Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0350 Fragaria x ananassa HOM05D004349 ORTHO05D005097 3.0e-64 248.4 133 100.0
FAN05G0412 Fragaria x ananassa HOM05D004349 ORTHO05D005097 3.7e-46 188.3 104 100.0
FvH4_6g21430 Fragaria vesca HOM05D004349 ORTHO05D005097 1.8e-45 186.0 104 99.0
FAN05G3233 Fragaria x ananassa HOM05D004349 ORTHO05D005097 1.8e-45 186.0 104 99.0
FAN09G4703 Fragaria x ananassa HOM05D004349 ORTHO05D005097 5.3e-45 184.5 104 98.1
FAN14G0676 Fragaria x ananassa HOM05D004349 ORTHO05D005097 9.1e-45 183.7 104 98.1
FAN14G3215 Fragaria x ananassa HOM05D004349 ORTHO05D005097 9.1e-45 183.7 104 98.1
FAN02G1450 Fragaria x ananassa HOM05D004349 ORTHO05D005097 2.6e-44 182.2 104 97.1
RcHm_v2.0_Chr4g0406251 Rosa chinensis HOM05D004349 ORTHO05D005097 5.9e-44 181.0 104 96.2
MD12G1050700 Malus domestica HOM05D004349 ORTHO05D005097 3.6e-41 171.8 104 90.4
MD14G1049500 Malus domestica HOM05D004349 ORTHO05D005097 1.4e-40 169.9 104 89.4
Prupe.7G086000 Prunus persica HOM05D004349 ORTHO05D005097 3.0e-40 168.7 104 88.5
Prupe.1G547000 Prunus persica HOM05D004349 ORTHO05D005097 5.7e-39 164.5 104 85.6
Prupe.1G300700 Prunus persica HOM05D004349 ORTHO05D005097 7.4e-39 164.1 104 84.6
Prupe.7G024200 Prunus persica HOM05D004349 ORTHO05D005097 7.4e-39 164.1 104 84.6
Atru.chr8.1222 Acer truncatum HOM05D004349 ORTHO05D005097 9.7e-39 163.7 96 91.7
TWI74G1533 Tripterygium wilfordii HOM05D004349 ORTHO05D005097 1.3e-38 163.3 94 92.6
Prupe.3G021700 Prunus persica HOM05D004349 ORTHO05D005097 1.7e-38 162.9 104 83.7
QL11p005722 Quercus lobata HOM05D004349 ORTHO05D005097 1.7e-38 162.9 96 90.6
CiPaw.09G026100 Carya illinoinensis HOM05D004349 ORTHO05D005097 2.2e-38 162.5 94 92.6
ClCG10G017820 Citrullus lanatus HOM05D004349 ORTHO05D005097 2.2e-38 162.5 94 93.6
MELO3C009592.2 Cucumis melo HOM05D004349 ORTHO05D005097 2.2e-38 162.5 94 93.6
CsaV3_7G005510 Cucumis sativus L. HOM05D004349 ORTHO05D005097 2.2e-38 162.5 94 93.6
Prupe.8G249100 Prunus persica HOM05D004349 ORTHO05D005097 2.2e-38 162.5 104 83.7
Sed0001935 Sechium edule HOM05D004349 ORTHO05D005097 2.2e-38 162.5 94 93.6
Cfa020113 Carpinus fangiana HOM05D004349 ORTHO05D005097 2.8e-38 162.2 94 92.6
Haze_20078 Corylus avellana HOM05D004349 ORTHO05D005097 2.8e-38 162.2 94 92.6
COL.COLO4_29437 Corchorus olitorius HOM05D004349 ORTHO05D005097 3.7e-38 161.8 94 92.6
ECA240G0294 Erigeron canadensis HOM05D004349 ORTHO05D005097 3.7e-38 161.8 94 92.6
HanXRQChr01g0024771 Helianthus annuus HOM05D004349 ORTHO05D005097 4.8e-38 161.4 94 91.5
Nitab4.5_0001874g0080 Nicotiana tabacum HOM05D004349 ORTHO05D005097 4.8e-38 161.4 94 91.5
Peaxi162Scf00463g00127 Petunia axillaris HOM05D004349 ORTHO05D005097 4.8e-38 161.4 94 91.5
