Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G0296 Fragaria x ananassa HOM05D004392 ORTHO05D004846 0.0e+00 3725.6 1946 100.0
FAN06G0139 Fragaria x ananassa HOM05D004392 ORTHO05D004846 0.0e+00 3657.8 1947 98.4
FvH4_7g17640 Fragaria vesca HOM05D004392 ORTHO05D004846 0.0e+00 3644.7 1923 99.1
FAN03G2506 Fragaria x ananassa HOM05D004392 ORTHO05D004846 0.0e+00 3527.3 1947 94.3
FAN10G1489 Fragaria x ananassa HOM05D004392 ORTHO05D004846 0.0e+00 3507.2 1950 93.8
FAN10G3859 Fragaria x ananassa HOM05D004392 ORTHO05D004846 0.0e+00 3490.7 1936 94.0
FAN01G0919 Fragaria x ananassa HOM05D004392 ORTHO05D004846 0.0e+00 3438.7 1923 93.7
RcHm_v2.0_Chr1g0361071 Rosa chinensis HOM05D004392 ORTHO05D004846 0.0e+00 3158.2 1946 86.6
Prupe.2G197500 Prunus persica HOM05D004392 ORTHO05D004846 0.0e+00 2885.5 1940 79.1
MD07G1159400 Malus domestica HOM05D004392 ORTHO05D004846 0.0e+00 2841.6 1949 77.1
QL08p047226 Quercus lobata HOM05D004392 ORTHO05D004846 0.0e+00 2420.2 1983 66.5
Cfa003736 Carpinus fangiana HOM05D004392 ORTHO05D004846 0.0e+00 2402.9 1955 67.1
Thecc.01G333400 Theobroma cacao HOM05D004392 ORTHO05D004846 0.0e+00 2369.0 1968 65.2
GSVIVG01027438001 Vitis vinifera HOM05D004392 ORTHO05D004846 0.0e+00 2367.0 1951 65.8
Potri.014G105601 Populus trichocarpa HOM05D004392 ORTHO05D004846 0.0e+00 2352.0 1961 65.8
Atru.chr5.766 Acer truncatum HOM05D004392 ORTHO05D004846 0.0e+00 2346.6 2004 63.9
Haze_15733 Corylus avellana HOM05D004392 ORTHO05D004846 0.0e+00 2336.6 2110 62.1
Ciclev10018449m.g Citrus clementina HOM05D004392 ORTHO05D004846 0.0e+00 2332.4 1966 64.4
CiPaw.01G082300 Carya illinoinensis HOM05D004392 ORTHO05D004846 0.0e+00 2323.9 2000 64.5
Sabra14G0077700 Salix brachista HOM05D004392 ORTHO05D004846 0.0e+00 2319.3 1957 65.3
Gohir.D12G120100 Gossypium hirsutum HOM05D004392 ORTHO05D004846 0.0e+00 2318.1 1966 63.8
Gohir.A12G116600 Gossypium hirsutum HOM05D004392 ORTHO05D004846 0.0e+00 2312.7 1969 63.7
Gorai.008G130800 Gossypium raimondii HOM05D004392 ORTHO05D004846 0.0e+00 2308.5 1964 63.9
Manes.01G240000 Manihot esculenta HOM05D004392 ORTHO05D004846 0.0e+00 2304.6 2002 63.4
TWI59G0442 Tripterygium wilfordii HOM05D004392 ORTHO05D004846 0.0e+00 2265.0 1984 62.7
COL.COLO4_23048 Corchorus olitorius HOM05D004392 ORTHO05D004846 0.0e+00 2192.5 1932 62.4
Lj3g0000602 Lotus japonicus HOM05D004392 ORTHO05D004846 0.0e+00 2157.1 1946 60.8
Phvul.010G119400 Phaseolus vulgaris HOM05D004392 ORTHO05D004846 0.0e+00 2155.2 1967 60.3
Glyma.07G049700 Glycine max HOM05D004392 ORTHO05D004846 0.0e+00 2148.6 1947 60.5
Rhsim07G0000300 Rhododendron simsii HOM05D004392 ORTHO05D004846 0.0e+00 2146.3 2004 60.3
