Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0821 Fragaria x ananassa HOM05D002267 ORTHO05D005902 8.7e-240 833.2 405 100.0
FAN26G1557 Fragaria x ananassa HOM05D002267 ORTHO05D005902 1.8e-216 755.7 384 96.9
FAN14G5533 Fragaria x ananassa HOM05D002267 ORTHO05D005902 3.9e-216 754.6 384 96.6
FvH4_6g45710 Fragaria vesca HOM05D002267 ORTHO05D005902 1.5e-215 752.7 384 96.4
FAN23G1730 Fragaria x ananassa HOM05D002267 ORTHO05D005902 1.9e-215 752.3 384 96.9
FAN09G4431 Fragaria x ananassa HOM05D002267 ORTHO05D005902 9.7e-215 750.0 384 95.8
FvH4_5g30870 Fragaria vesca HOM05D002267 ORTHO05D005902 2.2e-211 738.8 384 94.5
RcHm_v2.0_Chr2g0163861 Rosa chinensis HOM05D002267 ORTHO05D005902 6.1e-209 730.7 384 93.8
MD17G1071600 Malus domestica HOM05D002267 ORTHO05D005902 3.6e-193 678.3 385 86.2
Haze_14088 Corylus avellana HOM05D002267 ORTHO05D005902 2.2e-187 659.1 385 83.1
Dinv34871 Davidia involucrata HOM05D002267 ORTHO05D005902 6.5e-187 657.5 383 84.9
CANSAT64G2636 Cannabis sativa HOM05D002267 ORTHO05D005902 3.2e-186 655.2 385 82.9
Ciclev10011558m.g Citrus clementina HOM05D002267 ORTHO05D005902 4.2e-186 654.8 385 82.6
Actinidia36296 Actinidia chinensis HOM05D002267 ORTHO05D005902 7.2e-186 654.1 386 83.4
Cfa007986 Carpinus fangiana HOM05D002267 ORTHO05D005902 9.4e-186 653.7 385 83.1
Dinv33904 Davidia involucrata HOM05D002267 ORTHO05D005902 2.1e-185 652.5 383 83.8
QL02p053833 Quercus lobata HOM05D002267 ORTHO05D005902 1.0e-184 650.2 384 82.0
DCAR_007527 Daucus carota HOM05D002267 ORTHO05D005902 5.2e-184 647.9 386 81.6
Cpa.g.sc652.3 Carica papaya HOM05D002267 ORTHO05D005902 8.8e-184 647.1 386 81.9
Duzib213G0616 Durio zibethinus HOM05D002267 ORTHO05D005902 1.3e-182 643.3 386 82.1
CSS0025473 Camellia sinensis var. sinensis HOM05D002267 ORTHO05D005902 1.7e-182 642.9 387 81.9
CsaV3_5G038940 Cucumis sativus L. HOM05D002267 ORTHO05D005902 2.2e-182 642.5 387 81.9
vmacro05590 Vaccinium macrocarpon HOM05D002267 ORTHO05D005902 8.3e-182 640.6 383 82.5
Nitab4.5_0011661g0010 Nicotiana tabacum HOM05D002267 ORTHO05D005902 1.4e-181 639.8 385 81.0
Solyc06g005370.3 Solanum lycopersicum HOM05D002267 ORTHO05D005902 7.0e-181 637.5 383 80.9
PGSC0003DMG400003469 Solanum tuberosum HOM05D002267 ORTHO05D005902 7.0e-181 637.5 385 80.5
Thecc.07G119800 Theobroma cacao HOM05D002267 ORTHO05D005902 9.1e-181 637.1 386 81.9
Sopen06g001330 Solanum pennellii HOM05D002267 ORTHO05D005902 1.2e-180 636.7 385 80.8
CiPaw.04G004900 Carya illinoinensis HOM05D002267 ORTHO05D005902 1.6e-180 636.3 386 80.8
Gorai.002G053200 Gossypium raimondii HOM05D002267 ORTHO05D005902 2.7e-180 635.6 386 81.1
Lalb_Chr04g0258191 Lupinus albus HOM05D002267 ORTHO05D005902 2.7e-180 635.6 383 80.7
ClCG11G005190 Citrullus lanatus HOM05D002267 ORTHO05D005902 3.5e-180 635.2 387 81.1