Prupe.1G181600 Prunus persica HOM05D004349 ORTHO05D005097 4.8e-38 161.4 104 84.6
Solyc04g081430.3 Solanum lycopersicum HOM05D004349 ORTHO05D005097 4.8e-38 161.4 94 91.5
Sopen04g035040 Solanum pennellii HOM05D004349 ORTHO05D005097 4.8e-38 161.4 94 91.5
PGSC0003DMG401009863 Solanum tuberosum HOM05D004349 ORTHO05D005097 4.8e-38 161.4 94 91.5
Sed0019694 Sechium edule HOM05D004349 ORTHO05D005097 6.3e-38 161.0 94 93.6
Duzib093G0127 Durio zibethinus HOM05D004349 ORTHO05D005097 8.2e-38 160.6 94 91.5
Nn2g15821 Nelumbo nucifera HOM05D004349 ORTHO05D005097 8.2e-38 160.6 94 91.5
TAR623G1044 Trochodendron aralioides HOM05D004349 ORTHO05D005097 8.2e-38 160.6 94 91.5
Aqoxy1G00443 Aquilegia oxysepala HOM05D004349 ORTHO05D005097 1.1e-37 160.2 94 90.4
Dinv25025 Davidia involucrata HOM05D004349 ORTHO05D005097 1.1e-37 160.2 94 90.4
TWI77G0543 Tripterygium wilfordii HOM05D004349 ORTHO05D005097 1.1e-37 160.2 94 92.6
Actinidia01590 Actinidia chinensis HOM05D004349 ORTHO05D005097 1.4e-37 159.8 94 90.4
EL10Ac2g02766 Beta vulgaris HOM05D004349 ORTHO05D005097 1.4e-37 159.8 94 90.4
Nitab4.5_0000571g0040 Nicotiana tabacum HOM05D004349 ORTHO05D005097 1.4e-37 159.8 103 85.4
GSVIVG01033427001 Vitis vinifera HOM05D004349 ORTHO05D005097 1.4e-37 159.8 94 90.4
Ciclev10012936m.g Citrus clementina HOM05D004349 ORTHO05D005097 1.8e-37 159.5 94 91.5
Manes.08G039900 Manihot esculenta HOM05D004349 ORTHO05D005097 1.8e-37 159.5 94 89.4
Hma1.2p1_0516F.1_g170550 Hydrangea macrophylla HOM05D004349 ORTHO05D005097 2.4e-37 159.1 94 89.4
Cc09_g02100 Coffea canephora HOM05D004349 ORTHO05D005097 3.1e-37 158.7 94 89.4
HPP92_013495 Vanilla planifolia HOM05D004349 ORTHO05D005097 3.1e-37 158.7 94 90.4
Potri.016G062800 Populus trichocarpa HOM05D004349 ORTHO05D005097 4.1e-37 158.3 93 91.4
Prupe.1G035300 Prunus persica HOM05D004349 ORTHO05D005097 4.1e-37 158.3 104 83.7
QL05p072253 Quercus lobata HOM05D004349 ORTHO05D005097 4.1e-37 158.3 96 87.5
Prupe.6G266300 Prunus persica HOM05D004349 ORTHO05D005097 5.3e-37 157.9 104 83.7
MSTRG.10496 Avicennia marina HOM05D004349 ORTHO05D005097 7.0e-37 157.5 94 89.4
Migut.L01584 Erythranthe guttata HOM05D004349 ORTHO05D005097 7.0e-37 157.5 93 89.2
Gohir.D11G331900 Gossypium hirsutum HOM05D004349 ORTHO05D005097 7.0e-37 157.5 94 89.4
Gorai.007G362800 Gossypium raimondii HOM05D004349 ORTHO05D005097 7.0e-37 157.5 94 89.4
Cpa.g.sc85.16 Carica papaya HOM05D004349 ORTHO05D005097 9.1e-37 157.1 94 89.4
CSS0044984 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 1.2e-36 156.8 94 87.2
PSO528G0119 Papaver somniferum HOM05D004349 ORTHO05D005097 1.2e-36 156.8 94 88.3
DCAR_018883 Daucus carota HOM05D004349 ORTHO05D005097 2.0e-36 156.0 94 87.2
HanXRQChr03g0090511 Helianthus annuus HOM05D004349 ORTHO05D005097 2.0e-36 156.0 129 69.8