Duzib138G1478 Durio zibethinus HOM05D004392 ORTHO05D004846 0.0e+00 2141.7 1966 60.1
CSS0009785 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 0.0e+00 2132.5 1543 69.9
Glyma.16G018400 Glycine max HOM05D004392 ORTHO05D004846 0.0e+00 2126.3 1958 59.6
Ca_26063_v3 Cicer arietinum L. HOM05D004392 ORTHO05D004846 0.0e+00 2125.1 1959 60.5
arahy.Tifrunner.gnm1.ann1.9PW2R5 Arachis hypogaea HOM05D004392 ORTHO05D004846 0.0e+00 2119.4 1969 60.2
Eucgr.D02650 Eucalyptus grandis HOM05D004392 ORTHO05D004846 0.0e+00 2117.4 1821 62.8
CsaV3_3G007340 Cucumis sativus L. HOM05D004392 ORTHO05D004846 0.0e+00 2108.6 1987 58.7
TPR.G19826 Trifolium pratense HOM05D004392 ORTHO05D004846 0.0e+00 2107.4 1943 60.4
Sc01g0002200 Simmondsia chinensis HOM05D004392 ORTHO05D004846 0.0e+00 2106.3 2003 58.9
VMungo0331G0990 Vigna mungo HOM05D004392 ORTHO05D004846 0.0e+00 2105.9 2009 59.3
Lalb_Chr10g0100861 Lupinus albus HOM05D004392 ORTHO05D004846 0.0e+00 2101.6 1969 59.0
Actinidia08006 Actinidia chinensis HOM05D004392 ORTHO05D004846 0.0e+00 2100.9 1542 69.1
arahy.Tifrunner.gnm1.ann1.H04KSL Arachis hypogaea HOM05D004392 ORTHO05D004846 0.0e+00 2098.9 1890 61.1
PGR031G1055 Punica granatum HOM05D004392 ORTHO05D004846 0.0e+00 2097.8 1974 59.9
Hma1.2p1_0074F.1_g038710 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 0.0e+00 2090.8 1604 66.8
TAR636G2848 Trochodendron aralioides HOM05D004392 ORTHO05D004846 0.0e+00 2090.1 2019 58.3
Psat4g164000 Pisum sativum HOM05D004392 ORTHO05D004846 0.0e+00 2075.8 1952 60.5
MBI12_g11801_MAGBIO Magnolia biondii HOM05D004392 ORTHO05D004846 0.0e+00 2064.3 1997 58.7
THA.LOC104801349 Tarenaya hassleriana HOM05D004392 ORTHO05D004846 0.0e+00 2058.5 1970 59.0
Medtr8g024320 Medicago truncatula HOM05D004392 ORTHO05D004846 0.0e+00 2049.6 1931 60.4
ClCG05G000190 Citrullus lanatus HOM05D004392 ORTHO05D004846 0.0e+00 2014.2 1989 57.4
MELO3C005953.2 Cucumis melo HOM05D004392 ORTHO05D004846 0.0e+00 2000.3 2108 54.9
Sed0010760 Sechium edule HOM05D004392 ORTHO05D004846 0.0e+00 1992.2 1607 64.2
Aqoxy5G04345 Aquilegia oxysepala HOM05D004392 ORTHO05D004846 0.0e+00 1976.4 1981 56.5
Hund27149 Selenicereus undatus HOM05D004392 ORTHO05D004846 0.0e+00 1965.7 2068 54.9
Lj9C607G8 Lonicera japonica HOM05D004392 ORTHO05D004846 0.0e+00 1941.0 2128 54.0
AL6G52660 Arabidopsis lyrata HOM05D004392 ORTHO05D004846 0.0e+00 1938.7 1959 56.8
Carub.0006s3583 Capsella rubella HOM05D004392 ORTHO05D004846 0.0e+00 1935.6 1956 57.0
AT4G00800 Arabidopsis thaliana HOM05D004392 ORTHO05D004846 0.0e+00 1930.2 1951 56.9
Thhalv10028358m.g Eutrema salsugineum HOM05D004392 ORTHO05D004846 0.0e+00 1930.2 1990 55.4
