Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G3466 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.3e-177 626.3 335 100.0
FAN03G2392 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.1e-168 596.7 339 95.3
FAN28G0502 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.3e-168 595.1 339 95.3
FAN13G1402 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.1e-167 592.4 339 94.7
FAN09G4582 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.4e-166 589.7 339 94.1
FAN27G2741 Fragaria x ananassa HOM05D007993 ORTHO05D000898 7.6e-165 583.9 339 94.1
FvH4_5g37871 Fragaria vesca HOM05D007993 ORTHO05D000898 9.9e-165 583.6 346 92.8
FAN20G2401 Fragaria x ananassa HOM05D007993 ORTHO05D000898 9.9e-165 583.6 339 92.9
FAN08G1236 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.7e-164 582.8 339 92.9
FAN28G0966 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.7e-164 582.8 339 93.2
FAN12G2805 Fragaria x ananassa HOM05D007993 ORTHO05D000898 6.4e-164 580.9 346 92.2
FAN14G0071 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.3e-160 568.5 339 91.4
FvH4_4g10125 Fragaria vesca HOM05D007993 ORTHO05D000898 4.0e-158 561.6 320 95.6
FvH4_2g04883 Fragaria vesca HOM05D007993 ORTHO05D000898 9.9e-157 557.0 335 91.9
FAN12G1044 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.9e-153 545.0 334 89.2
FAN04G1460 Fragaria x ananassa HOM05D007993 ORTHO05D000898 8.1e-151 537.3 339 87.9
FAN19G2351 Fragaria x ananassa HOM05D007993 ORTHO05D000898 9.0e-150 533.9 318 91.8
FvH4_1g29141 Fragaria vesca HOM05D007993 ORTHO05D000898 6.5e-148 527.7 335 87.8
FAN05G4402 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.2e-147 525.4 331 88.5
FAN16G0074 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.2e-139 498.8 276 92.8
FAN04G2812 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.3e-137 493.4 276 95.3
FvH4_4g28760 Fragaria vesca HOM05D007993 ORTHO05D000898 5.2e-105 385.2 341 68.0
FAN07G0486 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.7e-101 372.9 230 91.3
FAN28G2534 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.1e-81 307.8 159 98.1
FAN16G1291 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.7e-63 247.3 147 94.6
FAN28G0532 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.4e-62 243.4 147 95.9
FAN23G1460 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.3e-50 204.5 147 78.9
FAN23G1795 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.0e-44 184.9 93 100.0
RcHm_v2.0_Chr7g0204351 Rosa chinensis HOM05D007993 ORTHO05D000898 1.4e-38 164.5 176 48.3
FAN07G1300 Fragaria x ananassa HOM05D007993 ORTHO05D000898 5.1e-36 156.0 80 98.8
FAN17G1429 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.1e-29 134.0 195 38.5
FvH4_5g30680 Fragaria vesca HOM05D007993 ORTHO05D000898 1.5e-24 117.9 204 36.3
FvH4_3g26550 Fragaria vesca HOM05D007993 ORTHO05D000898 3.4e-24 116.7 203 35.0
FAN27G3022 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.4e-24 116.7 204 35.3
FAN06G0315 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.2e-23 114.0 204 35.3
FAN28G2991 Fragaria x ananassa HOM05D008674 ORTHO05D000898 3.2e-22 110.2 211 34.1
FAN21G3110 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.2e-21 108.2 201 34.3
FAN10G0819 Fragaria x ananassa HOM05D008674 ORTHO05D000898 4.6e-21 106.3 201 33.3
FAN16G3666 Fragaria x ananassa HOM05D008674 ORTHO05D000898 6.1e-21 105.9 190 34.2
FAN08G3199 Fragaria x ananassa HOM05D008674 ORTHO05D000898 7.9e-21 105.5 201 33.3
FvH4_7g03531 Fragaria vesca HOM05D007993 ORTHO05D000898 6.7e-20 102.4 178 37.1
FAN25G0376 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.9e-19 100.9 189 35.4