COL.COLO4_17522 Corchorus olitorius HOM05D002267 ORTHO05D005902 4.5e-180 634.8 378 82.3
Sed0022523 Sechium edule HOM05D002267 ORTHO05D005902 4.5e-180 634.8 387 80.9
Gohir.A13G150000 Gossypium hirsutum HOM05D002267 ORTHO05D005902 5.9e-180 634.4 386 81.1
Psat3g192200 Pisum sativum HOM05D002267 ORTHO05D005902 5.9e-180 634.4 383 82.0
Gohir.D13G154300 Gossypium hirsutum HOM05D002267 ORTHO05D005902 7.7e-180 634.0 386 80.8
arahy.Tifrunner.gnm1.ann1.D1YG1E Arachis hypogaea HOM05D002267 ORTHO05D005902 1.0e-179 633.6 382 80.4
Gohir.A01G052800 Gossypium hirsutum HOM05D002267 ORTHO05D005902 1.0e-179 633.6 386 80.8
Nitab4.5_0002077g0130 Nicotiana tabacum HOM05D002267 ORTHO05D005902 1.0e-179 633.6 385 80.3
Gohir.D01G042400 Gossypium hirsutum HOM05D002267 ORTHO05D005902 1.3e-179 633.3 386 80.8
Ca_06721_v3 Cicer arietinum L. HOM05D002267 ORTHO05D005902 1.7e-179 632.9 383 81.7
Eucgr.J01450 Eucalyptus grandis HOM05D002267 ORTHO05D005902 2.3e-179 632.5 386 80.8
Gorai.013G174300 Gossypium raimondii HOM05D002267 ORTHO05D005902 2.3e-179 632.5 386 80.8
Glyma.18G279400 Glycine max HOM05D002267 ORTHO05D005902 3.8e-179 631.7 383 80.4
Peaxi162Scf00465g00103 Petunia axillaris HOM05D002267 ORTHO05D005902 3.8e-179 631.7 396 78.5
TAR629G0265 Trochodendron aralioides HOM05D002267 ORTHO05D005902 5.0e-179 631.3 388 79.6
Oeu049334.1 Olea europaea HOM05D002267 ORTHO05D005902 6.5e-179 630.9 387 79.3
arahy.Tifrunner.gnm1.ann1.Y9SFAF Arachis hypogaea HOM05D002267 ORTHO05D005902 8.6e-179 630.6 382 79.8
Medtr7g019260 Medicago truncatula HOM05D002267 ORTHO05D005902 8.6e-179 630.6 382 81.4
TWI34G0765 Tripterygium wilfordii HOM05D002267 ORTHO05D005902 1.1e-178 630.2 386 80.6
Lalb_Chr17g0336641 Lupinus albus HOM05D002267 ORTHO05D005902 3.2e-178 628.6 383 79.9
Cc03_g12570 Coffea canephora HOM05D002267 ORTHO05D005902 4.2e-178 628.2 385 79.7
CAN.G185.18 Capsicum annuum HOM05D002267 ORTHO05D005902 2.1e-177 625.9 385 79.7
Potri.004G106200 Populus trichocarpa HOM05D002267 ORTHO05D005902 2.8e-177 625.5 386 80.1
Atru.chr1.1114 Acer truncatum HOM05D002267 ORTHO05D005902 4.7e-177 624.8 387 79.6
MELO3C022075.2 Cucumis melo HOM05D002267 ORTHO05D005902 4.7e-177 624.8 382 80.9
Potri.017G109500 Populus trichocarpa HOM05D002267 ORTHO05D005902 4.7e-177 624.8 386 79.8
Aqoxy3G03816 Aquilegia oxysepala HOM05D002267 ORTHO05D005902 6.1e-177 624.4 382 80.1
VMungo1383G0144 Vigna mungo HOM05D002267 ORTHO05D005902 6.1e-177 624.4 382 79.6
Lj2A1079T37 Lonicera japonica HOM05D002267 ORTHO05D005902 1.8e-176 622.9 383 80.4
Manes.02G064400 Manihot esculenta HOM05D002267 ORTHO05D005902 3.0e-176 622.1 385 80.3
Lj1g0004668 Lotus japonicus HOM05D002267 ORTHO05D005902 1.5e-175 619.8 383 79.4