C09p01080 Brassica napus HOM05D004392 ORTHO05D004846 0.0e+00 1922.1 1829 58.1
Aa31LG5G1150 Aethionema arabicum HOM05D004392 ORTHO05D004846 0.0e+00 1914.8 1975 55.3
BolC9t53041H Brassica oleracea HOM05D004392 ORTHO05D004846 0.0e+00 1914.0 1828 58.0
Sp6g01320 Schrenkiella parvula HOM05D004392 ORTHO05D004846 0.0e+00 1911.0 1970 55.5
BcaC04g24098 Brassica carinata HOM05D004392 ORTHO05D004846 0.0e+00 1907.9 1826 57.8
A09p00990 Brassica napus HOM05D004392 ORTHO05D004846 0.0e+00 1898.6 1825 57.9
PSO063G6286 Papaver somniferum HOM05D004392 ORTHO05D004846 0.0e+00 1898.6 2018 53.9
AUR62004560 Chenopodium quinoa HOM05D004392 ORTHO05D004846 0.0e+00 1897.9 1940 55.8
BcaB01g02315 Brassica carinata HOM05D004392 ORTHO05D004846 0.0e+00 1894.8 1925 56.4
BraA09t35770Z Brassica rapa HOM05D004392 ORTHO05D004846 0.0e+00 1889.8 1826 57.7
PSO782G2296 Papaver somniferum HOM05D004392 ORTHO05D004846 0.0e+00 1880.9 2006 53.6
Nn3g18803 Nelumbo nucifera HOM05D004392 ORTHO05D004846 0.0e+00 1879.4 1466 65.6
Dinv34257 Davidia involucrata HOM05D004392 ORTHO05D004846 0.0e+00 1874.8 1699 61.4
EL10Ac1g00187 Beta vulgaris HOM05D004392 ORTHO05D004846 0.0e+00 1872.1 2077 53.2
AUR62022676 Chenopodium quinoa HOM05D004392 ORTHO05D004846 0.0e+00 1857.8 2002 54.0
Ah.05g178970 Amaranthus hybridus HOM05D004392 ORTHO05D004846 0.0e+00 1845.5 1978 54.7
CSS0004566 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 0.0e+00 1840.9 1331 70.2
Cc02_g39950 Coffea canephora HOM05D004392 ORTHO05D004846 0.0e+00 1838.9 1600 60.1
CDE02G2120 Ceratophyllum demersum HOM05D004392 ORTHO05D004846 0.0e+00 1826.2 1862 54.9
Migut.B01921 Erythranthe guttata HOM05D004392 ORTHO05D004846 0.0e+00 1807.3 1870 54.4
Oeu028215.3 Olea europaea HOM05D004392 ORTHO05D004846 0.0e+00 1807.3 1991 52.7
MSTRG.17382 Avicennia marina HOM05D004392 ORTHO05D004846 0.0e+00 1751.9 1955 51.3
Sopen05g026910 Solanum pennellii HOM05D004392 ORTHO05D004846 0.0e+00 1749.9 1883 52.1
CAN.G929.34 Capsicum annuum HOM05D004392 ORTHO05D004846 0.0e+00 1742.6 1878 52.4
Solyc05g044610.3 Solanum lycopersicum HOM05D004392 ORTHO05D004846 0.0e+00 1735.3 1860 52.5
Lsat_1_v5_gn_3_140700 Lactuca sativa HOM05D004392 ORTHO05D004846 0.0e+00 1732.2 1987 52.5
Peaxi162Scf00462g00512 Petunia axillaris HOM05D004392 ORTHO05D004846 0.0e+00 1723.8 1988 51.0
HanXRQChr11g0352941 Helianthus annuus HOM05D004392 ORTHO05D004846 0.0e+00 1708.0 1814 54.5
HanXRQChr11g0352951 Helianthus annuus HOM05D004392 ORTHO05D004846 0.0e+00 1708.0 1814 54.5
SalBow3G1181 Salvia bowleyana HOM05D004392 ORTHO05D004846 0.0e+00 1706.4 1970 50.6