FAN27G2446 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.9e-19 100.9 196 33.7
FAN03G1695 Fragaria x ananassa HOM05D008674 ORTHO05D000898 5.7e-19 99.4 201 32.8
FAN23G1871 Fragaria x ananassa HOM05D007993 ORTHO05D000898 7.4e-19 99.0 46 100.0
FAN13G3014 Fragaria x ananassa HOM05D007993 ORTHO05D000898 9.7e-19 98.6 170 35.3
FAN09G2500 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.1e-17 95.1 344 30.2
FAN06G1622 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.8e-17 94.4 134 38.1
FAN04G1327 Fragaria x ananassa HOM05D008674 ORTHO05D000898 4.1e-17 93.2 164 32.9
FAN17G1842 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.2e-16 91.7 201 31.8
FAN04G2605 Fragaria x ananassa HOM05D008674 ORTHO05D000898 2.6e-16 90.5 182 33.0
FAN28G0320 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.3e-15 88.2 139 36.0
FAN07G0508 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.7e-15 87.8 105 42.9
FAN28G0955 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.7e-15 87.8 343 26.5
FvH4_7g12893 Fragaria vesca HOM05D007993 ORTHO05D000898 6.5e-15 85.9 155 34.8
FAN25G3499 Fragaria x ananassa HOM05D008674 ORTHO05D000898 4.2e-14 83.2 168 32.7
RcHm_v2.0_Chr6g0266661 Rosa chinensis HOM05D007993 ORTHO05D000898 2.1e-13 80.9 217 29.0
FAN24G1944 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.7e-13 80.5 168 33.3
FAN27G1870 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.6e-13 80.1 168 33.3
FAN20G1880 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.7e-13 79.7 168 32.7
FvH4_2g09911 Fragaria vesca HOM05D004096 ORTHO05D000898 7.9e-13 79.0 168 32.7
FAN06G1954 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.0e-12 77.0 212 26.4
RcHm_v2.0_Chr6g0266671 Rosa chinensis HOM05D004096 ORTHO05D000898 5.1e-12 76.3 171 31.0
Dinv07106 Davidia involucrata HOM05D008396 ORTHO05D000898 8.8e-12 75.5 176 29.0
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 8.8e-12 75.5 184 26.6
Prupe.7G070100 Prunus persica HOM05D004096 ORTHO05D000898 1.7e-10 71.2 168 28.6
Ciclev10033783m.g Citrus clementina HOM05D008396 ORTHO05D000898 2.8e-10 70.5 150 33.3
FAN01G3042 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.8e-10 70.5 114 37.7
Prupe.7G017400 Prunus persica HOM05D004096 ORTHO05D000898 4.8e-10 69.7 184 26.6
Dinv09269 Davidia involucrata HOM05D008396 ORTHO05D000898 6.3e-10 69.3 170 27.6
Dinv13152 Davidia involucrata HOM05D008396 ORTHO05D000898 6.3e-10 69.3 170 27.6
RcHm_v2.0_Chr2g0155601 Rosa chinensis HOM05D004096 ORTHO05D000898 6.3e-10 69.3 113 31.0
QL03p022565 Quercus lobata HOM05D007651 ORTHO05D000898 1.4e-09 68.2 144 24.3
FAN25G3804 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.4e-09 67.4 112 34.8
Dinv01422 Davidia involucrata HOM05D008396 ORTHO05D000898 4.1e-09 66.6 176 26.1
COL.COLO4_20373 Corchorus olitorius HOM05D007993 ORTHO05D000898 5.3e-09 66.2 190 26.3
Dinv14218 Davidia involucrata HOM05D008396 ORTHO05D000898 5.3e-09 66.2 183 25.7
Dinv15468 Davidia involucrata HOM05D008396 ORTHO05D000898 5.3e-09 66.2 185 26.5
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 5.3e-09 66.2 151 24.5
Ciclev10021259m.g Citrus clementina HOM05D008396 ORTHO05D000898 7.0e-09 65.9 131 33.6
Dinv08228 Davidia involucrata HOM05D008396 ORTHO05D000898 7.0e-09 65.9 183 27.9
Ciclev10002333m.g Citrus clementina HOM05D008396 ORTHO05D000898 9.1e-09 65.5 131 33.6
Dinv36340 Davidia involucrata HOM05D008396 ORTHO05D000898 9.1e-09 65.5 129 30.2
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 1.2e-08 65.1 146 30.8
FAN27G2070 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.2e-08 65.1 190 24.2
