Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G0829 Fragaria x ananassa HOM05D035335 ORTHO05D029503 1.6e-80 302.8 162 100.0
FvH4_7g22220 Fragaria vesca HOM05D035335 ORTHO05D029503 6.2e-80 300.8 162 99.4
FAN01G2768 Fragaria x ananassa HOM05D035335 ORTHO05D029503 7.1e-60 234.2 162 82.7
FAN01G1489 Fragaria x ananassa HOM05D002366 ORTHO05D002499 5.1e-42 174.9 136 72.8
RcHm_v2.0_Chr1g0366601 Rosa chinensis HOM05D002366 ORTHO05D029503 1.4e-39 166.8 170 59.4
Prupe.2G234100 Prunus persica HOM05D002366 ORTHO05D002499 3.0e-18 95.9 168 41.7
FvH4_7g22210 Fragaria vesca HOM05D002366 ORTHO05D002499 2.7e-14 82.8 160 35.6
FAN06G1604 Fragaria x ananassa HOM05D002366 ORTHO05D002499 2.7e-14 82.8 160 35.6
MD01G1126800 Malus domestica HOM05D002366 ORTHO05D002499 5.9e-14 81.6 159 36.5
Prupe.2G234000 Prunus persica HOM05D002366 ORTHO05D002499 7.7e-14 81.3 160 36.2
FAN01G0260 Fragaria x ananassa HOM05D002366 ORTHO05D002499 2.9e-13 79.3 160 35.0
Duzib114G1053 Durio zibethinus HOM05D002366 ORTHO05D002499 5.0e-13 78.6 157 34.4
Prupe.2G233700 Prunus persica HOM05D002366 ORTHO05D002499 1.5e-12 77.0 155 34.8
FvH4_7g22201 Fragaria vesca HOM05D002366 ORTHO05D002499 7.2e-12 74.7 161 34.2
FAN06G2917 Fragaria x ananassa HOM05D002366 ORTHO05D002499 7.2e-12 74.7 161 34.2
Thecc.10G043700 Theobroma cacao HOM05D002366 ORTHO05D002499 7.2e-12 74.7 159 34.0
RcHm_v2.0_Chr1g0366621 Rosa chinensis HOM05D030075 ORTHO05D029402 9.5e-12 74.3 172 33.7
Solyc04g011480.3 Solanum lycopersicum HOM05D002366 ORTHO05D002499 1.6e-11 73.6 155 35.5
Cc02_g07950 Coffea canephora HOM05D002366 ORTHO05D002499 2.1e-11 73.2 156 35.9
Sopen04g005660 Solanum pennellii HOM05D002366 ORTHO05D002499 3.6e-11 72.4 155 35.5
Potri.010G204700 Populus trichocarpa HOM05D002366 ORTHO05D002499 4.7e-11 72.0 159 32.7
PGSC0003DMG400027749 Solanum tuberosum HOM05D002366 ORTHO05D002499 4.7e-11 72.0 155 34.8
MELO3C021645.2 Cucumis melo HOM05D002366 ORTHO05D002499 8.0e-11 71.2 157 31.8
CSS0010618 Camellia sinensis var. sinensis HOM05D002366 ORTHO05D002499 1.8e-10 70.1 156 34.0
Sabra10G0158300 Salix brachista HOM05D002366 ORTHO05D002499 1.8e-10 70.1 157 33.1
FAN03G0063 Fragaria x ananassa HOM05D002366 ORTHO05D002499 2.3e-10 69.7 163 33.1
Oeu048250.1 Olea europaea HOM05D002366 ORTHO05D002499 3.0e-10 69.3 155 31.0
BcaC02g07399 Brassica carinata HOM05D002366 ORTHO05D002499 4.0e-10 68.9 158 31.6
CsaV3_5G026540 Cucumis sativus L. HOM05D002366 ORTHO05D002499 4.0e-10 68.9 156 32.7
FAN01G1305 Fragaria x ananassa HOM05D002366 ORTHO05D002499 4.0e-10 68.9 161 33.5
FvH4_7g22230 Fragaria vesca HOM05D030075 ORTHO05D029402 5.2e-10 68.6 168 35.1
RcHm_v2.0_Chr1g0366591 Rosa chinensis HOM05D002366 ORTHO05D002499 8.8e-10 67.8 160 33.1
PGSC0003DMG400027748 Solanum tuberosum HOM05D002366 ORTHO05D002499 8.8e-10 67.8 154 34.4
BcaB06g29095 Brassica carinata HOM05D002366 ORTHO05D002499 1.2e-09 67.4 158 32.3
Haze_17057 Corylus avellana HOM05D002366 ORTHO05D002499 1.2e-09 67.4 168 32.7
Sabra10G0158200 Salix brachista HOM05D002366 ORTHO05D002499 1.2e-09 67.4 157 33.1
Dinv26005 Davidia involucrata HOM05D002366 ORTHO05D002499 1.5e-09 67.0 156 35.9
Sopen04g005670 Solanum pennellii HOM05D002366 ORTHO05D002499 2.0e-09 66.6 156 34.6
