Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 8.0e-52 206.8 106 100.0
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.8e-43 179.1 91 100.0
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.6e-42 175.3 91 97.8
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.7e-42 174.1 91 97.8
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 9.8e-42 173.3 91 97.8
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 2.8e-41 171.8 91 96.7
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 2.4e-40 168.7 91 93.4
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.2e-34 149.8 91 81.3
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 2.6e-34 148.7 91 80.2
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 2.6e-34 148.7 91 79.1
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 2.6e-34 148.7 89 79.8
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 3.4e-34 148.3 91 79.1
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 4.4e-34 147.9 91 78.0
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 5.7e-34 147.5 90 80.0
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 7.5e-34 147.1 87 82.8
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 9.8e-34 146.7 91 79.1
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 9.8e-34 146.7 91 78.0
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 9.8e-34 146.7 91 79.1
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 1.3e-33 146.4 90 80.0
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.3e-33 146.4 90 80.0
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 1.3e-33 146.4 91 80.2
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 1.7e-33 146.0 91 79.1
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 2.9e-33 145.2 88 80.7
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 3.7e-33 144.8 96 77.1
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 3.7e-33 144.8 91 75.8
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 4.9e-33 144.4 91 75.8
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 1.1e-32 143.3 91 75.8
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.4e-32 142.9 90 78.9
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 1.8e-32 142.5 95 77.9
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 2.4e-32 142.1 88 79.5
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 5.4e-32 141.0 91 76.9
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 5.4e-32 141.0 91 72.5
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 5.4e-32 141.0 91 76.9
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 7.0e-32 140.6 91 76.9
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 3.5e-31 138.3 89 71.9
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 3.5e-31 138.3 89 71.9
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 4.6e-31 137.9 91 74.7
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 4.6e-31 137.9 91 73.6
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 7.8e-31 137.1 96 74.0
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 7.8e-31 137.1 87 75.9
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.3e-30 136.3 87 74.7
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 2.3e-30 135.6 89 71.9
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 2.3e-30 135.6 91 73.6
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 2.3e-30 135.6 87 71.3
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 3.0e-30 135.2 87 74.7
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 3.9e-30 134.8 89 73.0
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 6.6e-30 134.0 92 70.7
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 1.5e-29 132.9 87 74.7
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.5e-29 132.9 88 72.7
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 1.5e-29 132.9 91 69.2
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.9e-29 132.5 87 73.6
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 2.5e-29 132.1 87 70.1
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.2e-28 129.8 91 69.2
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.2e-28 129.8 88 70.5
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 1.2e-28 129.8 91 70.3
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 1.8e-27 125.9 87 66.7
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 2.3e-27 125.6 87 72.4
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 6.8e-27 124.0 88 70.5
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 2.0e-26 122.5 88 65.9
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 2.6e-26 122.1 91 67.0
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 5.8e-26 120.9 89 65.2
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 5.8e-26 120.9 91 64.8
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 1.7e-25 119.4 87 63.2
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 2.2e-25 119.0 87 66.7
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 2.9e-25 118.6 77 70.1
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 2.9e-25 118.6 77 70.1
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 3.2e-24 115.2 89 58.4
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 7.0e-24 114.0 86 64.0
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 1.3e-22 109.8 93 60.2
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 9.5e-21 103.6 93 55.9
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 2.8e-20 102.1 87 57.5
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 3.6e-20 101.7 91 59.3
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 4.7e-20 101.3 70 64.3
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 3.1e-19 98.6 139 46.8
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 6.8e-19 97.4 80 58.8
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 7.5e-18 94.0 96 53.1
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 9.8e-18 93.6 96 55.2
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 2.9e-17 92.0 88 50.0
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 4.9e-17 91.3 96 53.1
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 6.4e-17 90.9 58 77.6
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.4e-16 89.7 86 50.0
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 1.9e-16 89.4 93 51.6
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 2.4e-16 89.0 74 62.2
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 3.2e-16 88.6 76 64.5
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 4.1e-16 88.2 87 52.9
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 7.1e-16 87.4 91 49.5
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 7.1e-16 87.4 91 49.5
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 1.6e-15 86.3 94 48.9
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 2.7e-15 85.5 88 47.7
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 7.8e-15 84.0 65 61.5
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 1.7e-14 82.8 91 47.3
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 1.7e-14 82.8 91 47.3
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 2.3e-14 82.4 92 46.7
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 6.6e-14 80.9 98 48.0
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 3.3e-13 78.6 60 65.0
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.2e-12 76.6 64 53.1
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 4.7e-12 74.7 63 54.0
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.1e-11 72.0 93 43.0
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.1e-11 72.0 64 51.6
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 3.1e-11 72.0 86 44.2
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 5.8e-10 67.8 52 59.6
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 7.6e-10 67.4 86 41.9
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 7.1e-08 60.8 88 39.8
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 2.7e-07 58.9 63 54.0


User provided reference genes

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