Dinv13142 Davidia involucrata HOM05D008396 ORTHO05D000898 2.6e-08 63.9 132 29.5
FAN18G0847 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.4e-08 63.5 146 27.4
RcHm_v2.0_Chr4g0423011 Rosa chinensis HOM05D004096 ORTHO05D000898 3.4e-08 63.5 152 23.0
Dinv35892 Davidia involucrata HOM05D008396 ORTHO05D000898 7.7e-08 62.4 125 28.8
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 7.7e-08 62.4 146 30.1
Dinv12671 Davidia involucrata HOM05D008396 ORTHO05D000898 1.0e-07 62.0 183 26.8
Dinv24488 Davidia involucrata HOM05D008396 ORTHO05D000898 1.0e-07 62.0 115 29.6
CiPaw.04G045400 Carya illinoinensis HOM05D007651 ORTHO05D001192 1.3e-07 61.6 133 32.3
Dinv00223 Davidia involucrata HOM05D008396 ORTHO05D000898 1.3e-07 61.6 130 30.8
Dinv10433 Davidia involucrata HOM05D008396 ORTHO05D000898 1.3e-07 61.6 130 30.8
RcHm_v2.0_Chr6g0268131 Rosa chinensis HOM05D010142 ORTHO05D012232 1.3e-07 61.6 124 26.6
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 2.2e-07 60.8 164 29.9
Dinv10220 Davidia involucrata HOM05D008396 ORTHO05D000898 2.9e-07 60.5 137 28.5
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 2.9e-07 60.5 172 27.9
Prupe.3G152100 Prunus persica HOM05D007651 ORTHO05D001192 2.9e-07 60.5 133 32.3
Duzib106G0239 Durio zibethinus HOM05D007651 ORTHO05D000898 3.8e-07 60.1 133 32.3
FAN16G0995 Fragaria x ananassa HOM05D010969 ORTHO05D015656 3.8e-07 60.1 130 26.9
RcHm_v2.0_Chr1g0347831 Rosa chinensis HOM05D004096 ORTHO05D000898 3.8e-07 60.1 152 22.4
FAN15G0550 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.0e-07 59.7 126 28.6
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 6.5e-07 59.3 133 31.6
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 6.5e-07 59.3 133 30.1
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 8.5e-07 58.9 133 29.3
Dinv40248 Davidia involucrata HOM05D008396 ORTHO05D000898 1.1e-06 58.5 94 33.0
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 1.1e-06 58.5 133 30.8
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 1.4e-06 58.2 172 28.5
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 1.4e-06 58.2 146 29.5
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.4e-06 58.2 146 28.8
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 1.9e-06 57.8 172 29.1
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 1.9e-06 57.8 148 29.1
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.9e-06 57.8 146 28.8
RcHm_v2.0_Chr6g0281911 Rosa chinensis HOM05D004096 ORTHO05D000898 1.9e-06 57.8 156 25.6
Dinv08235 Davidia involucrata HOM05D008396 ORTHO05D000898 2.5e-06 57.4 86 33.7
FAN13G2291 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.5e-06 57.4 126 27.8
Sabra10G0165800 Salix brachista HOM05D007651 ORTHO05D000898 2.5e-06 57.4 130 25.4
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 2.5e-06 57.4 133 30.8
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 4.2e-06 56.6 133 29.3
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 4.2e-06 56.6 133 31.6
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 4.2e-06 56.6 133 30.1
Potri.010G214500 Populus trichocarpa HOM05D007651 ORTHO05D000898 5.5e-06 56.2 130 25.4
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 5.5e-06 56.2 133 30.1
COL.COLO4_10042 Corchorus olitorius HOM05D007651 ORTHO05D000898 7.2e-06 55.8 146 29.5
FAN25G1450 Fragaria x ananassa HOM05D008674 ORTHO05D000898 7.2e-06 55.8 81 34.6
Gohir.A06G176700 Gossypium hirsutum HOM05D007651 ORTHO05D000898 7.2e-06 55.8 133 30.8
Gorai.010G218300 Gossypium raimondii HOM05D007651 ORTHO05D000898 9.4e-06 55.5 133 30.8


User provided reference genes

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