SGA_v2.0_scaffold98G29423 Striga asiatica HOM05D004392 ORTHO05D004846 0.0e+00 1699.9 1979 50.6
Nitab4.5_0000006g0150 Nicotiana tabacum HOM05D004392 ORTHO05D004846 0.0e+00 1699.5 1901 51.5
ECA233G3878 Erigeron canadensis HOM05D004392 ORTHO05D004846 0.0e+00 1692.2 1967 51.5
DCAR_013954 Daucus carota HOM05D004392 ORTHO05D004846 0.0e+00 1668.7 1729 53.9
TAR629G2483 Trochodendron aralioides HOM05D004392 ORTHO05D004846 0.0e+00 1654.0 1241 67.9
ATR0304G014 Amborella trichopoda HOM05D004392 ORTHO05D004846 0.0e+00 1634.8 1478 57.7
Zm00001eb230740 Zea mays HOM05D004392 ORTHO05D004846 0.0e+00 1619.0 1953 49.3
Nitab4.5_0011074g0010 Nicotiana tabacum HOM05D004392 ORTHO05D004846 0.0e+00 1617.1 1951 49.9
QL10p065016 Quercus lobata HOM05D004392 ORTHO05D004846 0.0e+00 1606.7 1236 69.7
SalBow3G3735 Salvia bowleyana HOM05D004392 ORTHO05D004846 0.0e+00 1601.6 1970 48.4
Mapoly0063s0095 Marchantia polymorpha HOM05D004392 ORTHO05D004846 0.0e+00 1142.5 1672 41.6
vmacro00026 Vaccinium macrocarpon HOM05D004392 ORTHO05D004846 0.0e+00 1110.1 1135 58.1
SMO114G0120 Selaginella moellendorffii HOM05D004392 ORTHO05D004846 0.0e+00 1091.6 1884 38.0
CARHR249530 Cardamine hirsuta HOM05D004392 ORTHO05D004846 5.2e-306 1055.4 963 59.2
Pp3c17_2710 Physcomitrium patens HOM05D004392 ORTHO05D004846 1.2e-305 1054.3 1694 39.4
AagrBONN_evm.TU.Sc2ySwM_368.256 Anthoceros agrestis HOM05D004392 ORTHO05D004846 7.2e-300 1035.0 2006 36.1
unitig_736.g22806 Utricularia gibba HOM05D004392 ORTHO05D004846 2.0e-297 1026.9 1914 37.7
CAN.G1674.1 Capsicum annuum HOM05D004392 ORTHO05D004846 1.7e-296 1023.8 1864 38.0
vmacro00027 Vaccinium macrocarpon HOM05D004392 ORTHO05D004846 3.9e-285 986.1 899 59.0
SHI29621 Sapria himalayana HOM05D004392 ORTHO05D004846 6.4e-280 968.8 1161 50.6
Cpa.g.sc193.6 Carica papaya HOM05D004392 ORTHO05D004846 4.9e-272 942.6 1106 54.1
Hma1.2p1_0074F.1_g038700 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 2.2e-264 917.1 994 55.8
HPP92_014634 Vanilla planifolia HOM05D004392 ORTHO05D004846 2.2e-248 864.0 1090 47.5
SEGI_06399 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 2.4e-242 844.0 1041 47.4
Pp3c7_20800 Physcomitrium patens HOM05D004392 ORTHO05D004846 2.1e-222 777.7 1465 34.9
CBR_g34692 Chara braunii HOM05D004392 ORTHO05D004846 1.4e-215 755.0 1928 30.2
Cpa.g.sc193.10 Carica papaya HOM05D004392 ORTHO05D004846 1.3e-195 688.7 542 66.2
Hma1.2p1_0074F.1_g038720 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 2.5e-191 674.5 576 60.9
CAN.G929.33 Capsicum annuum HOM05D004392 ORTHO05D004846 2.5e-183 647.9 1172 37.3
QL10p065024 Quercus lobata HOM05D004392 ORTHO05D004846 7.8e-169 599.7 466 66.3
