87.7
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 8.3e-223 776.9 424 87.5
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 8.3e-223 776.9 424 87.0
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 8.3e-223 776.9 422 87.9
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 1.9e-222 775.8 427 87.1
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.9e-222 775.8 427 86.4
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 2.4e-222 775.4 427 86.9
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 2.4e-222 775.4 424 87.3
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 4.1e-222 774.6 425 87.1
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 5.4e-222 774.2 428 85.7
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 2.1e-221 772.3 428 86.2
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 7.8e-221 770.4 427 85.5
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 1.0e-220 770.0 428 85.7
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 1.7e-220 769.2 425 85.9
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 3.0e-220 768.5 425 86.6
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 3.0e-220 768.5 424 87.3
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 3.0e-220 768.5 428 85.3
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 3.0e-220 768.5 428 85.3
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.5e-219 766.1 427 85.9
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.9e-219 765.8 428 84.8
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 7.3e-219 763.8 425 85.2
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 9.5e-219 763.5 428 84.8
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.2e-218 763.1 428 84.6
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.2e-218 763.1 425 85.4
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 2.8e-218 761.9 428 84.3
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 3.6e-218 761.5 428 84.3
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 3.6e-218 761.5 428 84.6
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 3.6e-218 761.5 425 84.2
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 4.7e-218 761.1 425 84.5
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 8.1e-218 760.4 454 81.5
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 8.1e-218 760.4 425 84.5
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 1.4e-217 759.6 428 84.1
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 1.8e-217 759.2 425 83.3
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 1.8e-217 759.2 427 84.8
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 3.1e-217 758.4 428 84.1
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 4.0e-217 758.1 443 83.3
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 8.9e-217 756.9 424 84.9
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 8.9e-217 756.9 427 83.4
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 2.0e-216 755.7 424 85.6
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 2.6e-216 755.4 422 84.1
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 7.6e-216 753.8 415 86.0
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 9.9e-216 753.4 429 83.9
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 1.7e-212 742.7 426 85.4
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 8.6e-212 740.3 445 81.6
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.1e-211 740.0 449 78.4
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 2.5e-211 738.8 423 82.7
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.2e-210 736.5 416 83.2
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 6.9e-209 730.7 420 82.6
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 7.6e-208 727.2 424 81.6
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 9.9e-208 726.9 422 80.3
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 2.4e-206 722.2 401 87.0
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 4.6e-205 718.0 423 79.7
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 1.7e-204 716.1 420 81.2
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 5.1e-204 714.5 491 74.1
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.6e-202 709.5 426 78.9
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 2.4e-201 705.7 421 78.6
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 6.9e-201 704.1 418 78.5
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 2.2e-199 699.1 418 78.5
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 2.9e-199 698.7 401 83.0
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 2.3e-196 689.1 444 78.2
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 9.6e-195 683.7 382 87.2
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 6.2e-194 681.0 453 74.8
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 6.9e-193 677.6 425 77.4
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 2.9e-191 672.2 401 84.0
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.1e-190 670.2 523 67.5
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 2.4e-185 652.5 425 75.1
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 1.3e-183 646.7 365 85.2
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.1e-182 643.7 387 80.6
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 5.5e-182 641.3 421 70.8
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 1.6e-178 629.8 357 85.4
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.6e-170 603.2 399 74.4
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 2.0e-168 596.3 425 67.1
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 5.5e-166 588.2 421 66.0
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 2.3e-164 582.8 377 77.7
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 8.8e-156 554.3 489 61.8
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 1.1e-137 494.2 272 86.4
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 5.4e-137 491.9 423 60.5
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 7.0e-137 491.5 264 89.0
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 4.2e-134 482.3 268 86.6
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 1.0e-132 477.6 374 62.6
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 2.4e-113 413.3 224 89.3
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 1.7e-66 257.7 189 68.8
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 2.5e-65 253.8 147 82.3
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.2e-59 235.0 147 75.5
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 2.7e-40 170.6 90 84.4
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 5.9e-27 126.3 70 87.1
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 5.9e-27 126.3 79 72.2
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 5.0e-18 96.7 52 84.6
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 7.2e-17 92.8 49 89.8
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.0e-10 72.4 49 69.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.0e-10 72.4 42 78.6
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.6e-10 69.7 42 73.8
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 2.3e-07 61.2 40 75.0


User provided reference genes

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