Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 7.8e-310 1066.2 521 100.0
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 4.3e-300 1033.9 521 97.1
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 3.1e-282 974.5 521 92.5
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.1e-274 949.5 577 83.7
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 4.8e-259 897.5 521 87.3
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 2.3e-253 878.6 442 97.1
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 7.2e-239 830.5 544 76.8
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 3.3e-231 805.1 535 75.0
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 3.6e-230 801.6 544 73.5
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 3.6e-230 801.6 544 72.4
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 4.0e-229 798.1 552 72.8
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 1.5e-228 796.2 544 73.3
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 1.7e-227 792.7 536 73.7
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 2.9e-227 792.0 532 74.1
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 3.7e-227 791.6 544 73.0
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 8.3e-227 790.4 536 73.1
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 1.9e-226 789.3 542 73.1
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 1.9e-226 789.3 543 72.6
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 1.9e-226 789.3 541 74.5
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 5.4e-226 787.7 520 76.3
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 2.7e-225 785.4 544 73.2
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 1.7e-224 782.7 544 72.6
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 2.3e-224 782.3 543 71.8
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 1.5e-223 779.6 535 72.1
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 5.6e-223 777.7 553 72.2
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 1.6e-222 776.2 542 72.7
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 3.1e-221 771.9 568 69.5
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 7.5e-220 767.3 544 70.8
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 3.7e-219 765.0 546 72.5
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 1.4e-218 763.1 541 70.2
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 3.2e-218 761.9 533 72.0
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 5.4e-218 761.1 545 70.5
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 5.4e-218 761.1 545 70.6
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 4.6e-217 758.1 627 64.4
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 6.6e-216 754.2 546 69.8
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 1.5e-215 753.1 534 72.7
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 2.3e-213 745.7 539 70.1
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 6.8e-213 744.2 544 70.2
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 8.9e-213 743.8 538 70.3
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 7.5e-212 740.7 552 68.8
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 9.9e-212 740.3 550 69.6
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 9.9e-212 740.3 537 70.8
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 1.3e-211 740.0 510 71.6
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.9e-211 738.8 537 70.8
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 5.4e-210 734.6 542 69.0
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.2e-209 733.4 537 68.2
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 3.5e-209 731.9 537 70.0
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 4.6e-209 731.5 547 69.1
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.0e-208 730.3 540 69.4
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 6.6e-208 727.6 532 68.8
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 6.6e-208 727.6 544 67.6
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 3.6e-206 721.8 543 67.0
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 4.7e-206 721.5 547 67.8
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 1.4e-205 719.9 550 67.1
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 2.4e-205 719.2 547 67.6
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 5.2e-205 718.0 551 67.2
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 8.9e-205 717.2 546 67.4
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 1.2e-204 716.8 546 67.2
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 2.0e-204 716.1 546 67.2
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 2.6e-204 715.7 544 68.6
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 2.6e-204 715.7 520 68.3
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 3.4e-204 715.3 547 67.3
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 4.4e-204 714.9 544 67.5
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 7.6e-204 714.1 551 66.2
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 2.2e-203 712.6 548 67.0
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 1.4e-202 709.9 553 66.0
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 9.2e-202 707.2 495 71.9
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 1.2e-201 706.8 554 65.2
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 2.1e-201 706.1 567 64.7
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 3.0e-200 702.2 534 68.9
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 3.9e-200 701.8 520 68.3
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 1.5e-199 699.9 520 67.9
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 9.9e-196 687.2 534 66.1
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.2e-195 686.0 563 63.4
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.2e-195 686.0 563 63.4
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 2.4e-194 682.6 622 60.9
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 3.6e-190 668.7 544 65.3
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 2.4e-189 666.0 532 65.2
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 2.9e-187 659.1 482 71.4
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 3.5e-185 652.1 498 66.3
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 5.1e-184 648.3 457 70.0
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 2.4e-181 639.4 493 63.7
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 5.5e-178 628.2 439 73.6
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.8e-174 615.9 602 55.6
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 4.0e-173 612.1 602 55.8
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 1.2e-172 610.5 541 61.6
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 3.7e-166 589.0 418 72.5
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.3e-163 580.5 285 96.8
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 1.9e-162 576.6 523 57.7
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 8.2e-158 561.2 545 52.8
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 4.5e-156 555.4 474 60.3
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.6e-151 539.7 539 53.8
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 2.2e-147 526.6 443 63.0
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 4.7e-137 492.3 340 74.1
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 7.0e-133 478.4 335 72.5
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 3.5e-124 449.5 504 49.6
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 3.6e-121 439.5 355 63.4
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.1e-117 427.9 885 32.2
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 3.9e-115 419.5 846 33.2
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 7.3e-114 415.2 964 30.6
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 1.6e-113 414.1 973 30.7
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.7e-113 412.5 893 31.6
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 3.1e-112 409.8 291 67.7
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.6e-105 387.5 316 65.5
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 1.8e-104 384.0 311 62.7
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 3.1e-104 383.3 275 67.6
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.7e-102 377.5 239 79.1
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 2.0e-95 354.0 245 69.0
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 2.3e-91 340.5 267 65.2
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 5.6e-82 309.3 201 78.1
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 4.2e-69 266.5 284 51.1
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 5.4e-69 266.2 175 77.1
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.3e-67 260.8 279 53.0
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 9.4e-37 159.1 129 65.9
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 2.8e-33 147.5 790 21.9
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 2.9e-30 137.5 80 82.5
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 2.9e-22 110.9 102 56.9
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 1.9e-21 108.2 247 27.1
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 1.2e-18 99.0 70 74.3
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.2e-17 94.7 255 27.8
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 4.8e-17 93.6 96 55.2
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 3.2e-13 80.9 333 24.3
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 7.2e-13 79.7 117 48.7
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.1e-08 65.9 39 79.5
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 9.2e-08 62.8 40 70.0


User provided reference genes

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