Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.0e-96 355.1 174 100.0
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 8.1e-94 347.1 174 98.3
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.8e-93 345.9 174 98.3
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.5e-84 316.2 160 97.5
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 3.8e-83 311.6 174 88.5
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 4.2e-66 255.0 175 74.3
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 4.6e-65 251.5 184 73.9
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 2.3e-64 249.2 175 74.3
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.0e-56 222.2 160 70.0
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 1.5e-55 219.9 204 59.8
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 5.7e-55 218.0 160 69.4
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 9.7e-55 217.2 160 68.8
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 4.8e-54 214.9 139 71.9
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 1.1e-53 213.8 180 65.0
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 1.4e-53 213.4 174 63.8
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.1e-53 212.2 148 72.3
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 6.9e-53 211.1 125 77.6
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 9.1e-53 210.7 116 82.8
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 9.1e-53 210.7 116 82.8
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 9.1e-53 210.7 125 76.8
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 9.1e-53 210.7 116 82.8
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 2.6e-52 209.1 125 76.8
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 3.4e-52 208.8 179 61.5
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 4.5e-52 208.4 147 72.1
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 4.5e-52 208.4 178 61.2
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 4.5e-52 208.4 177 61.6
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 5.9e-52 208.0 180 61.1
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 7.7e-52 207.6 117 80.3
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 7.7e-52 207.6 122 77.0
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 7.7e-52 207.6 153 68.6
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 1.0e-51 207.2 182 58.8
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 1.0e-51 207.2 171 62.0
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 1.3e-51 206.8 174 63.2
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 1.3e-51 206.8 169 63.9
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 1.7e-51 206.5 168 63.1
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 2.2e-51 206.1 178 61.2
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 2.9e-51 205.7 151 67.5
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 2.9e-51 205.7 151 67.5
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 2.9e-51 205.7 173 60.1
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 2.9e-51 205.7 165 64.2
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 2.9e-51 205.7 178 61.8
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 3.8e-51 205.3 175 61.7
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 5.0e-51 204.9 174 59.8
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 8.5e-51 204.1 114 82.5
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.1e-50 203.8 154 66.9
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.1e-50 203.8 144 66.0
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 1.9e-50 203.0 158 64.6
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 2.5e-50 202.6 169 60.9
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 4.2e-50 201.8 176 61.4
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 5.5e-50 201.4 194 56.2
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 5.5e-50 201.4 181 59.7
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 7.2e-50 201.1 139 67.6
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 1.2e-49 200.3 160 60.6
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 1.6e-49 199.9 151 66.2
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 1.6e-49 199.9 161 62.1
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 2.7e-49 199.1 151 65.6
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 2.7e-49 199.1 151 65.6
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 4.7e-49 198.4 144 63.9
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 6.1e-49 198.0 172 63.4
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 8.0e-49 197.6 186 57.5
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 8.0e-49 197.6 111 78.4
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 8.0e-49 197.6 172 59.9
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 8.0e-49 197.6 170 61.8
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 8.0e-49 197.6 133 72.9
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 8.0e-49 197.6 140 67.1
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 1.8e-48 196.4 166 65.1
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 5.2e-48 194.9 117 74.4
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 6.7e-48 194.5 131 67.2
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 8.8e-48 194.1 188 53.2
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 8.8e-48 194.1 172 59.9
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 8.8e-48 194.1 166 64.5
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 8.8e-48 194.1 152 64.5
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 1.1e-47 193.7 169 59.2
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 1.1e-47 193.7 182 58.8
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 1.1e-47 193.7 182 58.8
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.5e-47 193.4 171 57.9
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 2.0e-47 193.0 171 56.1
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.0e-47 193.0 171 61.4
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 3.3e-47 192.2 168 60.1
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 5.7e-47 191.4 146 63.7
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 7.4e-47 191.0 151 61.6
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 7.4e-47 191.0 120 71.7
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 9.7e-47 190.7 153 63.4
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 1.7e-46 189.9 121 71.1
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 2.8e-46 189.1 182 53.3
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 4.8e-46 188.3 158 60.8
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 1.8e-45 186.4 167 59.9
