Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 3.9e-128 461.5 232 100.0
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.0e-119 432.6 232 94.4
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.7e-118 429.5 238 92.0
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 8.2e-118 427.2 233 93.1
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 1.6e-116 422.9 234 93.6
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 8.0e-105 384.0 233 83.7
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 5.4e-77 291.6 234 64.1
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 1.2e-71 273.9 235 61.7
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 2.1e-68 263.1 233 60.1
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 1.8e-64 250.0 235 60.0
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 4.0e-64 248.8 236 58.1
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 2.0e-63 246.5 237 57.8
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 2.0e-63 246.5 237 57.8
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 2.9e-62 242.7 244 56.1
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.9e-62 242.7 140 90.7
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 1.9e-61 240.0 240 55.4
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 7.1e-61 238.0 238 57.6
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 7.1e-61 238.0 244 54.1
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 7.1e-61 238.0 237 54.9
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.2e-60 237.3 238 57.6
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 1.2e-60 237.3 231 58.4
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 2.7e-60 236.1 237 55.3
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 7.8e-60 234.6 237 57.0
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 3.0e-59 232.6 246 51.6
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 1.1e-58 230.7 232 56.5
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 1.1e-58 230.7 233 52.8
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 1.9e-58 229.9 239 54.8
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 2.5e-58 229.6 239 54.8
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 3.3e-58 229.2 241 53.5
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 5.6e-58 228.4 246 51.2
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 7.3e-58 228.0 237 54.9
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 9.6e-58 227.6 243 53.9
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 2.1e-57 226.5 242 52.5
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 4.7e-57 225.3 246 50.8
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 1.1e-56 224.2 243 53.5
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 1.4e-56 223.8 232 53.4
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 1.8e-56 223.4 231 51.5
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 3.1e-56 222.6 240 52.9
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 3.1e-56 222.6 211 58.8
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 4.0e-56 222.2 217 55.3
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 4.0e-56 222.2 237 54.9
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 6.9e-56 221.5 232 53.9
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 1.5e-55 220.3 245 53.1
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 3.4e-55 219.2 245 51.0
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 4.4e-55 218.8 235 52.8
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 2.2e-54 216.5 238 54.6
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 2.2e-54 216.5 238 54.6
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 2.9e-54 216.1 237 52.7
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 3.8e-54 215.7 239 53.6
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 3.8e-54 215.7 241 51.5
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 4.9e-54 215.3 241 51.9
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 6.4e-54 214.9 247 51.0
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 8.4e-54 214.5 238 52.1
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 8.4e-54 214.5 199 56.3
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 8.4e-54 214.5 241 51.5
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 8.4e-54 214.5 243 51.0
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 1.4e-53 213.8 259 49.0
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 1.9e-53 213.4 242 51.7
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 2.4e-53 213.0 242 52.5
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 4.2e-53 212.2 236 50.4
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 7.1e-53 211.5 233 52.4
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 1.6e-52 210.3 230 53.0
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 2.1e-52 209.9 238 49.6
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 2.7e-52 209.5 216 53.7
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 2.7e-52 209.5 158 69.6
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 2.7e-52 209.5 228 51.3
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 3.5e-52 209.1 242 48.8
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 6.0e-52 208.4 257 49.0
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 1.0e-51 207.6 238 50.8
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 1.3e-51 207.2 234 50.9
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 2.3e-51 206.5 241 49.4
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 8.7e-51 204.5 238 48.7
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 8.7e-51 204.5 233 50.6
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 1.1e-50 204.1 240 50.8
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 1.5e-50 203.8 239 51.0
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 1.9e-50 203.4 223 49.3
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 1.9e-50 203.4 234 46.2
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 2.5e-50 203.0 239 51.5
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 2.5e-50 203.0 237 51.5
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 3.3e-50 202.6 241 49.4
