Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G1868 Fragaria x ananassa HOM05D004931 ORTHO05D006579 9.0e-187 656.8 328 100.0
FAN17G1056 Fragaria x ananassa HOM05D004931 ORTHO05D006579 2.5e-168 595.5 328 92.4
FvH4_4g22670 Fragaria vesca HOM05D004931 ORTHO05D006579 3.8e-153 545.0 298 94.0
FAN12G1488 Fragaria x ananassa HOM05D004931 ORTHO05D006579 6.5e-145 517.7 304 88.2
Prupe.1G215300 Prunus persica HOM05D004931 ORTHO05D006579 1.2e-138 496.9 298 87.2
CiPaw.05G101400 Carya illinoinensis HOM05D004931 ORTHO05D006579 5.8e-125 451.4 297 78.8
Cfa009447 Carpinus fangiana HOM05D004931 ORTHO05D006579 1.3e-124 450.3 296 79.4
Haze_12500 Corylus avellana HOM05D004931 ORTHO05D006579 3.7e-124 448.7 298 79.2
Dinv06619 Davidia involucrata HOM05D004931 ORTHO05D006579 7.0e-123 444.5 305 75.7
MD00G1177400 Malus domestica HOM05D004931 ORTHO05D006579 3.5e-122 442.2 259 87.6
Thecc.02G192700 Theobroma cacao HOM05D004931 ORTHO05D006579 4.6e-122 441.8 298 77.5
COL.COLO4_21767 Corchorus olitorius HOM05D004931 ORTHO05D006579 6.0e-122 441.4 300 78.3
RcHm_v2.0_Chr4g0428911 Rosa chinensis HOM05D004931 ORTHO05D006579 6.0e-122 441.4 298 79.9
Gohir.D02G175400 Gossypium hirsutum HOM05D004931 ORTHO05D006579 1.3e-121 440.3 296 78.0
Gohir.A03G152300 Gossypium hirsutum HOM05D004931 ORTHO05D006579 1.7e-121 439.9 296 78.0
Gorai.005G197000 Gossypium raimondii HOM05D004931 ORTHO05D006579 1.1e-120 437.2 296 77.7
CSS0024647 Camellia sinensis var. sinensis HOM05D004931 ORTHO05D006579 2.8e-119 432.6 305 73.8
MD13G1130400 Malus domestica HOM05D004931 ORTHO05D006579 2.8e-119 432.6 267 84.6
QL03p049374 Quercus lobata HOM05D004931 ORTHO05D006579 4.7e-119 431.8 320 72.5
Ciclev10005352m.g Citrus clementina HOM05D004931 ORTHO05D006579 1.4e-118 430.3 278 78.8
Actinidia34703 Actinidia chinensis HOM05D004931 ORTHO05D006579 3.1e-118 429.1 300 77.3
Atru.chr12.1413 Acer truncatum HOM05D004931 ORTHO05D006579 5.2e-118 428.3 300 72.0
Manes.08G101500 Manihot esculenta HOM05D004931 ORTHO05D006579 7.5e-117 424.5 298 73.5
Cpa.g.sc38.82 Carica papaya HOM05D004931 ORTHO05D006579 8.3e-116 421.0 288 78.8
Glyma.15G065800 Glycine max HOM05D004931 ORTHO05D006579 1.1e-115 420.6 300 72.3
CANSAT01G2308 Cannabis sativa HOM05D004931 ORTHO05D006579 1.9e-115 419.9 300 74.3
Rhsim09G0128100 Rhododendron simsii HOM05D004931 ORTHO05D006579 3.2e-115 419.1 333 69.7
TAR622G0753 Trochodendron aralioides HOM05D004931 ORTHO05D006579 4.1e-115 418.7 301 71.8
vmacro10419 Vaccinium macrocarpon HOM05D004931 ORTHO05D006579 7.1e-115 417.9 300 75.0
Cc11_g15020 Coffea canephora HOM05D004931 ORTHO05D006579 1.2e-114 417.2 290 73.1
