Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G2965 Fragaria x ananassa HOM05D000246 ORTHO05D205775 1.9e-95 352.4 172 100.0
RcHm_v2.0_Chr3g0455521 Rosa chinensis HOM05D000246 ORTHO05D007179 3.4e-12 75.9 131 45.8
FAN05G3600 Fragaria x ananassa HOM05D000246 ORTHO05D007179 2.9e-11 72.8 131 44.3
FAN02G0914 Fragaria x ananassa HOM05D000246 ORTHO05D007179 3.8e-11 72.4 105 51.4
Prupe.6G321800 Prunus persica HOM05D000246 ORTHO05D007179 1.1e-10 70.9 129 43.4
FvH4_6g06440 Fragaria vesca HOM05D000246 ORTHO05D007179 9.4e-10 67.8 131 42.0
FAN14G0626 Fragaria x ananassa HOM05D000246 ORTHO05D007179 9.4e-10 67.8 131 42.0
Cpa.g.sc48.83 Carica papaya HOM05D000246 ORTHO05D007179 2.1e-09 66.6 129 41.1
Gohir.A11G267000 Gossypium hirsutum HOM05D000246 ORTHO05D007179 6.1e-09 65.1 129 39.5
Gohir.D11G277100 Gossypium hirsutum HOM05D000246 ORTHO05D007179 8.0e-09 64.7 103 45.6
Gorai.007G299200 Gossypium raimondii HOM05D000246 ORTHO05D007179 8.0e-09 64.7 103 45.6
Cfa006619 Carpinus fangiana HOM05D000246 ORTHO05D007179 1.0e-08 64.3 132 38.6
QL03p011605 Quercus lobata HOM05D000246 ORTHO05D007179 1.4e-08 63.9 103 46.6
QL03p021635 Quercus lobata HOM05D000246 ORTHO05D007179 1.4e-08 63.9 103 46.6
MD04G1201600 Malus domestica HOM05D000246 ORTHO05D007179 1.8e-08 63.5 129 39.5
PGR031G3950 Punica granatum HOM05D000246 ORTHO05D007179 2.3e-08 63.2 135 39.3
Thecc.05G311900 Theobroma cacao HOM05D000246 ORTHO05D007179 2.3e-08 63.2 129 39.5
Haze_04155 Corylus avellana HOM05D000246 ORTHO05D007179 3.0e-08 62.8 106 43.4
Potri.005G026400 Populus trichocarpa HOM05D000246 ORTHO05D007179 3.0e-08 62.8 103 46.6
CiPaw.08G162700 Carya illinoinensis HOM05D000246 ORTHO05D007179 3.9e-08 62.4 129 38.8
Dinv40315 Davidia involucrata HOM05D000246 ORTHO05D007179 3.9e-08 62.4 127 40.2
Manes.08G118800 Manihot esculenta HOM05D000246 ORTHO05D007179 5.2e-08 62.0 129 37.2
CANSAT54G2417 Cannabis sativa HOM05D000246 ORTHO05D007179 1.1e-07 60.8 129 38.0
GSVIVG01031124001 Vitis vinifera HOM05D001472 ORTHO05D002655 1.1e-07 60.8 130 40.0
Ciclev10000234m.g Citrus clementina HOM05D000246 ORTHO05D007179 1.5e-07 60.5 103 43.7
Sabra05G0031700 Salix brachista HOM05D000359 ORTHO05D007179 2.6e-07 59.7 103 44.7
Atru.chr2.19 Acer truncatum HOM05D000246 ORTHO05D007179 3.3e-07 59.3 129 37.2
Aa31LG11G9420 Aethionema arabicum HOM05D000246 ORTHO05D007179 3.3e-07 59.3 106 44.3
Lj5A431G15 Lonicera japonica HOM05D000246 ORTHO05D007179 3.3e-07 59.3 130 40.8
TAR633G0108 Trochodendron aralioides HOM05D000246 ORTHO05D007179 3.3e-07 59.3 129 39.5
CSS0023091 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 4.4e-07 58.9 103 43.7
CSS0043712 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 4.4e-07 58.9 103 43.7
VMungo0720G1583 Vigna mungo HOM05D000246 ORTHO05D007179 4.4e-07 58.9 129 35.7
arahy.Tifrunner.gnm1.ann1.G0LK44 Arachis hypogaea HOM05D000246 ORTHO05D007179 5.7e-07 58.5 103 42.7
vmacro04965 Vaccinium macrocarpon HOM05D000246 ORTHO05D007179 5.7e-07 58.5 103 44.7
arahy.Tifrunner.gnm1.ann1.K95L4M Arachis hypogaea HOM05D000246 ORTHO05D007179 7.4e-07 58.2 103 42.7
Eucgr.L01167 Eucalyptus grandis HOM05D000246 ORTHO05D007179 7.4e-07 58.2 133 36.1
Rhsim07G0187000 Rhododendron simsii HOM05D000246 ORTHO05D007179 7.4e-07 58.2 103 43.7
Zm00001eb354210 Zea mays HOM05D000246 ORTHO05D007179 7.4e-07 58.2 103 43.7
Duzib177G0836 Durio zibethinus HOM05D000246 ORTHO05D007179 9.7e-07 57.8 93 44.1
Actinidia05681 Actinidia chinensis HOM05D000246 ORTHO05D007179 1.3e-06 57.4 103 43.7
Lj5A421T63 Lonicera japonica HOM05D000246 ORTHO05D007179 1.3e-06 57.4 130 40.0
Eucgr.H04508 Eucalyptus grandis HOM05D000246 ORTHO05D007179 1.7e-06 57.0 132 36.4
Psat6g150320 Pisum sativum HOM05D000246 ORTHO05D007179 1.7e-06 57.0 103 41.7
RcHm_v2.0_Chr6g0295551 Rosa chinensis HOM05D000246 ORTHO05D007179 1.7e-06 57.0 55 56.4
Ca_10124_v3 Cicer arietinum L. HOM05D000246 ORTHO05D007179 2.8e-06 56.2 103 39.8
Lsat_1_v5_gn_9_123801 Lactuca sativa HOM05D000246 ORTHO05D007179 2.8e-06 56.2 129 36.4
Os05g0150600 Oryza sativa ssp. japonica HOM05D000246 ORTHO05D007179 2.8e-06 56.2 103 42.7
SHI18109 Sapria himalayana HOM05D000246 ORTHO05D007179 2.8e-06 56.2 103 43.7
Hund21703 Selenicereus undatus HOM05D000246 ORTHO05D007179 2.8e-06 56.2 137 35.0
Phvul.007G196600 Phaseolus vulgaris HOM05D000246 ORTHO05D007179 3.7e-06 55.8 103 39.8
TWI56G0873 Tripterygium wilfordii HOM05D000246 ORTHO05D007179 4.8e-06 55.5 129 36.4


User provided reference genes

Program Settings