Prupe.3G243300 Prunus persica HOM05D002267 ORTHO05D005902 1.5e-175 619.8 347 87.6
HanXRQChr07g0200151 Helianthus annuus HOM05D002267 ORTHO05D005902 2.6e-175 619.0 383 79.1
PGR042G2823 Punica granatum HOM05D002267 ORTHO05D005902 3.4e-175 618.6 383 78.9
Phvul.008G021600 Phaseolus vulgaris HOM05D002267 ORTHO05D005902 9.8e-175 617.1 382 79.1
Hund16106 Selenicereus undatus HOM05D002267 ORTHO05D005902 2.2e-174 615.9 383 78.9
GSVIVG01008609001 Vitis vinifera HOM05D002267 ORTHO05D005902 4.9e-174 614.8 384 79.9
Aa31LG2G3660 Aethionema arabicum HOM05D002267 ORTHO05D005902 8.3e-174 614.0 385 78.4
HanXRQChr17g0559871 Helianthus annuus HOM05D002267 ORTHO05D005902 1.1e-173 613.6 383 78.6
AUR62014559 Chenopodium quinoa HOM05D002267 ORTHO05D005902 2.4e-173 612.5 383 78.3
AT3G30841 Arabidopsis thaliana HOM05D002267 ORTHO05D005902 3.1e-173 612.1 385 77.9
CARHR260400 Cardamine hirsuta HOM05D002267 ORTHO05D005902 3.1e-173 612.1 385 78.2
THA.LOC104805546 Tarenaya hassleriana HOM05D002267 ORTHO05D005902 9.2e-173 610.5 389 78.7
Thhalv10004074m.g Eutrema salsugineum HOM05D002267 ORTHO05D005902 1.2e-172 610.1 385 77.1
MSTRG.15422 Avicennia marina HOM05D002267 ORTHO05D005902 3.5e-172 608.6 385 78.4
Lsat_1_v5_gn_2_86320 Lactuca sativa HOM05D002267 ORTHO05D005902 4.5e-172 608.2 388 77.1
SalBow1G1113 Salvia bowleyana HOM05D002267 ORTHO05D005902 5.9e-172 607.8 383 78.3
A02p37120 Brassica napus HOM05D002267 ORTHO05D005902 7.8e-172 607.4 386 77.2
BraA02t08698Z Brassica rapa HOM05D002267 ORTHO05D005902 7.8e-172 607.4 386 77.2
EL10Ac2g04655 Beta vulgaris HOM05D002267 ORTHO05D005902 1.0e-171 607.1 384 78.4
Sc14g0003340 Simmondsia chinensis HOM05D002267 ORTHO05D005902 1.3e-171 606.7 384 78.1
AL5G20480 Arabidopsis lyrata HOM05D002267 ORTHO05D005902 1.7e-171 606.3 385 77.1
Sabra04G0076200 Salix brachista HOM05D002267 ORTHO05D005902 1.7e-171 606.3 420 73.6
BcaB07g30054 Brassica carinata HOM05D002267 ORTHO05D005902 2.9e-171 605.5 385 76.4
A06p39620 Brassica napus HOM05D002267 ORTHO05D005902 3.8e-171 605.1 385 77.4
AUR62008939 Chenopodium quinoa HOM05D002267 ORTHO05D005902 3.8e-171 605.1 383 77.3
BraA06t26877Z Brassica rapa HOM05D002267 ORTHO05D005902 6.6e-171 604.4 385 77.4
Carub.0006s2794 Capsella rubella HOM05D002267 ORTHO05D005902 6.6e-171 604.4 386 76.7
Sp2g18250 Schrenkiella parvula HOM05D002267 ORTHO05D005902 8.6e-171 604.0 385 77.7
PSO541G0287 Papaver somniferum HOM05D002267 ORTHO05D005902 1.9e-170 602.8 383 77.5
BolC2t11669H Brassica oleracea HOM05D002267 ORTHO05D005902 4.3e-170 601.7 383 76.2
C02p56120 Brassica napus HOM05D002267 ORTHO05D005902 9.5e-170 600.5 383 76.2
PSO675G5323 Papaver somniferum HOM05D002267 ORTHO05D005902 9.5e-170 600.5 383 76.8
AL6G43080 Arabidopsis lyrata HOM05D002267 ORTHO05D005902 1.2e-169 600.1 383 77.0