Nn3g16276 Nelumbo nucifera HOM05D004931 ORTHO05D006579 1.2e-114 417.2 298 74.5
CsaV3_4G002250 Cucumis sativus L. HOM05D004931 ORTHO05D006579 1.6e-114 416.8 297 71.7
MELO3C017814.2 Cucumis melo HOM05D004931 ORTHO05D006579 2.1e-114 416.4 297 71.7
TWI36G0173 Tripterygium wilfordii HOM05D004931 ORTHO05D006579 2.1e-114 416.4 306 73.2
Glyma.13G248100 Glycine max HOM05D004931 ORTHO05D006579 4.6e-114 415.2 300 71.7
Sed0000722 Sechium edule HOM05D004931 ORTHO05D006579 6.0e-114 414.8 287 72.8
Potri.003G162600 Populus trichocarpa HOM05D004931 ORTHO05D006579 7.8e-114 414.5 302 71.2
Duzib248G0794 Durio zibethinus HOM05D004931 ORTHO05D006579 1.7e-113 413.3 261 80.1
TAR374G0634 Trochodendron aralioides HOM05D004931 ORTHO05D006579 1.7e-113 413.3 301 71.4
Medtr2g011420 Medicago truncatula HOM05D004931 ORTHO05D006579 3.0e-113 412.5 298 71.8
VMungo0540G0694 Vigna mungo HOM05D004931 ORTHO05D006579 3.9e-113 412.1 298 71.8
GSVIVG01001087001 Vitis vinifera HOM05D004931 ORTHO05D006579 3.9e-113 412.1 300 71.0
AUR62005713 Chenopodium quinoa HOM05D004931 ORTHO05D006579 5.1e-113 411.8 272 75.4
Lj6A838G27 Lonicera japonica HOM05D004931 ORTHO05D006579 6.6e-113 411.4 342 66.1
Lj6g0004184 Lotus japonicus HOM05D004931 ORTHO05D006579 6.6e-113 411.4 298 71.8
Ca_00224_v3 Cicer arietinum L. HOM05D004931 ORTHO05D006579 3.3e-112 409.1 268 75.0
Lsat_1_v5_gn_2_17061 Lactuca sativa HOM05D004931 ORTHO05D006579 7.3e-112 407.9 288 71.9
Phvul.006G193900 Phaseolus vulgaris HOM05D004931 ORTHO05D006579 7.3e-112 407.9 301 71.1
PGR102G0149 Punica granatum HOM05D004931 ORTHO05D006579 1.6e-111 406.8 288 72.6
Solyc04g045480.3 Solanum lycopersicum HOM05D004931 ORTHO05D006579 2.8e-111 406.0 295 69.5
Psat1g210240 Pisum sativum HOM05D004931 ORTHO05D006579 8.1e-111 404.4 300 69.3
Manes.09G188000 Manihot esculenta HOM05D004931 ORTHO05D006579 1.4e-110 403.7 294 71.8
PSO017G2176 Papaver somniferum HOM05D004931 ORTHO05D006579 1.8e-110 403.3 276 73.2
arahy.Tifrunner.gnm1.ann1.BF7HNV Arachis hypogaea HOM05D004931 ORTHO05D006579 6.8e-110 401.4 298 70.8
ClCG07G011910 Citrullus lanatus HOM05D004931 ORTHO05D006579 6.8e-110 401.4 302 69.9
arahy.Tifrunner.gnm1.ann1.Q671IP Arachis hypogaea HOM05D004931 ORTHO05D006579 8.9e-110 401.0 298 70.8
Aqoxy5G03136 Aquilegia oxysepala HOM05D004931 ORTHO05D006579 1.5e-109 400.2 271 72.0
PSO478G0594 Papaver somniferum HOM05D004931 ORTHO05D006579 1.5e-109 400.2 276 72.5
EL10Ac6g13609 Beta vulgaris HOM05D004931 ORTHO05D006579 5.8e-109 398.3 258 75.2
TPR.G19613 Trifolium pratense HOM05D004931 ORTHO05D006579 7.6e-109 397.9 287 69.7
AUR62028841 Chenopodium quinoa HOM05D004931 ORTHO05D006579 9.9e-109 397.5 246 80.1