PSO170G4263 Papaver somniferum HOM05D004349 ORTHO05D005097 2.0e-36 156.0 94 88.3
Rhsim10G0130900 Rhododendron simsii HOM05D004349 ORTHO05D005097 2.0e-36 156.0 94 88.3
Ah.13g075520 Amaranthus hybridus HOM05D004349 ORTHO05D005097 2.6e-36 155.6 94 88.3
CANSAT54G2032 Cannabis sativa HOM05D004349 ORTHO05D005097 2.6e-36 155.6 94 89.4
LjContig00564g0000037 Lotus japonicus HOM05D004349 ORTHO05D005097 2.6e-36 155.6 94 88.3
HPP92_026048 Vanilla planifolia HOM05D004349 ORTHO05D005097 2.6e-36 155.6 94 89.4
arahy.Tifrunner.gnm1.ann1.2RRL5Q Arachis hypogaea HOM05D004349 ORTHO05D005097 4.5e-36 154.8 95 86.3
arahy.Tifrunner.gnm1.ann1.9IE653 Arachis hypogaea HOM05D004349 ORTHO05D005097 4.5e-36 154.8 95 86.3
arahy.Tifrunner.gnm1.ann1.FMT65J Arachis hypogaea HOM05D004349 ORTHO05D005097 4.5e-36 154.8 95 86.3
MBI18_g03872_MAGBIO Magnolia biondii HOM05D004349 ORTHO05D005097 4.5e-36 154.8 94 87.2
Rhsim04G0092200 Rhododendron simsii HOM05D004349 ORTHO05D005097 4.5e-36 154.8 94 87.2
Rhsim04G0092400 Rhododendron simsii HOM05D004349 ORTHO05D005097 4.5e-36 154.8 94 87.2
SGA_v2.0_scaffold21G09532 Striga asiatica HOM05D004349 ORTHO05D005097 4.5e-36 154.8 94 87.2
Glyma.07G029300 Glycine max HOM05D004349 ORTHO05D005097 5.9e-36 154.5 94 87.2
Psat5g280400 Pisum sativum HOM05D004349 ORTHO05D005097 5.9e-36 154.5 94 87.2
CDE02G3593 Ceratophyllum demersum HOM05D000001 ORTHO05D000424 7.7e-36 154.1 94 87.2
Os04g0661800 Oryza sativa ssp. japonica HOM05D004349 ORTHO05D005097 7.7e-36 154.1 100 84.0
THA.LOC104821832 Tarenaya hassleriana HOM05D004349 ORTHO05D005097 1.0e-35 153.7 94 87.2
TPR.G11586 Trifolium pratense HOM05D004349 ORTHO05D005097 1.0e-35 153.7 93 88.2
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 1.0e-35 153.7 94 86.2
Glyma.08G213500 Glycine max HOM05D004349 ORTHO05D005097 1.3e-35 153.3 94 86.2
Phvul.010G156700 Phaseolus vulgaris HOM05D004349 ORTHO05D005097 2.2e-35 152.5 94 86.2
Medtr6g471120 Medicago truncatula HOM05D004349 ORTHO05D005097 2.9e-35 152.1 94 86.2
ECA248G3305 Erigeron canadensis HOM05D004349 ORTHO05D005097 8.5e-35 150.6 94 86.2
Medtr2g094720 Medicago truncatula HOM05D004349 ORTHO05D005097 8.5e-35 150.6 94 85.1
AL6G12510 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 1.1e-34 150.2 94 84.0
CARHR210130 Cardamine hirsuta HOM05D004349 ORTHO05D005097 1.1e-34 150.2 94 84.0
Thhalv10021663m.g Eutrema salsugineum HOM05D004349 ORTHO05D005097 1.1e-34 150.2 94 84.0
Sp6g39510 Schrenkiella parvula HOM05D004349 ORTHO05D005097 1.1e-34 150.2 94 84.0
AT5G03500 Arabidopsis thaliana HOM05D004349 ORTHO05D005097 1.9e-34 149.4 94 83.0
AL3G38450 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 2.5e-34 149.1 94 83.0
AL6G12940 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 2.5e-34 149.1 94 83.0