SGA_v2.0_scaffold62G21549 Striga asiatica HOM05D002267 ORTHO05D005902 2.1e-169 599.4 385 76.4
Hund16105 Selenicereus undatus HOM05D002267 ORTHO05D005902 6.1e-169 597.8 421 72.2
ECA238G0812 Erigeron canadensis HOM05D002267 ORTHO05D005902 1.4e-168 596.7 369 79.4
C07p38670 Brassica napus HOM05D002267 ORTHO05D005902 1.8e-168 596.3 385 76.4
Ah.10g037400 Amaranthus hybridus HOM05D002267 ORTHO05D005902 2.3e-168 595.9 367 80.1
BolC7t44387H Brassica oleracea HOM05D002267 ORTHO05D005902 3.0e-168 595.5 385 76.4
BcaC06g33731 Brassica carinata HOM05D002267 ORTHO05D005902 4.0e-168 595.1 383 76.5
Migut.K00870 Erythranthe guttata HOM05D002267 ORTHO05D005902 1.5e-167 593.2 382 76.7
Os12g0536000 Oryza sativa ssp. japonica HOM05D002267 ORTHO05D005902 2.0e-167 592.8 380 76.1
unitig_748.g7015 Utricularia gibba HOM05D002267 ORTHO05D005902 2.6e-167 592.4 382 75.9
MBI14_g41042_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 4.4e-167 591.7 387 76.2
AT4G09520 Arabidopsis thaliana HOM05D002267 ORTHO05D005902 1.3e-166 590.1 384 76.0
HPP92_013287 Vanilla planifolia HOM05D002267 ORTHO05D005902 1.2e-164 583.6 383 74.4
Zm00001eb137710 Zea mays HOM05D002267 ORTHO05D005902 4.6e-164 581.6 407 70.8
CDE04G2341 Ceratophyllum demersum HOM05D002267 ORTHO05D005902 1.7e-163 579.7 380 74.7
CDE02G3890 Ceratophyllum demersum HOM05D002267 ORTHO05D005902 9.5e-162 573.9 380 73.9
ATR0824G083 Amborella trichopoda HOM05D002267 ORTHO05D005902 4.7e-161 571.6 379 74.7
Psat0s4662g0040 Pisum sativum HOM05D002267 ORTHO05D005902 1.4e-157 560.1 342 81.6
BcaB07g30055 Brassica carinata HOM05D002267 ORTHO05D005902 7.3e-154 547.7 338 78.4
SEGI_04709 Sequoiadendron giganteum HOM05D002267 ORTHO05D005902 1.2e-151 540.4 391 70.6
Sabra17G0091700 Salix brachista HOM05D002267 ORTHO05D008106 1.1e-149 533.9 383 71.0
Mapoly0028s0072 Marchantia polymorpha HOM05D002267 ORTHO05D005902 6.0e-148 528.1 385 70.4
SMO239G0110 Selaginella moellendorffii HOM05D002267 ORTHO05D005902 2.1e-145 519.6 381 70.1
RcHm_v2.0_Chr5g0053071 Rosa chinensis HOM05D002267 ORTHO05D005902 1.1e-141 507.3 267 94.4
Pp3c1_4540 Physcomitrium patens HOM05D002267 ORTHO05D005902 5.1e-139 498.4 384 66.1
TPR.G3251 Trifolium pratense HOM05D002267 ORTHO05D005902 2.1e-137 493.0 279 86.7
MBI14_g39140_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 1.1e-122 444.1 379 63.1
MBI14_g13654_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 3.4e-119 432.6 371 63.3
FAN13G3322 Fragaria x ananassa HOM05D002267 ORTHO05D005902 1.3e-118 430.6 228 95.2
Nn4g23627 Nelumbo nucifera HOM05D002267 ORTHO05D005902 1.3e-118 430.6 383 59.8
FAN02G0256 Fragaria x ananassa HOM05D002267 ORTHO05D005902 6.4e-118 428.3 311 72.0
CBR_g48938 Chara braunii HOM05D002267 ORTHO05D005902 1.9e-117 426.8 405 56.0