SGA_v2.0_scaffold81G25976 Striga asiatica HOM05D004931 ORTHO05D006579 1.3e-108 397.1 295 71.5
Sopen04g017340 Solanum pennellii HOM05D004931 ORTHO05D006579 1.7e-108 396.7 269 72.5
ECA238G3692 Erigeron canadensis HOM05D004931 ORTHO05D006579 2.2e-108 396.4 290 72.1
HanXRQChr17g0559151 Helianthus annuus HOM05D004931 ORTHO05D006579 2.2e-108 396.4 314 67.8
SGA_v2.0_scaffold80G25951 Striga asiatica HOM05D004931 ORTHO05D006579 2.9e-108 396.0 298 70.1
Migut.K01057 Erythranthe guttata HOM05D004931 ORTHO05D006579 4.1e-107 392.1 269 73.6
MSTRG.455 Avicennia marina HOM05D004931 ORTHO05D006579 7.1e-107 391.3 293 69.3
THA.LOC104814207 Tarenaya hassleriana HOM05D004931 ORTHO05D006579 4.6e-106 388.7 287 69.0
Potri.001G067400 Populus trichocarpa HOM05D004931 ORTHO05D006579 5.1e-105 385.2 265 74.3
DCAR_024966 Daucus carota HOM05D004931 ORTHO05D006579 9.6e-104 380.9 298 67.4
Thhalv10008031m.g Eutrema salsugineum HOM05D004931 ORTHO05D006579 9.6e-104 380.9 288 68.1
Sp1g24310 Schrenkiella parvula HOM05D004931 ORTHO05D006579 9.6e-104 380.9 288 69.1
CARHR027590 Cardamine hirsuta HOM05D004931 ORTHO05D006579 1.2e-103 380.6 286 68.9
AT1G28120 Arabidopsis thaliana HOM05D004931 ORTHO05D006579 1.6e-103 380.2 286 69.2
AL1G41640 Arabidopsis lyrata HOM05D004931 ORTHO05D006579 4.7e-103 378.6 280 68.6
Ah.02g131420 Amaranthus hybridus HOM05D004931 ORTHO05D006579 8.1e-103 377.9 287 67.6
SalBow2G3164 Salvia bowleyana HOM05D004931 ORTHO05D006579 1.1e-102 377.5 306 66.3
Sc14g0009240 Simmondsia chinensis HOM05D004931 ORTHO05D006579 8.9e-102 374.4 275 67.6
Aa31sc45G20 Aethionema arabicum HOM05D004931 ORTHO05D006579 1.2e-101 374.0 286 68.9
Nitab4.5_0007183g0010 Nicotiana tabacum HOM05D004931 ORTHO05D006579 4.4e-101 372.1 306 65.0
Carub.0001s2655 Capsella rubella HOM05D004931 ORTHO05D006579 7.6e-101 371.3 288 67.0
CDE05G1203 Ceratophyllum demersum HOM05D004931 ORTHO05D006579 1.3e-100 370.5 272 67.6
BcaB03g12136 Brassica carinata HOM05D004931 ORTHO05D006579 4.9e-100 368.6 296 66.9
CDE05G3195 Ceratophyllum demersum HOM05D004931 ORTHO05D006579 3.2e-99 365.9 272 66.5
BolC3t19725H Brassica oleracea HOM05D004931 ORTHO05D006579 1.6e-98 363.6 300 66.7
C03p74760 Brassica napus HOM05D004931 ORTHO05D006579 4.6e-98 362.1 313 64.2
BcaC01g00008 Brassica carinata HOM05D004931 ORTHO05D006579 7.8e-98 361.3 300 66.0
A08p25870 Brassica napus HOM05D004931 ORTHO05D006579 7.8e-98 361.3 313 64.5
unitig_8.g2895 Utricularia gibba HOM05D004931 ORTHO05D006579 6.6e-97 358.2 293 63.1
HPP92_011677 Vanilla planifolia HOM05D004931 ORTHO05D006579 1.3e-95 354.0 282 63.5
HPP92_011736 Vanilla planifolia HOM05D004931 ORTHO05D006579 1.3e-95 354.0 282 63.5
