Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.7e-115 419.1 278 100.0
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.3e-114 416.8 278 99.6
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.1e-99 366.3 264 95.5
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.3e-97 359.0 279 91.8
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 6.2e-96 354.8 284 89.1
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 7.9e-91 337.8 278 89.2
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 2.5e-76 289.7 211 99.5
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 5.1e-66 255.4 283 73.1
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 5.0e-61 238.8 283 68.2
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 9.7e-57 224.6 284 69.4
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 1.2e-46 191.0 279 64.2
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 1.2e-46 191.0 287 62.7
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 5.7e-41 172.2 287 59.6
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 7.5e-41 171.8 286 59.4
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 6.3e-40 168.7 281 60.9
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 1.6e-38 164.1 282 60.3
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 2.7e-38 163.3 287 58.5
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 7.7e-38 161.8 287 57.1
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 1.3e-37 161.0 283 49.1
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 1.1e-36 157.9 285 60.0
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 1.5e-36 157.5 288 60.8
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 4.2e-36 156.0 296 58.4
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 7.2e-36 155.2 279 58.1
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 2.3e-34 150.2 291 56.7
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 4.0e-34 149.4 279 59.1
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 4.0e-34 149.4 278 58.3
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 5.2e-34 149.1 284 56.7
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 8.8e-34 148.3 283 57.2
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 1.5e-33 147.5 279 58.1
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 1.5e-33 147.5 280 56.4
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.0e-33 147.1 283 58.3
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 3.4e-33 146.4 279 57.0
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 9.8e-33 144.8 281 56.2
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 9.8e-33 144.8 281 56.2
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 3.7e-32 142.9 287 56.8
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 8.3e-32 141.7 278 58.3
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 8.3e-32 141.7 279 57.3
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 8.3e-32 141.7 282 57.4
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 1.8e-31 140.6 277 37.2
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 4.1e-31 139.4 282 56.7
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 9.1e-31 138.3 278 56.8
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 1.2e-30 137.9 289 56.1
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 1.6e-30 137.5 287 55.4
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 1.6e-30 137.5 282 56.4
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 7.7e-30 135.2 285 55.8
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 1.0e-29 134.8 281 55.2
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 1.0e-29 134.8 280 52.9
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 1.7e-29 134.0 238 60.9
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 3.8e-29 132.9 285 55.4
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 8.6e-29 131.7 262 55.3
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 1.5e-28 131.0 287 54.7
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 4.2e-28 129.4 255 43.5
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 9.5e-28 128.3 236 54.2
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 1.2e-27 127.9 284 53.9
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 6.1e-27 125.6 286 53.8
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 4.0e-26 122.9 233 61.8
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 8.9e-26 121.7 283 55.1
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 9.8e-25 118.2 284 53.5
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 1.3e-24 117.9 282 54.3
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 1.3e-24 117.9 282 47.5
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 2.8e-24 116.7 282 54.6
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 6.3e-24 115.5 278 52.5
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 1.8e-23 114.0 249 56.2
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 2.4e-23 113.6 287 50.9
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 7.0e-23 112.1 149 53.0
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 7.0e-23 112.1 278 52.2
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 9.2e-23 111.7 319 48.6
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.2e-22 111.3 283 51.6
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 2.0e-22 110.5 279 51.6
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 3.5e-22 109.8 292 51.7
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 4.5e-22 109.4 116 50.9
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 7.8e-22 108.6 260 54.2
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 5.0e-21 105.9 291 50.9
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 8.6e-21 105.1 296 51.7
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 8.6e-21 105.1 294 48.6
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 1.1e-20 104.8 286 46.9
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 1.9e-20 104.0 275 52.4
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 2.5e-20 103.6 240 56.7
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 2.5e-20 103.6 283 46.3
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 7.3e-20 102.1 149 51.0
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 7.3e-20 102.1 281 53.0
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 9.5e-20 101.7 100 56.0
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 9.5e-20 101.7 100 56.0
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 1.2e-19 101.3 283 51.6
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.8e-18 97.4 154 49.4
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 4.0e-18 96.3 277 51.6
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 6.8e-18 95.5 275 52.7
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 6.8e-18 95.5 275 52.7
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 6.8e-18 95.5 131 42.7
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 8.9e-18 95.1 152 49.3
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 2.6e-17 93.6 310 36.1
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 3.4e-17 93.2 304 48.7
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 4.4e-17 92.8 103 50.5
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 5.8e-17 92.4 289 49.8
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 4.9e-16 89.4 145 42.8
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 2.0e-14 84.0 293 50.2
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 2.7e-14 83.6 282 48.2
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 4.6e-14 82.8 293 50.2
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 7.8e-14 82.0 109 47.7
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 5.0e-13 79.3 206 51.0
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 2.3e-10 70.5 121 43.8
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 8.9e-10 68.6 184 56.0
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 2.6e-09 67.0 107 41.1
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 3.4e-09 66.6 299 41.5
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 5.4e-07 59.3 43 55.8
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 6.0e-06 55.8 33 66.7


User provided reference genes

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