CAN.G929.32 Capsicum annuum HOM05D004392 ORTHO05D004846 1.2e-150 539.3 833 43.6
SEGI_29076 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 3.4e-148 531.2 663 46.6
Os02g0124700 Oryza sativa ssp. japonica HOM05D004392 ORTHO05D004846 6.4e-139 500.4 562 48.0
SEGI_11710 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 2.8e-134 485.0 562 46.4
HPP92_014635 Vanilla planifolia HOM05D004392 ORTHO05D004846 8.7e-128 463.4 553 48.1
TAR629G0818 Trochodendron aralioides HOM05D004392 ORTHO05D004846 6.2e-126 457.2 732 46.7
HanXRQChr14g0445111 Helianthus annuus HOM05D004392 ORTHO05D004846 4.5e-100 371.3 277 68.6
Cc06_g21290 Coffea canephora HOM05D004392 ORTHO05D004846 7.7e-76 290.8 459 41.2
SHI29617 Sapria himalayana HOM05D004392 ORTHO05D004846 7.2e-74 284.3 379 45.9
Psat3g045760 Pisum sativum HOM05D004392 ORTHO05D004846 1.8e-64 253.1 382 41.4
FAN06G3220 Fragaria x ananassa HOM05D011336 ORTHO05D017014 8.9e-64 250.8 198 78.8
FvH4_7g01070 Fragaria vesca HOM05D011336 ORTHO05D017014 2.9e-59 235.7 156 85.3
Cc00_g18720 Coffea canephora HOM05D004392 ORTHO05D004846 6.1e-57 228.0 252 50.4
BcaB01g02314 Brassica carinata HOM05D004392 ORTHO05D004846 8.9e-56 224.2 705 34.9
FAN07G2918 Fragaria x ananassa HOM05D004392 ORTHO05D004846 7.0e-53 214.5 141 85.8
Mapoly0036s0138 Marchantia polymorpha HOM05D004392 ORTHO05D004846 6.0e-52 211.5 508 34.6
FAN27G1439 Fragaria x ananassa HOM05D011336 ORTHO05D017014 3.3e-50 205.7 321 49.8
Cc00_g00890 Coffea canephora HOM05D004392 ORTHO05D004846 8.3e-46 191.0 343 38.2
Cc05_g02700 Coffea canephora HOM05D004392 ORTHO05D004846 1.7e-43 183.3 174 54.6
Psat3g193680 Pisum sativum HOM05D003463 ORTHO05D030491 1.6e-41 176.8 136 62.5
ATR0304G056 Amborella trichopoda HOM05D004392 ORTHO05D004846 5.2e-40 171.8 438 35.6
SEGI_35470 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 3.4e-39 169.1 221 39.8
FAN07G2805 Fragaria x ananassa HOM05D011336 ORTHO05D022575 1.4e-37 163.7 305 44.9
Psat3g081480 Pisum sativum HOM05D003675 ORTHO05D004318 4.7e-33 148.7 109 69.7
Cc08_g08700 Coffea canephora HOM05D004392 ORTHO05D004846 8.1e-33 147.9 163 49.7
FAN18G0882 Fragaria x ananassa HOM05D011336 ORTHO05D022575 2.4e-32 146.4 304 44.1
FvH4_6g13732 Fragaria vesca HOM05D011336 ORTHO05D022575 5.2e-32 145.2 302 42.1
FAN09G4865 Fragaria x ananassa HOM05D011336 ORTHO05D017014 2.6e-31 142.9 255 47.1
Cfa022536 Carpinus fangiana HOM05D004392 ORTHO05D004846 1.7e-30 140.2 1202 21.2
Cc00_g21570 Coffea canephora HOM05D004392 ORTHO05D004846 2.2e-30 139.8 162 48.8
Psat0s3706g0080 Pisum sativum HOM05D004392 ORTHO05D004846 2.4e-29 136.3 371 31.8