Prupe.2G233900 Prunus persica HOM05D002366 ORTHO05D002499 2.6e-09 66.2 161 30.4
C04p67400 Brassica napus HOM05D002366 ORTHO05D002499 4.4e-09 65.5 151 32.5
Peaxi162Scf00760g00219 Petunia axillaris HOM05D002366 ORTHO05D002499 4.4e-09 65.5 157 35.0
CAN.G786.13 Capsicum annuum HOM05D002366 ORTHO05D002499 5.7e-09 65.1 154 34.4
MELO3C021643.2 Cucumis melo HOM05D002366 ORTHO05D002499 5.7e-09 65.1 155 31.0
FAN06G2263 Fragaria x ananassa HOM05D002366 ORTHO05D002499 5.7e-09 65.1 152 32.9
FAN06G4888 Fragaria x ananassa HOM05D002366 ORTHO05D002499 5.7e-09 65.1 137 35.8
RcHm_v2.0_Chr1g0366551 Rosa chinensis HOM05D002366 ORTHO05D002499 5.7e-09 65.1 160 31.9
CANSAT56G4267 Cannabis sativa HOM05D002366 ORTHO05D002499 7.5e-09 64.7 156 32.1
MELO3C033579.2 Cucumis melo HOM05D002366 ORTHO05D002499 7.5e-09 64.7 163 33.1
FAN03G1080 Fragaria x ananassa HOM05D002366 ORTHO05D002499 7.5e-09 64.7 156 30.8
Solyc04g011490.4 Solanum lycopersicum HOM05D002366 ORTHO05D002499 7.5e-09 64.7 156 34.0
FvH4_7g22200 Fragaria vesca HOM05D002366 ORTHO05D002499 9.8e-09 64.3 156 30.8
FAN06G1701 Fragaria x ananassa HOM05D002366 ORTHO05D002499 9.8e-09 64.3 156 30.8
AT2G39518 Arabidopsis thaliana HOM05D002366 ORTHO05D002499 1.3e-08 63.9 161 28.6
Thhalv10017310m.g Eutrema salsugineum HOM05D002366 ORTHO05D002499 1.3e-08 63.9 159 30.2
BcaB02g09112 Brassica carinata HOM05D002366 ORTHO05D002499 1.7e-08 63.5 159 29.6
Gohir.D10G226600 Gossypium hirsutum HOM05D002366 ORTHO05D002499 1.7e-08 63.5 159 32.1
Sed0019419 Sechium edule HOM05D002366 ORTHO05D002499 1.7e-08 63.5 162 34.6
CANSAT56G2475 Cannabis sativa HOM05D002366 ORTHO05D002499 2.2e-08 63.2 156 32.1
Carub.0004s2160 Capsella rubella HOM05D002366 ORTHO05D002499 2.8e-08 62.8 153 30.1
Dinv26006 Davidia involucrata HOM05D002366 ORTHO05D002499 2.8e-08 62.8 164 34.8
Gohir.D10G226300 Gossypium hirsutum HOM05D002366 ORTHO05D002499 3.7e-08 62.4 159 32.1
A04p30420 Brassica napus HOM05D002366 ORTHO05D002499 4.9e-08 62.0 151 31.1
CARHR134410 Cardamine hirsuta HOM05D002366 ORTHO05D002499 4.9e-08 62.0 161 29.2
Medtr7g024750 Medicago truncatula HOM05D002366 ORTHO05D002499 4.9e-08 62.0 153 31.4
Sed0023282 Sechium edule HOM05D002366 ORTHO05D002499 6.3e-08 61.6 152 32.2
THA.LOC104810173 Tarenaya hassleriana HOM05D002366 ORTHO05D002499 6.3e-08 61.6 158 31.6
TWI38G1308 Tripterygium wilfordii HOM05D002366 ORTHO05D002499 6.3e-08 61.6 111 33.3
FAN01G2158 Fragaria x ananassa HOM05D002366 ORTHO05D002499 8.3e-08 61.2 156 30.1
AL4G36940 Arabidopsis lyrata HOM05D002366 ORTHO05D002499 1.1e-07 60.8 161 28.6
arahy.Tifrunner.gnm1.ann1.BG6DLE Arachis hypogaea HOM05D002366 ORTHO05D002499 1.1e-07 60.8 166 28.3
arahy.Tifrunner.gnm1.ann1.CW7JQJ Arachis hypogaea HOM05D002366 ORTHO05D002499 1.1e-07 60.8 166 28.3
BolC4t28238H Brassica oleracea HOM05D002366 ORTHO05D002499 1.1e-07 60.8 160 29.4
Peaxi162Scf00760g00218 Petunia axillaris HOM05D002366 ORTHO05D002499 1.1e-07 60.8 155 32.3
Prupe.2G233800 Prunus persica HOM05D002366 ORTHO05D002499 1.1e-07 60.8 157 29.3
SalBow6G6566 Salvia bowleyana HOM05D002366 ORTHO05D002499 1.1e-07 60.8 149 30.9
Sp4g21820 Schrenkiella parvula HOM05D002366 ORTHO05D002499 1.1e-07 60.8 158 28.5
