Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 9.0e-159 563.9 371 100.0
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 4.8e-136 488.4 390 86.2
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 1.5e-124 450.3 330 93.9
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 1.1e-116 424.1 329 90.6
RcHm_v2.0_Chr2g0151481 Rosa chinensis HOM05D006785 ORTHO05D006259 9.5e-92 341.3 329 79.3
Prupe.3G172600 Prunus persica HOM05D006785 ORTHO05D006259 4.2e-63 246.1 329 65.3
MD17G1139500 Malus domestica HOM05D006785 ORTHO05D006259 6.0e-54 215.7 247 68.4
MD09G1151900 Malus domestica HOM05D006785 ORTHO05D006259 1.6e-51 207.6 247 62.8
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 1.0e-40 171.8 329 41.3
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 2.2e-40 170.6 328 52.4
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 1.2e-38 164.9 325 47.4
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 1.3e-37 161.4 337 36.8
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 3.3e-36 156.8 326 38.0
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 2.1e-35 154.1 328 44.2
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 4.8e-35 152.9 323 44.0
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 1.5e-33 147.9 330 42.4
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 8.5e-32 142.1 319 44.8
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 5.5e-31 139.4 334 45.8
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 2.5e-28 130.6 322 33.9
Haze_13495 Corylus avellana HOM05D006785 ORTHO05D006259 5.7e-28 129.4 325 46.5
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 3.1e-26 123.6 329 34.0
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 4.5e-25 119.8 318 33.6
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 1.0e-24 118.6 333 39.0
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 3.2e-23 113.6 333 31.2
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 2.3e-21 107.5 271 46.5
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 3.0e-21 107.1 332 29.8
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 3.0e-21 107.1 332 29.8
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 3.0e-21 107.1 314 33.8
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 6.7e-21 105.9 311 40.5
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 1.7e-19 101.3 330 30.9
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 2.2e-19 100.9 324 42.9
Aa31LG5G5980 Aethionema arabicum HOM05D006785 ORTHO05D006259 1.1e-18 98.6 313 40.6
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.1e-18 98.6 291 40.2
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 2.4e-18 97.4 291 38.5
Lalb_Chr10g0106721 Lupinus albus HOM05D006785 ORTHO05D006259 2.0e-17 94.4 294 38.4
Ciclev10032336m.g Citrus clementina HOM05D006785 ORTHO05D006259 2.6e-17 94.0 263 49.4
CARHR006150 Cardamine hirsuta HOM05D006785 ORTHO05D006259 1.3e-16 91.7 181 35.4
Lalb_Chr17g0348301 Lupinus albus HOM05D006785 ORTHO05D006259 1.9e-15 87.8 297 39.4
VMungo0647G1995 Vigna mungo HOM05D006785 ORTHO05D006259 2.5e-15 87.4 313 42.8
Sp4g24990 Schrenkiella parvula HOM05D006785 ORTHO05D006259 5.5e-15 86.3 325 30.2
BcaB02g06783 Brassica carinata HOM05D006785 ORTHO05D006259 7.2e-15 85.9 234 52.6
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 9.4e-15 85.5 296 29.7
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 1.6e-14 84.7 301 36.9
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 2.1e-14 84.3 202 30.7
BcaB02g07495 Brassica carinata HOM05D006785 ORTHO05D006259 2.7e-14 84.0 270 43.0
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 3.6e-14 83.6 328 36.6
AL1G16560 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 1.8e-13 81.3 312 34.6
C05p04790 Brassica napus HOM05D006785 ORTHO05D006259 1.8e-13 81.3 181 47.0
BraA10t42785Z Brassica rapa HOM05D006785 ORTHO05D006259 5.2e-13 79.7 202 56.9
Ca_06284_v3 Cicer arietinum L. HOM05D006785 ORTHO05D006259 5.2e-13 79.7 316 37.7
TPR.G12660 Trifolium pratense HOM05D006785 ORTHO05D006259 5.2e-13 79.7 316 35.4
Medtr5g091710 Medicago truncatula HOM05D006785 ORTHO05D006259 1.5e-12 78.2 324 36.4
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 1.5e-12 78.2 104 46.2
BraA05t19307Z Brassica rapa HOM05D006785 ORTHO05D006259 3.3e-12 77.0 235 30.2
C04p03820 Brassica napus HOM05D006785 ORTHO05D006259 5.7e-12 76.3 235 30.6
BolC4t22018H Brassica oleracea HOM05D006785 ORTHO05D006259 1.3e-11 75.1 235 30.2
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 1.7e-11 74.7 290 41.7
Thhalv10009835m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 2.8e-11 73.9 336 26.8
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 4.8e-11 73.2 107 43.9
TAR629G3165 Trochodendron aralioides HOM05D006785 ORTHO05D006259 6.3e-11 72.8 99 41.4
A07p24380 Brassica napus HOM05D006785 ORTHO05D006259 8.2e-11 72.4 235 45.1
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 8.2e-11 72.4 360 24.2
Carub.0005s2562 Capsella rubella HOM05D006785 ORTHO05D006259 1.8e-10 71.2 324 34.6
TAR622G1344 Trochodendron aralioides HOM05D006785 ORTHO05D006259 2.4e-10 70.9 104 43.3
AT3G58840 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 4.1e-10 70.1 231 45.9
Glyma.02G287000 Glycine max HOM05D006785 ORTHO05D006259 5.3e-10 69.7 313 34.2
Aa31LG1G7630 Aethionema arabicum HOM05D006785 ORTHO05D006259 7.0e-10 69.3 127 36.2
Sp1g05290 Schrenkiella parvula HOM05D006785 ORTHO05D006259 7.0e-10 69.3 168 42.9
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 9.1e-10 68.9 126 40.5
arahy.Tifrunner.gnm1.ann1.PX2Y9B Arachis hypogaea HOM05D006785 ORTHO05D006259 1.2e-09 68.6 294 33.0
Lalb_Chr05g0211951 Lupinus albus HOM05D006785 ORTHO05D006259 1.2e-09 68.6 155 36.8
CARHR169250 Cardamine hirsuta HOM05D006785 ORTHO05D006259 1.6e-09 68.2 154 39.0
Psat2g015800 Pisum sativum HOM05D006785 ORTHO05D006259 4.5e-09 66.6 295 35.3
arahy.Tifrunner.gnm1.ann1.W4MS3F Arachis hypogaea HOM05D006785 ORTHO05D006259 7.7e-09 65.9 294 33.0
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 7.7e-09 65.9 167 42.5
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 7.7e-09 65.9 167 42.5
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 1.7e-08 64.7 99 40.4
BraA07t30085Z Brassica rapa HOM05D006785 ORTHO05D023842 2.2e-08 64.3 199 47.2
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.2e-08 64.3 167 41.3
PSO675G6378 Papaver somniferum HOM05D006785 ORTHO05D006259 5.0e-08 63.2 134 33.6
BolC5t29251H Brassica oleracea HOM05D006785 ORTHO05D006259 1.5e-07 61.6 79 44.3
PSO541G2000 Papaver somniferum HOM05D006785 ORTHO05D006259 2.5e-07 60.8 134 32.8
Thhalv10006112m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 3.2e-07 60.5 234 28.2
Sp5g04020 Schrenkiella parvula HOM05D006785 ORTHO05D006259 1.6e-06 58.2 151 36.4
Potri.002G060200 Populus trichocarpa HOM05D006785 ORTHO05D006259 4.7e-06 56.6 108 38.0


User provided reference genes

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