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 4.3e-50 202.2 238 50.0
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 7.3e-50 201.4 233 47.2
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 7.3e-50 201.4 238 48.7
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 9.6e-50 201.1 237 50.6
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 2.1e-49 199.9 245 47.8
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 2.1e-49 199.9 234 48.3
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 2.1e-49 199.9 237 50.2
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 3.6e-49 199.1 243 48.6
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 6.2e-49 198.4 228 48.2
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 6.2e-49 198.4 236 45.8
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 8.1e-49 198.0 248 48.8
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 1.1e-48 197.6 235 49.8
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 1.1e-48 197.6 235 49.8
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 1.1e-48 197.6 223 48.9
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 1.4e-48 197.2 241 49.8
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 1.8e-48 196.8 236 50.0
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 3.1e-48 196.1 237 48.5
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 4.0e-48 195.7 216 51.4
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 4.0e-48 195.7 231 46.8
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 5.3e-48 195.3 231 48.1
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 6.9e-48 194.9 212 50.5
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 1.2e-47 194.1 249 45.4
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 1.2e-47 194.1 214 49.1
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 2.0e-47 193.4 241 47.7
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 2.0e-47 193.4 231 48.1
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 3.4e-47 192.6 211 50.2
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 4.5e-47 192.2 241 46.1
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 7.6e-47 191.4 242 48.8
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 3.8e-46 189.1 211 49.8
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 4.9e-46 188.7 238 46.6
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 1.1e-45 187.6 155 60.0
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 1.4e-45 187.2 238 46.6
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 1.4e-45 187.2 238 45.4
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 1.9e-45 186.8 243 46.1
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 1.9e-45 186.8 156 59.0
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 2.4e-45 186.4 189 57.1
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 2.4e-45 186.4 231 45.9
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 3.2e-45 186.0 217 50.2
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 4.2e-45 185.7 238 47.5
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 9.3e-45 184.5 242 47.9
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 2.1e-44 183.3 231 45.0
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 2.7e-44 183.0 231 47.6
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 6.0e-44 181.8 245 43.3
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 1.8e-43 180.3 246 44.3
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 1.1e-42 177.6 231 44.6
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 4.3e-42 175.6 170 57.6
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 1.1e-40 171.0 231 44.2
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 1.4e-40 170.6 216 46.3
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 2.4e-40 169.9 256 41.8
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 5.3e-40 168.7 136 61.8
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 4.5e-39 165.6 151 56.3
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 5.8e-39 165.2 240 43.3
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 5.8e-39 165.2 232 45.7
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 1.7e-38 163.7 207 44.0
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 1.9e-34 150.2 153 54.9
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.4e-32 144.1 242 40.9
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 2.4e-32 143.3 245 39.6
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 5.8e-31 138.7 249 37.8
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 3.2e-29 132.9 205 40.5
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 9.3e-29 131.3 134 50.0
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 3.7e-25 119.4 64 87.5
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 6.9e-24 115.2 235 36.6
Dinv28349 Davidia involucrata HOM05D004719 ORTHO05D005519 2.0e-23 113.6 81 66.7
QL04p064474 Quercus lobata HOM05D000013 ORTHO05D000011 5.5e-21 105.5 58 79.3
FvH4_7g16570 Fragaria vesca HOM05D004719 ORTHO05D005519 1.2e-20 104.4 56 85.7
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 1.2e-20 104.4 54 90.7
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 7.9e-20 101.7 201 38.8
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 9.7e-18 94.7 140 45.7
BolC3t14188H Brassica oleracea HOM05D004719 ORTHO05D005519 2.0e-15 87.0 97 51.5
FvH4_6g34200 Fragaria vesca HOM05D004719 ORTHO05D005519 3.4e-15 86.3 46 87.0
FAN16G3662 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.9e-13 80.5 49 79.6
Solyc06g036500.1 Solanum lycopersicum HOM05D004719 ORTHO05D005519 7.2e-13 78.6 76 51.3
CDE09G0250 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 7.9e-12 75.1 50 64.0
FAN06G3132 Fragaria x ananassa HOM05D004719 ORTHO05D005519 8.8e-11 71.6 45 75.6
CBR_g84869 Chara braunii HOM05D004719 ORTHO05D005519 2.2e-09 67.0 59 55.9
Hund30245 Selenicereus undatus HOM05D004719 ORTHO05D005519 6.3e-09 65.5 100 45.0
CBR_g83324 Chara braunii HOM05D004719 ORTHO05D005519 7.0e-08 62.0 68 41.2
FAN25G3581 Fragaria x ananassa HOM05D017504 ORTHO05D022678 4.5e-07 59.3 30 90.0


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