vmacro23424 Vaccinium macrocarpon HOM05D002267 ORTHO05D005902 5.1e-115 418.7 376 62.2
BcaC03g17613 Brassica carinata HOM05D002267 ORTHO05D005902 8.2e-105 384.8 251 74.1
HanXRQChr03g0070931 Helianthus annuus HOM05D002267 ORTHO05D005902 4.8e-97 359.0 277 66.1
FAN18G0049 Fragaria x ananassa HOM05D002267 ORTHO05D005902 1.9e-93 347.1 183 95.1
HPP92_013297 Vanilla planifolia HOM05D002267 ORTHO05D005902 2.7e-92 343.2 236 70.8
Cre12.g527400 Chlamydomonas reinhardtii HOM05D002267 ORTHO05D005902 1.8e-91 340.5 427 45.0
SHI33593 Sapria himalayana HOM05D002267 ORTHO05D005902 3.7e-89 332.8 235 69.8
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 6.7e-83 312.0 327 50.5
AagrBONN_evm.TU.Sc2ySwM_362.1960 Anthoceros agrestis HOM05D002267 ORTHO05D005902 4.8e-81 305.8 347 51.3
TPR.G11470 Trifolium pratense HOM05D002267 ORTHO05D005902 1.2e-63 248.1 158 74.7
HanXRQChr03g0070911 Helianthus annuus HOM05D002267 ORTHO05D005902 1.3e-57 228.0 135 82.2
Zm00001eb410550 Zea mays HOM05D002267 ORTHO05D005902 2.4e-56 223.8 136 78.7
MBI14_g42567_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 2.5e-53 213.8 357 40.1
Oeu025125.1 Olea europaea HOM05D002267 ORTHO05D005902 9.5e-53 211.8 150 70.0
AagrBONN_evm.TU.Sc2ySwM_228.1779 Anthoceros agrestis HOM05D002267 ORTHO05D005902 2.2e-49 200.7 133 75.9
MD09G1080600 Malus domestica HOM05D002267 ORTHO05D005902 3.2e-48 196.8 189 60.3
BcaC06g30839 Brassica carinata HOM05D002267 ORTHO05D005902 1.1e-45 188.3 297 42.4
MD09G1080700 Malus domestica HOM05D002267 ORTHO05D005902 1.5e-45 188.0 113 78.8
TAR374G1196 Trochodendron aralioides HOM05D002267 ORTHO05D005902 1.8e-43 181.0 105 82.9
CARHR060050 Cardamine hirsuta HOM05D002267 ORTHO05D005902 4.0e-43 179.9 146 61.6
Duzib177G0042 Durio zibethinus HOM05D002267 ORTHO05D005902 8.3e-41 172.2 136 68.4
HPP92_013296 Vanilla planifolia HOM05D002267 ORTHO05D005902 3.5e-39 166.8 130 66.2
Sed0003994 Sechium edule HOM05D002267 ORTHO05D007330 5.8e-34 149.4 142 58.5
FAN18G1196 Fragaria x ananassa HOM05D002267 ORTHO05D035901 5.4e-32 142.9 75 89.3
MBI14_g13653_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D035901 1.1e-29 135.2 160 48.1
Duzib168G0178 Durio zibethinus HOM05D002267 ORTHO05D029252 3.8e-25 120.2 79 74.7
Glyma.20G047400 Glycine max HOM05D002267 ORTHO05D029252 6.4e-25 119.4 85 71.8
RcHm_v2.0_Chr5g0053081 Rosa chinensis HOM05D002267 ORTHO05D035901 5.3e-19 99.8 51 92.2
GSVIVG01036480001 Vitis vinifera HOM05D002267 ORTHO05D005902 2.0e-18 97.8 53 83.0
Glyma.04G110800 Glycine max HOM05D002267 ORTHO05D029252 5.4e-16 89.7 93 55.9
CAN.G464.25 Capsicum annuum HOM05D002267 ORTHO05D020089 5.1e-14 83.2 61 72.1
Glyma.U031218 Glycine max HOM05D002267 ORTHO05D029252 3.2e-08 63.9 36 83.3


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