Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.6e-200 702.6 369 100.0
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 5.7e-198 694.1 369 98.6
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 1.6e-195 686.0 369 97.6
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.6e-195 686.0 369 97.6
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 1.9e-185 652.5 377 92.6
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.5e-177 625.5 369 91.3
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 1.9e-161 572.8 378 80.2
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 3.4e-158 562.0 377 79.8
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 6.9e-135 484.6 382 70.4
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 3.4e-134 482.3 368 71.5
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 1.3e-133 480.3 383 71.3
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 8.4e-133 477.6 387 70.5
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 1.4e-132 476.9 324 79.6
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 1.6e-131 473.4 398 68.3
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 1.3e-128 463.8 386 69.4
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 3.7e-128 462.2 390 67.9
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 4.8e-128 461.8 380 68.4
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 4.1e-127 458.8 386 66.6
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 2.0e-126 456.4 381 67.2
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 4.5e-126 455.3 384 65.6
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 4.5e-126 455.3 385 68.1
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.3e-125 453.8 381 66.7
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 8.5e-125 451.1 388 66.0
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 1.9e-124 449.9 378 66.9
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.9e-124 449.9 381 66.4
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.9e-124 449.9 328 73.8
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 2.1e-123 446.4 425 64.5
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 2.7e-123 446.0 377 66.8
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 2.7e-123 446.0 381 68.0
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 3.6e-123 445.7 379 66.8
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 4.6e-123 445.3 377 66.8
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 1.8e-122 443.4 382 65.4
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.5e-121 440.3 412 63.8
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 1.5e-121 440.3 381 66.9
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 1.5e-121 440.3 339 72.3
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 2.0e-121 439.9 379 66.0
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 2.0e-121 439.9 379 66.0
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 3.3e-121 439.1 387 64.6
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 3.3e-121 439.1 371 66.6
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 3.3e-121 439.1 374 67.1
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 5.7e-121 438.3 355 69.6
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 5.7e-121 438.3 376 64.4
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 7.4e-121 438.0 384 66.1
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 9.7e-121 437.6 377 67.1
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 1.7e-120 436.8 373 67.6
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 2.2e-120 436.4 317 74.8
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 2.8e-120 436.0 372 66.4
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 2.8e-120 436.0 405 62.5
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 4.8e-120 435.3 386 64.5
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 4.8e-120 435.3 373 67.6
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 6.3e-120 434.9 379 64.9
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 1.8e-119 433.3 381 64.6
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 3.1e-119 432.6 398 63.6
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 3.1e-119 432.6 374 66.3
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 4.1e-119 432.2 377 66.3
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 6.9e-119 431.4 374 66.3
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 6.9e-119 431.4 374 65.2
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 6.9e-119 431.4 326 72.7
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 2.0e-118 429.9 372 65.1
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.6e-118 429.5 259 84.9
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 2.6e-118 429.5 335 71.3
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 3.4e-118 429.1 378 64.8
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 4.5e-118 428.7 378 65.3
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 1.0e-117 427.6 378 64.0
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 4.2e-116 422.2 385 62.1
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 5.5e-116 421.8 323 71.8
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 5.5e-116 421.8 403 63.3
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 9.4e-116 421.0 303 75.9
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 1.6e-115 420.2 317 71.6
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 1.6e-115 420.2 375 63.2
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 2.7e-115 419.5 260 83.1
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 6.1e-115 418.3 381 62.5
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 1.8e-114 416.8 375 62.1
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 3.0e-114 416.0 376 63.6
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 3.9e-114 415.6 319 71.5
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 2.0e-113 413.3 365 64.4
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 1.3e-112 410.6 370 63.5
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 3.7e-112 409.1 247 85.4
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 1.1e-111 407.5 385 62.3
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 2.4e-111 406.4 322 69.9
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 8.5e-109 397.9 389 62.5
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 3.2e-108 396.0 382 61.8
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 9.4e-108 394.4 351 63.5
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 9.4e-108 394.4 382 58.1
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 5.2e-106 388.7 276 72.8
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.8e-103 380.2 207 98.1
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 1.8e-103 380.2 259 79.2
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 1.6e-102 377.1 327 63.0
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 3.5e-102 375.9 328 64.3
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.8e-101 372.5 429 53.8
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 5.0e-101 372.1 345 59.7
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 3.0e-98 362.8 273 70.3
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 4.0e-98 362.5 331 62.2
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 2.6e-97 359.8 518 47.5
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 7.5e-97 358.2 278 67.3
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 9.7e-97 357.8 395 56.2
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 1.7e-96 357.1 523 46.7
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 5.3e-95 352.1 272 66.9
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 1.6e-94 350.5 326 62.9
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 2.7e-94 349.7 287 64.1
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 4.2e-92 342.4 278 62.9
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 6.1e-91 338.6 324 61.1
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 8.3e-88 328.2 295 66.4
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 8.0e-83 311.6 308 61.0
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 5.7e-81 305.4 392 52.6
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 1.7e-77 293.9 424 50.9
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 1.1e-76 291.2 393 50.4
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 2.1e-75 287.0 186 81.2
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 1.8e-74 283.9 261 57.9
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 1.2e-73 281.2 259 57.9
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 4.1e-71 272.7 295 53.9
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 1.3e-69 267.7 265 59.2
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 5.0e-69 265.8 187 70.6
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.6e-67 260.8 257 54.5
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 5.8e-65 252.3 157 81.5
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 2.9e-64 250.0 268 55.2
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.2e-59 234.6 261 50.6
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 8.1e-59 231.9 128 96.1
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 3.2e-55 219.9 129 83.7
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.3e-53 213.8 136 78.7
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 1.5e-49 201.1 121 86.8
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 7.6e-41 172.2 108 80.6
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 8.7e-37 158.7 250 37.6
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 8.1e-27 125.6 176 43.2
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-26 125.2 187 38.0
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 3.4e-25 120.2 80 81.2
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 7.1e-23 112.5 90 66.7
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.8e-13 81.3 152 43.4
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 1.1e-12 78.6 112 46.4
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 2.2e-11 74.3 41 92.7
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 8.5e-08 62.4 242 23.6
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 1.9e-07 61.2 36 80.6
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 1.6e-06 58.2 51 56.9


User provided reference genes

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