Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 2.7e-75 285.4 165 100.0
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.5e-57 226.5 123 95.1
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 9.8e-57 223.8 123 95.9
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 6.6e-53 211.1 121 90.9
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 5.1e-45 184.9 123 78.9
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 1.5e-44 183.3 123 78.0
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 3.3e-44 182.2 96 96.9
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 2.3e-42 176.0 123 74.0
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 2.3e-42 176.0 123 74.8
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 5.8e-41 171.4 121 72.7
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 3.8e-40 168.7 117 74.4
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 3.8e-40 168.7 123 70.7
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 1.1e-39 167.2 121 71.1
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 1.1e-39 167.2 121 71.9
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 1.4e-39 166.8 121 70.2
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.4e-39 166.8 119 71.4
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.9e-39 166.4 121 71.9
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 2.4e-39 166.0 121 70.2
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 5.4e-39 164.9 121 71.1
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 5.4e-39 164.9 121 71.1
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 1.2e-38 163.7 121 68.6
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 2.1e-38 162.9 118 71.2
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 2.1e-38 162.9 118 71.2
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 2.7e-38 162.5 123 67.5
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 4.6e-38 161.8 122 70.5
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 7.8e-38 161.0 121 73.6
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.0e-37 160.6 121 69.4
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 1.3e-37 160.2 121 67.8
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 1.3e-37 160.2 123 69.9
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 2.3e-37 159.5 121 68.6
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 5.1e-37 158.3 121 71.9
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 5.1e-37 158.3 123 65.9
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 8.6e-37 157.5 120 70.0
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 1.9e-36 156.4 123 64.2
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 4.3e-36 155.2 121 65.3
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 5.6e-36 154.8 114 71.1
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 7.3e-36 154.5 130 68.5
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 7.3e-36 154.5 123 65.0
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 9.6e-36 154.1 128 63.3
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 9.6e-36 154.1 128 62.5
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 1.6e-35 153.3 123 64.2
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 2.1e-35 152.9 117 68.4
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 4.7e-35 151.8 78 98.7
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 6.2e-35 151.4 123 64.2
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 8.1e-35 151.0 123 68.3
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 1.4e-34 150.2 119 65.5
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 1.4e-34 150.2 123 63.4
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 1.8e-34 149.8 116 68.1
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 2.4e-34 149.4 123 67.5
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 2.4e-34 149.4 96 77.1
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 3.1e-34 149.1 123 67.5
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 3.1e-34 149.1 121 66.9
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 4.0e-34 148.7 113 69.0
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 4.0e-34 148.7 113 69.0
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 5.2e-34 148.3 117 65.8
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 8.9e-34 147.5 113 68.1
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 8.9e-34 147.5 149 54.4
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 1.5e-33 146.7 119 63.9
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 2.0e-33 146.4 113 68.1
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 2.0e-33 146.4 113 68.1
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 2.0e-33 146.4 113 68.1
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 2.0e-33 146.4 113 68.1
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 2.0e-33 146.4 119 63.0
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 2.6e-33 146.0 118 64.4
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 2.6e-33 146.0 119 63.0
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 3.4e-33 145.6 121 62.8
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 5.8e-33 144.8 113 67.3
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 1.7e-32 143.3 113 65.5
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 2.9e-32 142.5 113 68.1
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 2.9e-32 142.5 109 67.0
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 4.9e-32 141.7 111 64.9
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 6.4e-32 141.4 108 67.6
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 6.4e-32 141.4 108 66.7
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 1.9e-31 139.8 108 65.7
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 2.4e-31 139.4 108 63.9
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 4.2e-31 138.7 112 63.4
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 7.1e-31 137.9 113 63.7
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 9.3e-31 137.5 114 64.0
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 1.6e-30 136.7 112 62.5
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 1.6e-30 136.7 121 61.2
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 2.7e-30 136.0 121 61.2
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 2.7e-30 136.0 108 65.7
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 1.3e-29 133.7 104 65.4
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 1.7e-29 133.3 122 57.4
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 3.0e-29 132.5 122 57.4
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 5.1e-29 131.7 121 60.3
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 5.1e-29 131.7 108 62.0
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 8.7e-29 131.0 119 57.1
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 8.7e-29 131.0 122 56.6
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 8.7e-29 131.0 152 50.0
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 3.3e-28 129.0 143 52.4
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 4.3e-28 128.6 108 62.0
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 5.6e-28 128.3 113 61.1
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 3.6e-27 125.6 113 59.3
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 5.8e-25 118.2 124 53.2
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.1e-23 114.0 94 60.6
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.1e-23 114.0 77 72.7
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.1e-23 114.0 77 72.7
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.4e-23 112.8 85 65.9
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.4e-23 112.8 85 65.9
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 4.2e-23 112.1 108 54.6
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 4.2e-23 112.1 84 66.7
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 6.0e-22 108.2 113 52.2
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 2.3e-21 106.3 88 63.6
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.1e-20 104.0 70 77.1
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 1.1e-20 104.0 117 53.8
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 7.4e-20 101.3 73 69.9
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 1.1e-15 87.4 102 44.1
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 1.9e-15 86.7 77 61.0
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 1.6e-14 83.6 67 62.7
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 7.9e-14 81.3 101 45.5
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 4.0e-10 68.9 122 36.1
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 2.2e-08 63.2 49 69.4
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 6.5e-08 61.6 38 76.3


User provided reference genes

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