Carub.0006s2456 Capsella rubella HOM05D004349 ORTHO05D005097 2.5e-34 149.1 94 83.0
Ca_01401_v3 Cicer arietinum L. HOM05D004349 ORTHO05D005097 2.5e-34 149.1 94 83.0
Zm00001eb432780 Zea mays HOM05D004349 ORTHO05D005097 2.5e-34 149.1 98 81.6
AT5G03220 Arabidopsis thaliana HOM05D004349 ORTHO05D005097 4.2e-34 148.3 94 83.0
Carub.0006s0201 Capsella rubella HOM05D004349 ORTHO05D005097 4.2e-34 148.3 94 81.9
TPR.G23269 Trifolium pratense HOM05D004349 ORTHO05D005097 4.2e-34 148.3 94 81.9
Thhalv10014853m.g Eutrema salsugineum HOM05D004349 ORTHO05D005097 7.2e-34 147.5 94 83.0
Lalb_Chr23g0277751 Lupinus albus HOM05D004349 ORTHO05D005097 7.2e-34 147.5 94 81.9
CARHR040500 Cardamine hirsuta HOM05D004349 ORTHO05D005097 1.2e-33 146.7 94 80.9
BcaC03g13019 Brassica carinata HOM05D004349 ORTHO05D005097 1.6e-33 146.4 94 81.9
BolC2t06089H Brassica oleracea HOM05D004349 ORTHO05D005097 1.6e-33 146.4 94 81.9
Zm00001eb067450 Zea mays HOM05D004349 ORTHO05D005097 1.6e-33 146.4 94 83.0
Aa31LG1G21860 Aethionema arabicum HOM05D004349 ORTHO05D005097 2.7e-33 145.6 94 81.9
BcaNung06685 Brassica carinata HOM05D004349 ORTHO05D005097 4.7e-33 144.8 94 79.8
BolC9t60086H Brassica oleracea HOM05D004349 ORTHO05D005097 4.7e-33 144.8 94 79.8
Dinv24030 Davidia involucrata HOM05D004349 ORTHO05D005097 8.0e-33 144.1 94 83.0
SHI30021 Sapria himalayana HOM05D004349 ORTHO05D005097 2.3e-32 142.5 94 79.8
vmacro17893 Vaccinium macrocarpon HOM05D004349 ORTHO05D005097 2.3e-32 142.5 111 73.0
Lalb_Chr19g0125421 Lupinus albus HOM05D004349 ORTHO05D005097 4.0e-32 141.7 96 76.0
Sabra06G0151800 Salix brachista HOM05D004349 ORTHO05D005097 4.0e-32 141.7 78 94.9
Thecc.05G180500 Theobroma cacao HOM05D004349 ORTHO05D005097 5.2e-32 141.4 77 96.1
Lj2C360G6 Lonicera japonica HOM05D004349 ORTHO05D005097 6.8e-32 141.0 77 94.8
ATR0564G039 Amborella trichopoda HOM05D004349 ORTHO05D005097 8.8e-32 140.6 117 70.9
Eucgr.A02508 Eucalyptus grandis HOM05D004349 ORTHO05D005097 1.2e-31 140.2 77 94.8
Hund26707 Selenicereus undatus HOM05D004349 ORTHO05D005097 1.2e-31 140.2 132 64.4
SEGI_10501 Sequoiadendron giganteum HOM05D004349 ORTHO05D005097 1.5e-31 139.8 94 76.6
TAR623G0936 Trochodendron aralioides HOM05D004349 ORTHO05D005097 2.6e-31 139.0 77 93.5
AUR62015286 Chenopodium quinoa HOM05D004349 ORTHO05D005097 1.3e-30 136.7 77 92.2
VMungo0331G0313 Vigna mungo HOM05D004349 ORTHO05D005097 2.8e-30 135.6 76 92.1
Sabra16G0064800 Salix brachista HOM05D004349 ORTHO05D005097 3.7e-30 135.2 77 90.9
ATR0580G353 Amborella trichopoda HOM05D004349 ORTHO05D005097 4.8e-30 134.8 76 92.1
BraA10t45308Z Brassica rapa HOM05D004349 ORTHO05D005097 1.8e-29 132.9 77 87.0
RcHm_v2.0_Chr3g0478001 Rosa chinensis HOM05D004349 ORTHO05D005097 1.8e-29 132.9 79 89.9