BcaB03g13953 Brassica carinata HOM05D004931 ORTHO05D006579 4.8e-95 352.1 297 65.7
MBI07_g35974_MAGBIO Magnolia biondii HOM05D004931 ORTHO05D006579 4.0e-94 349.0 271 66.8
BraA08t34541Z Brassica rapa HOM05D004931 ORTHO05D006579 2.6e-93 346.3 313 63.3
Nitab4.5_0001408g0040 Nicotiana tabacum HOM05D004931 ORTHO05D006579 7.6e-93 344.7 280 66.8
Os08g0537800 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D006579 1.7e-92 343.6 253 67.2
SEGI_13679 Sequoiadendron giganteum HOM05D004931 ORTHO05D006579 1.0e-89 334.3 256 65.6
ATR0582G144 Amborella trichopoda HOM05D004931 ORTHO05D006579 6.6e-89 331.6 276 60.9
Dinv02758 Davidia involucrata HOM05D004931 ORTHO05D006579 7.4e-88 328.2 233 74.2
BolC7t42231H Brassica oleracea HOM05D004931 ORTHO05D006579 1.1e-86 324.3 240 69.6
CAN.G465.9 Capsicum annuum HOM05D004931 ORTHO05D006579 1.8e-86 323.6 250 66.4
C07p17280 Brassica napus HOM05D004931 ORTHO05D006579 6.9e-86 321.6 240 69.6
Duzib132G0410 Durio zibethinus HOM05D004931 ORTHO05D006579 3.8e-84 315.8 273 63.4
Hund26708 Selenicereus undatus HOM05D004931 ORTHO05D006579 6.4e-84 315.1 242 68.2
Zm00001eb175560 Zea mays HOM05D004931 ORTHO05D006579 1.4e-83 313.9 239 65.7
Mapoly0005s0248 Marchantia polymorpha HOM05D004931 ORTHO05D006579 2.4e-83 313.2 250 62.4
Sed0016914 Sechium edule HOM05D004931 ORTHO05D006579 2.4e-83 313.2 231 71.0
BcaC06g35334 Brassica carinata HOM05D004931 ORTHO05D006579 9.3e-83 311.2 240 67.9
Sabra01G0046800 Salix brachista HOM05D004931 ORTHO05D006579 9.3e-83 311.2 241 68.0
Peaxi162Scf00128g01757 Petunia axillaris HOM05D004931 ORTHO05D006579 7.9e-82 308.1 244 65.6
AagrBONN_evm.TU.Sc2ySwM_368.2426 Anthoceros agrestis HOM05D004931 ORTHO05D006579 6.9e-78 295.0 244 61.5
Lalb_Chr15g0090151 Lupinus albus HOM05D004931 ORTHO05D006579 8.4e-76 288.1 193 75.1
SMO358G0085 Selaginella moellendorffii HOM05D004931 ORTHO05D006579 2.1e-74 283.5 229 61.1
Pp3c5_2520 Physcomitrium patens HOM05D004931 ORTHO05D006579 3.5e-74 282.7 252 57.1
Actinidia31350 Actinidia chinensis HOM05D004931 ORTHO05D006579 1.9e-72 276.9 300 58.7
AagrBONN_evm.TU.Sc2ySwM_26.3 Anthoceros agrestis HOM05D004931 ORTHO05D006579 4.8e-71 272.3 221 62.4
MBI10_g42797_MAGBIO Magnolia biondii HOM05D004931 ORTHO05D006579 4.8e-71 272.3 253 57.7
Pp3c6_24540 Physcomitrium patens HOM05D004931 ORTHO05D006579 6.5e-68 261.9 230 58.3
PSO832G0491 Papaver somniferum HOM05D004931 ORTHO05D006579 1.5e-56 224.2 203 59.1
Cre10.g441500 Chlamydomonas reinhardtii HOM05D004931 ORTHO05D006579 5.5e-51 205.7 279 41.2
PGSC0003DMG401006689 Solanum tuberosum HOM05D004931 ORTHO05D006579 5.2e-49 199.1 158 63.9