Cc07_g19980 Coffea canephora HOM05D004392 ORTHO05D004846 1.6e-28 133.7 163 45.4
Psat4g159400 Pisum sativum HOM05D003463 ORTHO05D004846 2.7e-28 132.9 96 72.9
Psat0s2140g0040 Pisum sativum HOM05D004392 ORTHO05D004846 4.6e-28 132.1 85 77.6
Lsat_1_v5_gn_7_90420 Lactuca sativa HOM05D004392 ORTHO05D004846 3.3e-26 125.9 224 41.1
Ca_09729_v3 Cicer arietinum L. HOM05D004392 ORTHO05D004846 1.2e-25 124.0 80 70.0
Cre13.g606350 Chlamydomonas reinhardtii HOM05D004392 ORTHO05D004846 1.6e-25 123.6 482 26.3
HanXRQChr14g0436131 Helianthus annuus HOM05D004392 ORTHO05D004846 1.6e-25 123.6 119 55.5
FvH4_7g28240 Fragaria vesca HOM05D011336 ORTHO05D022575 3.6e-25 122.5 134 61.9
Nitab4.5_0002816g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 5.2e-24 118.6 125 52.8
arahy.Tifrunner.gnm1.ann1.IVU47Y Arachis hypogaea HOM05D004392 ORTHO05D004846 2.0e-23 116.7 140 48.6
FvH4_6g21810 Fragaria vesca HOM05D011336 ORTHO05D022575 2.0e-23 116.7 129 62.0
FAN11G2008 Fragaria x ananassa HOM05D011336 ORTHO05D022575 4.4e-23 115.5 289 42.6
FvH4_3g34060 Fragaria vesca HOM05D011336 ORTHO05D017014 1.4e-21 110.5 86 84.9
FAN11G2549 Fragaria x ananassa HOM05D011336 ORTHO05D017014 1.9e-21 110.2 86 70.9
FAN20G2798 Fragaria x ananassa HOM05D011336 ORTHO05D004846 1.6e-20 107.1 359 35.4
RcHm_v2.0_Chr1g0361181 Rosa chinensis HOM05D004392 ORTHO05D004846 2.3e-19 103.2 146 45.9
FAN20G1452 Fragaria x ananassa HOM05D011336 ORTHO05D017014 5.1e-19 102.1 302 35.1
FAN25G1306 Fragaria x ananassa HOM05D011336 ORTHO05D017014 3.6e-17 95.9 136 50.0
Psat3g157320 Pisum sativum HOM05D004392 ORTHO05D004846 4.0e-16 92.4 186 37.1
FvH4_3g16180 Fragaria vesca HOM05D011336 ORTHO05D004846 4.5e-15 89.0 111 58.6
FAN25G1164 Fragaria x ananassa HOM05D011336 ORTHO05D004846 9.9e-15 87.8 100 55.0
Cc00_g33390 Coffea canephora HOM05D004392 ORTHO05D004846 4.9e-14 85.5 103 51.5
FAN08G3289 Fragaria x ananassa HOM05D004392 ORTHO05D017014 6.4e-14 85.1 58 82.8
Psat0s2975g0200 Pisum sativum HOM05D000832 ORTHO05D019229 1.1e-13 84.3 133 39.8
Psat2g063360 Pisum sativum HOM05D004963 ORTHO05D006638 7.1e-13 81.6 55 63.6
Ah.07g200480 Amaranthus hybridus HOM05D004392 ORTHO05D004846 3.0e-11 76.3 70 54.3
Os10g0182300 Oryza sativa ssp. japonica HOM05D004392 ORTHO05D004846 3.0e-11 76.3 73 54.8
Psat0s2154g0040 Pisum sativum HOM05D003471 ORTHO05D004079 9.6e-10 71.2 57 63.2
Psat0s3955g0040 Pisum sativum HOM05D000832 ORTHO05D000900 1.8e-08 67.0 92 43.5
Phvul.002G075100 Phaseolus vulgaris HOM05D004392 ORTHO05D004846 3.1e-08 66.2 155 38.1
FAN07G0466 Fragaria x ananassa HOM05D004392 ORTHO05D017014 1.3e-06 60.8 50 74.0


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