Mapoly0052s0099 Marchantia polymorpha HOM05D004349 ORTHO05D005097 2.4e-29 132.5 94 72.3
A10p32710 Brassica napus HOM05D004349 ORTHO05D005097 4.1e-29 131.7 77 85.7
Lsat_1_v5_gn_1_58740 Lactuca sativa HOM05D004349 ORTHO05D005097 5.3e-29 131.3 73 93.2
BraA02t04750Z Brassica rapa HOM05D004349 ORTHO05D005097 9.1e-29 130.6 90 76.7
SMO340G0091 Selaginella moellendorffii HOM05D004349 ORTHO05D005097 1.2e-28 130.2 95 69.5
C02p00910 Brassica napus HOM05D004349 ORTHO05D005097 1.6e-28 129.8 77 87.0
Gohir.A11G314900 Gossypium hirsutum HOM05D004349 ORTHO05D005097 2.0e-28 129.4 71 94.4
SMO358G0681 Selaginella moellendorffii HOM05D004349 ORTHO05D005097 2.0e-28 129.4 94 70.2
CBR_g46752 Chara braunii HOM05D004349 ORTHO05D005097 4.5e-28 128.3 87 72.4
AagrBONN_evm.TU.Sc2ySwM_117.2767 Anthoceros agrestis HOM05D004349 ORTHO05D005097 1.0e-27 127.1 103 67.0
C09p73550 Brassica napus HOM05D004349 ORTHO05D005097 1.0e-27 127.1 84 77.4
Rhsim04G0093300 Rhododendron simsii HOM05D004349 ORTHO05D005097 1.9e-26 122.9 73 87.7
AagrBONN_evm.TU.Sc2ySwM_362.1623 Anthoceros agrestis HOM05D004349 ORTHO05D005097 7.2e-26 120.9 89 70.8
Prupe.2G085900 Prunus persica HOM05D004349 ORTHO05D005097 1.2e-25 120.2 63 98.4
CSS0033717 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 1.8e-24 116.3 83 73.5
arahy.Tifrunner.gnm1.ann1.UX8DIM Arachis hypogaea HOM05D004349 ORTHO05D005097 3.4e-23 112.1 95 70.5
CARHR099790 Cardamine hirsuta HOM05D004349 ORTHO05D005097 3.4e-23 112.1 76 75.0
CARHR251030 Cardamine hirsuta HOM05D004349 ORTHO05D005097 4.5e-20 101.7 69 73.9
RcHm_v2.0_Chr3g0478061 Rosa chinensis HOM05D004349 ORTHO05D005097 7.7e-20 100.9 54 92.6
CAN.G311.28 Capsicum annuum HOM05D004349 ORTHO05D005097 1.0e-19 100.5 52 96.2
Pp3c5_20850 Physcomitrium patens HOM05D004349 ORTHO05D005097 1.7e-19 99.8 76 68.4
PGR004G2245 Punica granatum HOM05D004349 ORTHO05D005097 1.7e-19 99.8 54 90.7
Sc13g0002530 Simmondsia chinensis HOM05D004349 ORTHO05D005097 5.0e-19 98.2 52 94.2
CARHR218030 Cardamine hirsuta HOM05D004349 ORTHO05D005097 8.6e-19 97.4 64 75.0
RcHm_v2.0_Chr3g0478341 Rosa chinensis HOM05D004349 ORTHO05D005097 1.5e-18 96.7 99 58.6
CARHR258920 Cardamine hirsuta HOM05D004349 ORTHO05D005097 1.6e-17 93.2 65 73.8
RcHm_v2.0_Chr3g0478211 Rosa chinensis HOM05D004349 ORTHO05D005097 4.0e-16 88.6 49 93.9
PRCOL_00002553 Prasinoderma coloniale HOM05D004349 ORTHO05D005097 2.0e-12 76.3 91 46.2
MCO10G402 Micromonas commoda HOM05D004349 ORTHO05D005097 3.5e-12 75.5 98 46.9
RcHm_v2.0_Chr3g0478621 Rosa chinensis HOM05D004349 ORTHO05D005097 2.3e-11 72.8 75 62.7
Cre01.g062902 Chlamydomonas reinhardtii HOM05D004349 ORTHO05D005097 1.5e-07 60.1 86 41.9


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