AL4G36950 Arabidopsis lyrata HOM05D002366 ORTHO05D002499 1.4e-07 60.5 162 30.2
Dinv15677 Davidia involucrata HOM05D002366 ORTHO05D002499 1.8e-07 60.1 147 32.7
Thhalv10017305m.g Eutrema salsugineum HOM05D002366 ORTHO05D002499 1.8e-07 60.1 160 30.6
SalBow3G2180 Salvia bowleyana HOM05D002366 ORTHO05D002499 1.8e-07 60.1 150 31.3
Gorai.011G257400 Gossypium raimondii HOM05D002366 ORTHO05D002499 2.4e-07 59.7 159 31.4
Gohir.A10G217500 Gossypium hirsutum HOM05D002366 ORTHO05D002499 3.1e-07 59.3 159 31.4
SalBow6G6394 Salvia bowleyana HOM05D002366 ORTHO05D002499 3.1e-07 59.3 149 30.2
Carub.0004s2161 Capsella rubella HOM05D002366 ORTHO05D002499 4.1e-07 58.9 114 32.5
Cfa020652 Carpinus fangiana HOM05D002366 ORTHO05D002499 4.1e-07 58.9 152 34.2
CsaV3_5G026570 Cucumis sativus L. HOM05D002366 ORTHO05D002499 4.1e-07 58.9 151 27.8
Thecc.03G067200 Theobroma cacao HOM05D002366 ORTHO05D002499 4.1e-07 58.9 167 31.7
Ca_07285_v3 Cicer arietinum L. HOM05D002366 ORTHO05D002499 5.4e-07 58.5 154 31.8
DCAR_027633 Daucus carota HOM05D002366 ORTHO05D002499 5.4e-07 58.5 156 30.1
Dinv31454 Davidia involucrata HOM05D002366 ORTHO05D002499 5.4e-07 58.5 109 35.8
Eucgr.G02924 Eucalyptus grandis HOM05D002366 ORTHO05D002499 5.4e-07 58.5 160 28.8
Cfa001486 Carpinus fangiana HOM05D002366 ORTHO05D002499 7.0e-07 58.2 151 30.5
MSTRG.8245 Avicennia marina HOM05D002366 ORTHO05D002499 9.2e-07 57.8 139 28.8
BcaC02g12081 Brassica carinata HOM05D002366 ORTHO05D002499 9.2e-07 57.8 159 29.6
C04p08120 Brassica napus HOM05D002366 ORTHO05D002499 9.2e-07 57.8 159 29.6
BolC4t22422H Brassica oleracea HOM05D002366 ORTHO05D002499 9.2e-07 57.8 159 29.6
Glyma.02G092500 Glycine max HOM05D002366 ORTHO05D002499 9.2e-07 57.8 158 29.7
VMungo1383G2148 Vigna mungo HOM05D002366 ORTHO05D002499 9.2e-07 57.8 160 26.9
Sed0005662 Sechium edule HOM05D002366 ORTHO05D002499 1.2e-06 57.4 160 28.8
TPR.G15505 Trifolium pratense HOM05D002366 ORTHO05D002499 1.2e-06 57.4 112 31.2
BcaB06g29094 Brassica carinata HOM05D002366 ORTHO05D002499 1.6e-06 57.0 159 27.7
BraA04t18467Z Brassica rapa HOM05D002366 ORTHO05D002499 1.6e-06 57.0 153 32.0
GSVIVG01016541001 Vitis vinifera HOM05D002366 ORTHO05D002499 1.6e-06 57.0 158 31.6
Migut.F01504 Erythranthe guttata HOM05D002366 ORTHO05D002499 2.0e-06 56.6 108 32.4
Glyma.18G289800 Glycine max HOM05D002366 ORTHO05D002499 2.0e-06 56.6 158 28.5
Sp4g21830 Schrenkiella parvula HOM05D002366 ORTHO05D002499 2.7e-06 56.2 157 31.2
Atru.chr11.990 Acer truncatum HOM05D002366 ORTHO05D002499 3.5e-06 55.8 171 30.4
AT2G39530 Arabidopsis thaliana HOM05D002366 ORTHO05D002499 3.5e-06 55.8 146 30.1
Lalb_Chr17g0336171 Lupinus albus HOM05D002366 ORTHO05D002499 3.5e-06 55.8 163 30.1
ClCG09G019910 Citrullus lanatus HOM05D002366 ORTHO05D002499 4.5e-06 55.5 174 28.2
SalBow6G5537 Salvia bowleyana HOM05D002366 ORTHO05D002499 4.5e-06 55.5 161 30.4
TPR.G15520 Trifolium pratense HOM05D002366 ORTHO05D002499 4.5e-06 55.5 154 31.2
Migut.I00570 Erythranthe guttata HOM05D002366 ORTHO05D002499 5.9e-06 55.1 147 34.0
Cc02_g07930 Coffea canephora HOM05D002366 ORTHO05D002499 7.7e-06 54.7 159 31.4


User provided reference genes

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