Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 8.1e-76 287.0 141 100.0
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 6.4e-73 277.3 136 100.0
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.1e-71 272.3 156 88.5
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.1e-68 262.3 156 87.2
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 2.9e-65 251.9 156 82.7
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 7.1e-48 194.1 135 71.1
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 1.3e-44 183.3 155 59.4
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 4.8e-44 181.4 156 59.0
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 1.1e-43 180.3 156 58.3
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 5.3e-43 177.9 155 56.1
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 6.9e-43 177.6 135 63.7
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 7.6e-42 174.1 155 54.2
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 7.6e-42 174.1 135 63.0
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 1.3e-41 173.3 135 61.5
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 3.8e-41 171.8 133 63.9
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 4.9e-41 171.4 135 62.2
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 6.5e-41 171.0 154 57.1
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 1.1e-40 170.2 154 55.8
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.1e-40 170.2 154 55.8
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 1.4e-40 169.9 157 57.3
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 1.9e-40 169.5 154 57.1
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 3.2e-40 168.7 154 55.8
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 4.2e-40 168.3 136 59.6
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 1.6e-39 166.4 155 56.1
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 3.5e-39 165.2 134 58.2
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 4.6e-39 164.9 135 58.5
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 4.6e-39 164.9 154 54.5
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 6.0e-39 164.5 154 52.6
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 6.0e-39 164.5 136 59.6
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 7.9e-39 164.1 135 58.5
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 1.0e-38 163.7 134 59.0
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.8e-38 162.9 134 57.5
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 2.3e-38 162.5 134 58.2
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 3.0e-38 162.2 135 62.2
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 3.9e-38 161.8 136 60.3
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 5.1e-38 161.4 134 60.4
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 5.1e-38 161.4 157 53.5
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 5.1e-38 161.4 137 62.8
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 5.1e-38 161.4 138 63.0
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 6.7e-38 161.0 135 63.0
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 6.7e-38 161.0 135 55.6
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 8.7e-38 160.6 155 54.2
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 8.7e-38 160.6 141 58.9
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 1.9e-37 159.5 134 59.7
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 1.9e-37 159.5 129 62.0
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 2.5e-37 159.1 136 59.6
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 4.3e-37 158.3 154 50.6
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 5.7e-37 157.9 138 60.1
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 5.7e-37 157.9 138 55.1
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 4.8e-36 154.8 135 56.3
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 6.3e-36 154.5 136 57.4
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 6.3e-36 154.5 136 58.1
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 8.2e-36 154.1 135 58.5
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 8.2e-36 154.1 135 58.5
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.1e-35 153.7 154 50.0
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 2.4e-35 152.5 141 52.5
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 4.1e-35 151.8 136 55.9
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 4.1e-35 151.8 135 55.6
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 9.0e-35 150.6 136 56.6
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 2.0e-34 149.4 141 53.2
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 2.0e-34 149.4 137 55.5
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 4.5e-34 148.3 134 54.5
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 5.9e-34 147.9 137 55.5
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 7.6e-34 147.5 136 55.9
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 7.6e-34 147.5 154 47.4
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 1.7e-33 146.4 135 51.9
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 2.9e-33 145.6 136 50.0
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 3.8e-33 145.2 134 51.5
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 6.5e-33 144.4 154 46.8
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 6.5e-33 144.4 134 52.2
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 1.9e-32 142.9 154 46.8
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 2.5e-32 142.5 155 46.5
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 2.5e-32 142.5 154 47.4
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 4.2e-32 141.7 154 46.1
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 9.3e-32 140.6 135 52.6
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 1.6e-31 139.8 134 51.5
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 2.1e-31 139.4 137 55.5
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 2.7e-31 139.0 154 44.8
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 2.7e-31 139.0 154 45.5
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 2.7e-31 139.0 134 49.3
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 1.3e-30 136.7 134 49.3
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 1.3e-30 136.7 134 49.3
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 1.3e-30 136.7 154 44.8
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 3.9e-30 135.2 135 51.9
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 1.1e-29 133.7 134 48.5
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 3.3e-29 132.1 133 47.4
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 1.3e-28 130.2 153 47.1
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 2.2e-28 129.4 191 38.7
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 1.1e-27 127.1 133 46.6
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 6.9e-27 124.4 139 51.1
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 9.1e-27 124.0 135 48.1
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 1.2e-26 123.6 133 45.1
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 1.2e-26 123.6 134 51.5
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 1.5e-26 123.2 139 50.4
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 3.4e-26 122.1 138 51.4
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.4e-26 122.1 138 51.4
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.0e-25 120.6 139 50.4
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.2e-25 119.4 139 51.1
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 6.5e-25 117.9 135 45.2
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 8.5e-25 117.5 138 49.3
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.2e-24 115.5 136 50.7
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 2.2e-20 102.8 134 45.5
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 2.0e-18 96.3 121 43.0
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 2.6e-13 79.3 87 54.0
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 7.4e-13 77.8 84 53.6
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 4.8e-12 75.1 82 40.2
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 3.1e-11 72.4 88 46.6
FAN27G0866 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.0e-10 69.7 63 54.0
FAN24G2079 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.0e-06 57.4 77 45.5
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 2.3e-06 56.2 29 72.4


User provided reference genes

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