A07p11470 Brassica napus HOM05D004931 ORTHO05D006579 1.7e-47 194.1 265 44.9
BraA07t28936Z Brassica rapa HOM05D004931 ORTHO05D006579 1.2e-45 188.0 234 48.7
RcHm_v2.0_Chr7g0205601 Rosa chinensis HOM05D004931 ORTHO05D006579 1.5e-40 171.0 88 94.3
Lalb_Chr18g0060061 Lupinus albus HOM05D004931 ORTHO05D006579 1.7e-39 167.5 100 82.0
Eucgr.B03557 Eucalyptus grandis HOM05D004931 ORTHO05D006579 1.3e-36 157.9 92 81.5
PGSC0003DMG402006689 Solanum tuberosum HOM05D004931 ORTHO05D006579 5.5e-35 152.5 92 77.2
PRCOL_00001027 Prasinoderma coloniale HOM05D004931 ORTHO05D006579 4.7e-34 149.4 244 37.7
Haze_27431 Corylus avellana HOM05D004931 ORTHO05D006579 1.0e-33 148.3 246 37.0
TPR.G382 Trifolium pratense HOM05D004931 ORTHO05D006579 1.6e-29 134.4 83 75.9
PSO170G5257 Papaver somniferum HOM05D004650 ORTHO05D005715 2.9e-28 130.2 90 70.0
FAN01G2784 Fragaria x ananassa HOM05D005362 ORTHO05D006895 6.5e-28 129.0 157 51.6
TPR.G19900 Trifolium pratense HOM05D004931 ORTHO05D006579 1.6e-26 124.4 102 63.7
CBR_g45420 Chara braunii HOM05D000019 ORTHO05D000048 2.2e-23 114.0 91 64.8
Sc17g0004710 Simmondsia chinensis HOM05D004931 ORTHO05D006579 4.1e-22 109.8 103 57.3
ECA238G1930 Erigeron canadensis HOM05D000406 ORTHO05D006918 2.3e-20 104.0 60 81.7
Zm00001eb406040 Zea mays HOM05D004931 ORTHO05D006579 6.1e-18 95.9 256 27.7
TPR.G399 Trifolium pratense HOM05D004931 ORTHO05D006579 1.4e-17 94.7 102 51.0
Zm00001eb037020 Zea mays HOM05D004931 ORTHO05D006579 2.3e-17 94.0 61 70.5
Os04g0652600 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D299584 1.3e-15 88.2 228 26.8
Solyc03g059395.1 Solanum lycopersicum HOM05D004931 ORTHO05D006579 9.2e-14 82.0 51 70.6
Zm00001eb242070 Zea mays HOM05D004931 ORTHO05D037234 1.6e-13 81.3 221 30.8
TPR.G27432 Trifolium pratense HOM05D004931 ORTHO05D006579 2.0e-13 80.9 81 55.6
Zm00001eb406050 Zea mays HOM05D004931 ORTHO05D444756 3.5e-13 80.1 215 27.4
Os02g0521600 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D037234 7.8e-13 79.0 210 28.1
Lalb_Chr18g0060051 Lupinus albus HOM05D004931 ORTHO05D006579 3.0e-12 77.0 47 74.5
BolC2t10441H Brassica oleracea HOM05D004931 ORTHO05D027277 1.6e-10 71.2 80 46.2
Sopen03g014100 Solanum pennellii HOM05D004931 ORTHO05D006579 3.1e-09 67.0 39 76.9
FvH4_7g15160 Fragaria vesca HOM05D005362 ORTHO05D006895 5.2e-09 66.2 132 40.2
C01p27720 Brassica napus HOM05D004931 ORTHO05D027277 2.9e-07 60.5 74 45.9
Cre06.g253755 Chlamydomonas reinhardtii HOM05D018811 ORTHO05D145199 3.7e-07 60.1 254 23.6
Cre06.g253459 Chlamydomonas reinhardtii HOM05D018811 ORTHO05D146359 4.9e-07 59.7 254 23.6


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