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 3.1e-45 185.7 186 52.7
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 2.6e-44 182.6 186 53.8
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 4.5e-44 181.8 111 73.9
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 3.8e-43 178.7 176 55.7
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 9.4e-42 174.1 182 52.7
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 4.7e-41 171.8 103 72.8
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 8.8e-40 167.5 112 67.9
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 6.3e-38 161.4 136 59.6
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 3.1e-37 159.1 184 51.1
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 4.1e-37 158.7 165 51.5
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.0e-35 154.1 128 57.0
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 1.9e-34 149.8 151 52.3
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 4.0e-32 142.1 176 44.3
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 4.4e-31 138.7 136 53.7
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 7.5e-31 137.9 110 55.5
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 9.8e-31 137.5 110 55.5
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 9.8e-31 137.5 142 50.0
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.7e-30 136.7 108 56.5
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 2.8e-30 136.0 171 47.4
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 3.7e-30 135.6 149 49.0
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 6.3e-30 134.8 105 59.0
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 1.1e-29 134.0 108 54.6
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 1.4e-29 133.7 105 54.3
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 2.4e-29 132.9 166 46.4
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 3.1e-29 132.5 136 50.0
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 7.0e-29 131.3 108 53.7
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.2e-28 130.6 143 46.9
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 1.2e-28 130.6 105 55.2
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.2e-28 130.6 108 54.6
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.6e-28 130.2 103 56.3
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.5e-28 129.0 134 48.5
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 4.5e-28 128.6 153 45.1
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 5.9e-28 128.3 104 55.8
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 7.7e-28 127.9 104 56.7
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 7.7e-28 127.9 129 50.4
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 1.0e-27 127.5 62 90.3
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 1.3e-27 127.1 123 49.6
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 1.3e-27 127.1 167 44.9
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 2.3e-27 126.3 105 55.2
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 2.9e-27 125.9 105 50.5
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 2.9e-27 125.9 135 46.7
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 2.9e-27 125.9 105 53.3
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 5.0e-27 125.2 108 50.9
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 1.5e-26 123.6 145 45.5
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 1.9e-26 123.2 142 49.3
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 2.5e-26 122.9 168 44.0
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 2.5e-26 122.9 103 53.4
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 3.3e-26 122.5 60 86.7
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 5.5e-26 121.7 106 49.1
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 9.5e-26 120.9 105 52.4
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 9.5e-26 120.9 105 52.4
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.6e-25 120.2 94 59.6
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 1.6e-25 120.2 135 43.7
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 4.7e-25 118.6 191 36.1
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 4.7e-25 118.6 167 43.1
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.4e-24 117.1 176 39.8
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 3.0e-24 115.9 165 43.6
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 3.0e-24 115.9 126 45.2
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.2e-23 114.0 165 42.4
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.5e-23 113.6 105 47.6
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.6e-23 112.8 170 40.0
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.4e-23 112.5 155 41.9
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 3.4e-23 112.5 102 54.9
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 1.3e-22 110.5 181 37.0
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 4.9e-22 108.6 177 35.0
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 6.3e-22 108.2 164 40.9
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 8.3e-22 107.8 106 46.2
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 1.8e-21 106.7 88 55.7
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.8e-21 106.7 157 40.8
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 3.5e-20 102.4 169 36.7
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 3.5e-20 102.4 133 47.4
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 4.5e-20 102.1 61 72.1
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 3.8e-19 99.0 142 41.5
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 5.0e-19 98.6 113 44.2
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 5.0e-19 98.6 113 44.2
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 5.0e-19 98.6 59 69.5
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 7.3e-18 94.7 253 30.8
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 4.7e-17 92.0 136 39.0
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 1.8e-16 90.1 91 46.2
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 1.2e-15 87.4 104 51.0
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 2.6e-15 86.3 59 61.0
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 3.4e-15 85.9 276 28.3
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.0e-11 74.3 78 46.2
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 2.1e-09 66.6 94 36.2
Mapoly0021s0016 Marchantia polymorpha HOM05D003884 ORTHO05D004482 6.2e-09 65.1 129 30.2
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 1.3e-06 57.4 101 39.6
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 6.4e-06 55.1 64 43.8


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