Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 5.6e-147 524.2 262 100.0
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 5.6e-147 524.2 262 100.0
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.2e-144 516.5 265 98.1
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 4.9e-143 511.1 262 97.7
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 1.1e-134 483.4 263 94.7
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 1.5e-115 419.9 257 81.3
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 2.0e-112 409.5 258 81.4
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 3.4e-112 408.7 254 80.3
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 4.5e-112 408.3 259 78.8
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 6.4e-111 404.4 257 77.8
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 2.3e-108 396.0 251 80.1
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.5e-107 393.3 258 77.1
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 2.5e-107 392.5 259 77.2
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 3.3e-107 392.1 258 75.6
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 4.3e-107 391.7 245 77.1
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 9.6e-107 390.6 257 76.3
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 9.6e-107 390.6 247 77.3
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 8.2e-106 387.5 252 78.2
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 1.1e-105 387.1 256 75.0
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 2.4e-105 386.0 257 74.7
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 5.3e-105 384.8 247 76.5
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 1.2e-104 383.6 255 74.9
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 3.4e-104 382.1 249 78.3
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 4.5e-104 381.7 230 79.6
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 5.8e-104 381.3 255 76.9
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 7.6e-104 380.9 231 83.1
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 1.0e-103 380.6 255 76.5
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 1.0e-103 380.6 256 75.8
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.7e-103 379.8 243 77.8
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 1.7e-103 379.8 251 76.9
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 2.2e-103 379.4 255 76.1
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 3.8e-103 378.6 255 74.9
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 3.8e-103 378.6 255 74.9
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 8.4e-103 377.5 257 73.2
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 8.4e-103 377.5 257 71.6
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 1.1e-102 377.1 239 77.4
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.4e-102 376.7 254 76.4
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 2.5e-102 375.9 247 75.3
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 5.5e-102 374.8 244 76.2
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 7.1e-102 374.4 258 73.6
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 9.3e-102 374.0 243 75.7
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 1.6e-101 373.2 222 83.8
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 1.6e-101 373.2 229 80.3
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 2.1e-101 372.9 263 72.2
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 3.5e-101 372.1 232 78.4
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 4.6e-101 371.7 254 72.0
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 1.8e-100 369.8 259 73.4
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 2.3e-100 369.4 257 73.5
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 6.7e-100 367.9 254 71.3
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 8.7e-100 367.5 254 73.2
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 8.7e-100 367.5 246 73.2
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 1.1e-99 367.1 270 70.4
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 5.7e-99 364.8 246 74.4
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.6e-98 363.2 244 73.8
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 2.2e-98 362.8 234 76.1
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 3.7e-98 362.1 231 77.1
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 6.3e-98 361.3 270 67.8
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 6.3e-98 361.3 271 69.0
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 6.3e-98 361.3 229 75.5
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 8.2e-98 360.9 247 73.3
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 1.4e-97 360.1 261 70.1
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.4e-97 359.4 266 70.3
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 3.1e-97 359.0 266 70.3
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 4.1e-97 358.6 266 68.8
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.2e-96 357.1 255 71.4
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 2.6e-96 355.9 241 71.8
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 2.6e-96 355.9 265 68.7
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 2.6e-96 355.9 264 67.8
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 2.6e-96 355.9 262 69.1
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 4.5e-96 355.1 241 72.2
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 4.5e-96 355.1 237 73.8
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 5.9e-96 354.8 255 70.6
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.0e-95 354.0 259 69.1
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 2.9e-95 352.4 264 68.2
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.1e-94 350.5 271 66.1
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 1.4e-94 350.1 267 67.0
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 1.4e-94 350.1 267 67.0
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 2.5e-94 349.4 258 69.0
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 3.2e-94 349.0 259 69.5
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 4.2e-94 348.6 241 71.0
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 5.5e-94 348.2 269 66.9
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 7.2e-94 347.8 243 71.2
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 2.1e-93 346.3 212 80.2
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 2.7e-93 345.9 251 66.9
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 7.9e-93 344.4 230 70.4
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 1.1e-91 340.5 233 72.5
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 1.5e-91 340.1 247 67.2
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 2.5e-91 339.3 335 56.1
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 1.3e-90 337.0 237 71.3
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 1.3e-90 337.0 213 76.5
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 1.7e-90 336.7 216 77.3
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.1e-89 334.0 297 58.9
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 1.8e-89 333.2 208 77.9
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 3.1e-89 332.4 235 71.9
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 4.1e-89 332.0 211 79.1
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 1.2e-88 330.5 210 75.2
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 3.4e-88 328.9 208 76.0
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 3.4e-88 328.9 215 77.2
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 3.6e-85 318.9 198 78.8
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 5.1e-84 315.1 199 79.4
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 5.2e-76 288.5 201 68.7
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 9.7e-75 284.3 335 51.0
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 2.7e-69 266.2 227 60.8
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 8.8e-68 261.2 167 79.6
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 1.2e-67 260.8 174 74.1
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 2.9e-63 246.1 227 54.6
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 8.0e-61 238.0 235 50.6
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 1.3e-58 230.7 245 50.6
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 3.1e-57 226.1 152 71.7
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 2.8e-53 213.0 230 50.9
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 1.0e-52 211.1 136 77.2
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.0e-47 194.5 137 71.5
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 1.1e-46 191.0 146 69.2
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 3.3e-46 189.5 148 66.2
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 5.6e-46 188.7 146 68.5
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 2.2e-42 176.8 175 56.6
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 4.9e-42 175.6 117 76.1
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.6e-40 170.6 116 71.6
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 3.6e-37 159.5 125 67.2
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 1.1e-33 147.9 96 72.9
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 1.6e-32 144.1 95 74.7
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 2.3e-31 140.2 75 88.0
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 2.2e-26 123.6 94 66.0
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.4e-20 104.4 127 48.8
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 5.1e-15 85.9 47 76.6
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.4e-12 77.8 171 29.2
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 1.8e-12 77.4 114 44.7
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 1.5e-11 74.3 114 43.9


User provided reference genes

Program Settings