Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 4.2e-121 438.3 270 100.0
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 6.5e-74 281.6 237 75.1
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.2e-73 279.3 237 74.7
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.2e-73 279.3 237 74.7
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 1.1e-68 264.2 237 72.6
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 1.6e-64 250.4 237 70.0
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.1e-62 244.2 220 72.7
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 8.0e-56 221.5 247 70.4
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 1.7e-45 187.2 241 68.0
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 1.4e-44 184.1 255 62.0
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 7.2e-41 171.8 249 62.2
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 2.3e-39 166.8 246 59.3
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 8.9e-39 164.9 240 62.5
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 1.2e-38 164.5 241 63.5
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 1.2e-38 164.5 189 72.5
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 3.4e-38 162.9 239 63.6
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 4.4e-38 162.5 242 60.7
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 5.7e-38 162.2 248 46.8
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 7.5e-38 161.8 238 62.6
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.7e-37 160.6 252 60.3
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 2.9e-37 159.8 236 62.3
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 2.9e-37 159.8 237 53.2
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 3.7e-37 159.5 236 61.9
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 1.1e-36 157.9 223 54.3
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 1.1e-36 157.9 247 42.9
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 1.4e-36 157.5 255 58.8
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 1.4e-36 157.5 244 51.2
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 4.1e-36 156.0 255 52.5
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 5.4e-36 155.6 234 62.4
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 5.4e-36 155.6 245 51.8
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 5.4e-36 155.6 236 61.0
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 7.0e-36 155.2 247 59.9
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 7.0e-36 155.2 247 51.0
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.2e-35 154.5 199 57.3
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 1.6e-35 154.1 239 50.2
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 2.0e-35 153.7 238 52.1
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 2.7e-35 153.3 244 50.8
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 4.6e-35 152.5 253 50.2
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 4.6e-35 152.5 240 52.5
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 7.8e-35 151.8 248 50.4
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 1.3e-34 151.0 240 50.4
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 2.3e-34 150.2 240 50.0
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 2.3e-34 150.2 206 55.8
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 5.0e-34 149.1 244 59.4
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 5.0e-34 149.1 245 51.8
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 8.6e-34 148.3 207 50.2
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 8.6e-34 148.3 210 54.3
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 1.1e-33 147.9 244 51.2
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 1.1e-33 147.9 262 51.9
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 1.5e-33 147.5 239 51.0
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 1.9e-33 147.1 250 50.8
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 1.9e-33 147.1 246 51.2
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 2.5e-33 146.7 238 50.0
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 4.3e-33 146.0 200 54.5
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 5.6e-33 145.6 237 51.1
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 7.3e-33 145.2 192 69.3
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 7.3e-33 145.2 242 51.7
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 1.2e-32 144.4 259 46.3
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 1.2e-32 144.4 211 63.5
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 2.8e-32 143.3 257 47.5
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 3.6e-32 142.9 244 49.6
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 1.0e-31 141.4 200 55.0
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 4.0e-31 139.4 239 49.8
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 1.2e-30 137.9 197 65.0
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 1.2e-30 137.9 190 56.8
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 7.5e-30 135.2 245 47.8
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 4.9e-29 132.5 233 57.5
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 4.9e-29 132.5 198 53.0
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 2.4e-28 130.2 245 57.6
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 3.2e-28 129.8 245 47.3
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 7.0e-28 128.6 252 45.2
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 2.7e-27 126.7 183 55.2
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 2.7e-27 126.7 246 55.7
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 4.6e-27 125.9 238 48.3
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 2.3e-26 123.6 222 58.1
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 2.3e-26 123.6 222 58.1
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 2.3e-26 123.6 222 58.1
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 8.6e-26 121.7 163 57.7
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 1.9e-25 120.6 228 57.9
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 1.9e-25 120.6 229 57.6
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 2.5e-25 120.2 235 50.2
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 3.3e-25 119.8 163 57.7
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 7.3e-25 118.6 248 47.2
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 2.1e-24 117.1 182 54.4
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 3.6e-24 116.3 73 78.1
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 2.3e-23 113.6 179 64.2
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 4.0e-23 112.8 234 53.4
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 6.8e-23 112.1 192 61.5
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 2.0e-22 110.5 196 58.2
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 2.0e-22 110.5 187 42.8
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 4.4e-22 109.4 239 52.7
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 9.8e-22 108.2 56 91.1
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 1.3e-21 107.8 245 53.1
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 2.9e-21 106.7 244 51.2
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 3.7e-21 106.3 244 53.3
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 1.4e-20 104.4 246 52.8
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 3.2e-20 103.2 185 41.1
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 3.2e-20 103.2 230 45.2
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 6.0e-19 99.0 196 57.7
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 1.7e-18 97.4 202 57.4
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 1.9e-17 94.0 146 58.2
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 1.2e-16 91.3 112 49.1
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 1.2e-16 91.3 112 49.1
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 2.8e-16 90.1 107 53.3
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 4.4e-14 82.8 215 44.2
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 1.7e-13 80.9 106 47.2
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 2.2e-13 80.5 111 45.9
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 8.4e-13 78.6 64 59.4
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 1.9e-12 77.4 38 89.5
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 4.1e-12 76.3 38 89.5
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 1.5e-09 67.8 239 43.9
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 7.3e-09 65.5 103 41.7
Cre16.g687300 Chlamydomonas reinhardtii HOM05D006605 ORTHO05D008277 1.2e-08 64.7 60 56.7
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 1.2e-08 64.7 57 59.6
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 3.6e-08 63.2 50 60.0
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 8.1e-08 62.0 35 77.1


User provided reference genes

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