Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.4e-180 636.3 370 100.0
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 4.8e-168 594.7 370 94.9
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 9.6e-145 517.3 370 87.6
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.7e-144 515.4 370 87.3
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.6e-123 446.8 366 77.9
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 1.5e-100 370.5 246 85.8
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 3.3e-84 316.2 324 59.3
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 1.0e-82 311.2 316 58.5
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 1.0e-77 294.7 304 58.6
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 1.3e-77 294.3 303 58.4
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 3.9e-77 292.7 308 59.4
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 9.5e-76 288.1 304 57.6
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 6.2e-75 285.4 293 57.0
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 4.0e-74 282.7 308 55.2
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 1.5e-73 280.8 315 54.9
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 2.6e-73 280.0 316 55.4
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 2.9e-72 276.6 315 55.2
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 2.4e-71 273.5 309 55.3
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 2.7e-70 270.0 305 53.1
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 6.0e-70 268.9 306 54.9
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 7.8e-70 268.5 309 52.1
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 7.8e-70 268.5 317 53.0
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 1.1e-68 264.6 319 52.7
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 1.9e-68 263.8 312 52.9
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 4.3e-68 262.7 307 51.1
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 9.5e-68 261.5 322 54.3
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.4e-66 257.7 321 50.5
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 4.0e-66 256.1 310 49.7
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 4.0e-66 256.1 307 54.7
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 1.2e-65 254.6 302 52.0
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 1.5e-65 254.2 340 48.2
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 2.0e-65 253.8 317 51.4
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 3.4e-65 253.1 318 50.9
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 9.9e-65 251.5 307 52.1
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 9.9e-65 251.5 303 52.1
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 9.9e-65 251.5 307 52.4
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 1.7e-64 250.8 320 50.6
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.7e-64 250.8 328 48.8
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 2.9e-64 250.0 323 50.5
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 4.9e-64 249.2 302 53.0
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 8.4e-64 248.4 309 50.5
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 8.4e-64 248.4 316 50.3
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 1.9e-63 247.3 316 50.6
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 2.4e-63 246.9 308 50.6
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 5.4e-63 245.7 317 50.8
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 7.1e-63 245.4 307 51.8
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 9.2e-63 245.0 298 51.7
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 1.6e-62 244.2 304 51.6
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 2.1e-62 243.8 318 49.7
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 4.6e-62 242.7 317 49.5
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 6.0e-62 242.3 299 52.5
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 6.0e-62 242.3 307 53.1
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 6.0e-62 242.3 305 51.8
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 3.0e-61 240.0 311 51.1
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 3.9e-61 239.6 294 51.0
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 1.1e-60 238.0 286 53.8
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 1.1e-60 238.0 306 49.7
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 1.5e-60 237.7 316 49.7
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 1.9e-60 237.3 293 49.5
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 2.5e-60 236.9 319 47.3
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 5.6e-60 235.7 317 48.9
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 2.1e-59 233.8 310 49.0
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 2.1e-59 233.8 312 47.1
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 2.1e-59 233.8 316 47.2
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 3.6e-59 233.0 312 46.8
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 3.6e-59 233.0 282 53.5
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 6.2e-59 232.3 297 50.2
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 1.1e-58 231.5 294 48.6
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 1.1e-58 231.5 280 50.7
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 2.4e-58 230.3 282 53.2
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 2.4e-58 230.3 315 48.3
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 2.4e-58 230.3 329 48.0
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 3.1e-58 229.9 295 48.8
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 4.0e-58 229.6 289 51.9
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 4.0e-58 229.6 314 47.1
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 2.0e-57 227.3 305 49.5
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.6e-57 226.9 307 49.2
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 2.2e-56 223.8 303 48.2
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 8.4e-56 221.9 294 49.7
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 8.4e-56 221.9 280 49.3
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 1.4e-55 221.1 278 51.1
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 4.2e-55 219.5 514 34.8
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 5.4e-55 219.2 316 44.3
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 1.2e-54 218.0 240 56.7
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 2.1e-54 217.2 321 43.6
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 4.3e-52 209.5 307 45.6
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 5.6e-52 209.1 233 55.8
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 1.8e-50 204.1 304 47.0
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 6.9e-50 202.2 306 45.8
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 1.2e-49 201.4 315 44.1
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 7.6e-49 198.7 306 45.8
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 9.9e-49 198.4 248 51.2
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 1.7e-48 197.6 291 45.0
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 3.8e-48 196.4 312 43.3
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 3.8e-48 196.4 248 50.0
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 1.1e-47 194.9 359 38.7
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 2.7e-46 190.3 173 61.3
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 1.0e-45 188.3 156 64.1
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 4.3e-44 183.0 368 38.0
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.3e-43 181.4 320 40.6
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 5.3e-42 176.0 358 37.4
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 6.9e-42 175.6 249 46.2
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.5e-41 174.5 320 39.7
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 2.6e-41 173.7 306 39.2
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 1.3e-40 171.4 251 45.8
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.7e-40 171.0 308 41.9
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 1.7e-40 171.0 266 42.9
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 1.9e-36 157.5 225 43.1
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 2.8e-35 153.7 212 49.5
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 3.0e-29 133.7 292 36.6
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 2.4e-26 124.0 189 41.3
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 2.2e-24 117.5 163 44.8
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 2.2e-24 117.5 238 32.4
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 1.2e-22 111.7 328 34.8
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 1.8e-21 107.8 271 34.3
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 1.2e-14 85.1 108 50.0
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 2.3e-13 80.9 101 48.5
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 2.3e-13 80.9 324 31.5
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 3.0e-13 80.5 126 45.2
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 3.4e-09 67.0 230 36.5
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 1.7e-08 64.7 230 36.1


User provided reference genes

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