Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.4e-102 376.3 200 100.0
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 8.8e-52 207.6 163 74.8
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 2.6e-51 206.1 148 80.4
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.6e-51 206.1 145 82.8
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.3e-50 203.8 134 86.6
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 8.3e-50 201.1 174 69.5
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 4.1e-49 198.7 164 71.3
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 2.0e-48 196.4 148 73.6
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 2.1e-45 186.4 161 65.8
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 3.0e-44 182.6 128 78.1
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 1.2e-43 180.6 161 63.4
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 3.4e-43 179.1 164 62.8
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 9.8e-43 177.6 169 61.5
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 3.1e-41 172.6 116 81.9
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 3.1e-41 172.6 116 81.0
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 1.2e-40 170.6 157 60.5
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 1.6e-40 170.2 152 60.5
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 1.6e-40 170.2 179 56.4
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 1.6e-40 170.2 179 56.4
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 4.5e-40 168.7 160 58.8
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 5.9e-40 168.3 161 58.4
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.9e-40 168.3 162 59.3
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 7.8e-40 167.9 177 55.9
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 1.0e-39 167.5 115 74.8
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 1.3e-39 167.2 119 71.4
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 1.3e-39 167.2 118 74.6
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 5.0e-39 165.2 163 58.9
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 5.0e-39 165.2 176 56.2
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 5.0e-39 165.2 119 71.4
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 5.0e-39 165.2 154 61.7
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 6.6e-39 164.9 176 56.8
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 6.6e-39 164.9 176 56.8
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 8.6e-39 164.5 172 57.0
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 1.1e-38 164.1 159 57.9
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 1.1e-38 164.1 161 57.1
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 1.1e-38 164.1 112 76.8
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 1.5e-38 163.7 166 58.4
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 3.3e-38 162.5 176 56.2
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 3.3e-38 162.5 160 56.9
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 5.6e-38 161.8 166 54.8
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 5.6e-38 161.8 119 71.4
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 7.3e-38 161.4 161 55.9
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 9.5e-38 161.0 152 61.2
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 9.5e-38 161.0 152 61.2
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 9.5e-38 161.0 154 57.8
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 1.6e-37 160.2 125 68.0
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.6e-37 160.2 154 57.8
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 1.6e-37 160.2 162 56.8
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 2.8e-37 159.5 173 55.5
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 4.7e-37 158.7 156 58.3
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 4.7e-37 158.7 113 69.9
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 4.7e-37 158.7 151 58.9
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 4.7e-37 158.7 149 59.7
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 4.7e-37 158.7 113 69.9
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 6.1e-37 158.3 173 55.5
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 8.0e-37 157.9 155 56.8
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 8.0e-37 157.9 152 61.2
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 1.0e-36 157.5 137 65.0
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 1.4e-36 157.1 147 59.9
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.8e-36 156.8 164 57.3
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 1.8e-36 156.8 149 59.1
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 4.0e-36 155.6 146 61.0
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 8.9e-36 154.5 154 57.1
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 8.9e-36 154.5 121 66.9
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 8.9e-36 154.5 173 54.9
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 1.2e-35 154.1 162 52.5
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 2.0e-35 153.3 149 59.1
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 2.6e-35 152.9 147 57.1
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 5.8e-35 151.8 144 59.0
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 7.5e-35 151.4 118 66.9
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 7.5e-35 151.4 118 66.9
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 9.8e-35 151.0 150 56.7
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 1.3e-34 150.6 150 58.0
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 3.7e-34 149.1 174 51.7
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 6.4e-34 148.3 163 52.8
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 1.1e-33 147.5 157 55.4
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 1.1e-33 147.5 154 56.5
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 1.1e-33 147.5 114 69.3
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 1.4e-33 147.1 117 66.7
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 1.4e-33 147.1 163 54.0
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 3.2e-33 146.0 149 57.0
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 5.4e-33 145.2 160 54.4
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 1.6e-32 143.7 166 51.2
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.0e-32 143.3 140 59.3
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 3.5e-32 142.5 152 54.6
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 6.0e-32 141.7 142 57.7
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 6.0e-32 141.7 161 51.6
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 7.8e-32 141.4 140 57.9
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 1.0e-31 141.0 107 70.1
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 2.3e-31 139.8 158 50.6
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 3.9e-31 139.0 151 53.0
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 8.6e-31 137.9 151 53.6
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 5.6e-30 135.2 118 61.9
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 3.1e-28 129.4 157 47.8
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 2.4e-25 119.8 162 46.3
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 9.2e-25 117.9 99 62.6
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 8.6e-23 111.3 156 46.2
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 7.3e-22 108.2 110 50.9
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 1.6e-21 107.1 140 47.1
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 3.6e-21 105.9 118 55.9
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 4.0e-20 102.4 146 41.8
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 7.1e-17 91.7 115 52.2
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.2e-16 90.9 120 52.5
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.6e-16 90.5 120 52.5
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 2.1e-16 90.1 124 46.8
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 5.2e-12 75.5 103 46.6
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 3.4e-11 72.8 116 40.5
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 5.8e-11 72.0 74 54.1
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.9e-07 59.3 87 44.8
FvH4_1g21970 Fragaria vesca HOM05D010020 ORTHO05D015123 4.3e-06 55.8 91 44.0
FAN19G2556 Fragaria x ananassa HOM05D010020 ORTHO05D015123 4.3e-06 55.8 91 44.0


User provided reference genes

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