Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 6.0e-124 447.6 235 100.0
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 4.0e-120 434.9 235 97.9
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.6e-119 432.2 240 96.2
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 4.9e-118 427.9 233 93.1
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 3.2e-117 425.2 234 96.6
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 5.4e-101 371.3 237 80.6
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 3.3e-74 282.3 239 61.9
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 1.0e-70 270.8 239 61.1
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 3.7e-65 252.3 240 58.3
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 6.3e-65 251.5 143 98.6
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 6.3e-65 251.5 237 57.8
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 2.4e-64 249.6 241 56.8
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 2.4e-64 249.6 241 56.8
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 5.3e-64 248.4 238 57.6
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 3.4e-63 245.7 246 56.1
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 1.7e-62 243.4 243 56.0
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.9e-61 240.0 242 57.4
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 1.9e-61 240.0 235 57.4
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 4.2e-61 238.8 235 54.9
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 9.4e-61 237.7 242 57.0
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 9.4e-61 237.7 246 53.7
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.6e-60 236.9 241 56.8
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 3.6e-60 235.7 235 54.5
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 4.6e-60 235.3 237 56.1
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 1.0e-59 234.2 243 55.6
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 3.9e-59 232.3 243 54.3
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 8.8e-59 231.1 243 54.3
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 9.7e-58 227.6 215 58.1
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 9.7e-58 227.6 237 51.5
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 1.7e-57 226.9 245 52.7
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 2.2e-57 226.5 235 54.0
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 3.7e-57 225.7 244 52.9
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 6.3e-57 224.9 244 52.9
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 1.1e-56 224.2 221 54.8
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 1.1e-56 224.2 247 52.2
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 1.4e-56 223.8 245 50.6
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 1.8e-56 223.4 246 50.8
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 3.1e-56 222.6 235 50.6
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 6.9e-56 221.5 249 53.0
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 6.9e-56 221.5 236 52.5
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 1.5e-55 220.3 246 50.4
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 2.0e-55 219.9 240 54.2
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 3.4e-55 219.2 236 53.4
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 3.4e-55 219.2 240 54.2
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 4.5e-55 218.8 241 51.9
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 4.5e-55 218.8 245 51.8
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 4.5e-55 218.8 242 53.7
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 7.7e-55 218.0 246 50.8
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 1.0e-54 217.6 245 51.4
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 2.9e-54 216.1 247 51.4
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 3.8e-54 215.7 236 51.7
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 3.8e-54 215.7 203 56.2
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 5.0e-54 215.3 246 50.4
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 8.5e-54 214.5 237 51.9
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 1.1e-53 214.2 263 47.9
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 1.1e-53 214.2 244 51.2
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 1.4e-53 213.8 243 51.9
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 1.9e-53 213.4 247 51.8
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 3.2e-53 212.6 162 67.9
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 7.2e-53 211.5 240 51.7
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 1.6e-52 210.3 248 51.2
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 2.7e-52 209.5 241 50.6
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 2.7e-52 209.5 251 49.0
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 2.7e-52 209.5 245 48.6
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 3.6e-52 209.1 227 50.7
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 6.1e-52 208.4 242 49.2
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 7.9e-52 208.0 232 50.9
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 1.4e-51 207.2 241 49.4
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 1.8e-51 206.8 245 48.6
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 1.8e-51 206.8 236 50.4
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 3.0e-51 206.1 244 48.8
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 5.1e-51 205.3 239 49.4
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 5.1e-51 205.3 237 51.5
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 5.1e-51 205.3 242 50.4
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 6.7e-51 204.9 245 49.4
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 6.7e-51 204.9 240 48.3
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 8.8e-51 204.5 236 51.3
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 2.0e-50 203.4 220 51.8
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 2.0e-50 203.4 236 50.8
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 2.6e-50 203.0 229 49.8
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 3.3e-50 202.6 246 49.6
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 4.4e-50 202.2 241 49.0
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 5.7e-50 201.8 245 49.8
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 7.4e-50 201.4 259 47.9
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 9.7e-50 201.1 246 49.2
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 9.7e-50 201.1 252 48.8
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 6.3e-49 198.4 237 47.3
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 8.2e-49 198.0 238 45.8
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.1e-48 197.6 215 50.2
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 1.4e-48 197.2 236 45.3
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 1.8e-48 196.8 244 48.8
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 1.8e-48 196.8 244 48.8
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 1.8e-48 196.8 240 49.2
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 1.8e-48 196.8 249 46.6
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 5.3e-48 195.3 225 48.4
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 5.3e-48 195.3 235 47.2
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 7.0e-48 194.9 252 47.6
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 7.0e-48 194.9 213 50.7
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 9.1e-48 194.5 245 45.3
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 9.1e-48 194.5 235 48.1
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 9.1e-48 194.5 244 47.1
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 1.6e-47 193.7 234 47.4
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 3.5e-47 192.6 159 59.1
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 3.5e-47 192.6 230 46.1
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 4.5e-47 192.2 248 47.2
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 4.5e-47 192.2 218 49.1
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 7.7e-47 191.4 213 50.2
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 1.3e-46 190.7 239 46.0
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 2.2e-46 189.9 160 58.8
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 2.9e-46 189.5 220 49.5
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 2.9e-46 189.5 245 45.3
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 5.0e-46 188.7 191 56.0
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 8.5e-46 188.0 235 48.1
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 1.5e-45 187.2 247 45.7
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 1.9e-45 186.8 244 45.9
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 1.9e-45 186.8 235 45.5
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 2.5e-45 186.4 243 44.9
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 3.2e-45 186.0 215 50.7
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 5.5e-45 185.3 244 45.9
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 7.2e-45 184.9 235 45.1
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 1.2e-44 184.1 242 46.3
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 2.1e-44 183.3 250 44.8
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 2.7e-44 183.0 244 45.1
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 6.1e-44 181.8 238 47.9
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 6.7e-43 178.3 235 44.7
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 4.4e-42 175.6 172 57.6
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 6.3e-41 171.8 242 44.6
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 1.8e-40 170.2 218 45.4
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 2.4e-40 169.9 262 42.4
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 3.1e-40 169.5 140 60.7
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 3.1e-40 169.5 235 44.3
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 2.0e-39 166.8 238 46.2
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 4.5e-39 165.6 153 54.9
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 5.5e-37 158.7 211 43.1
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 6.8e-35 151.8 155 54.2
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.5e-34 150.6 243 41.6
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 3.1e-32 142.9 248 39.9
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 2.9e-30 136.3 251 37.1
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 2.1e-28 130.2 208 40.9
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 6.1e-28 128.6 136 49.3
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 9.8e-26 121.3 64 89.1
Dinv28349 Davidia involucrata HOM05D004719 ORTHO05D005519 5.4e-24 115.5 77 70.1
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 7.0e-24 115.2 239 36.0
QL04p064474 Quercus lobata HOM05D000013 ORTHO05D000011 1.5e-21 107.5 58 81.0
FvH4_7g16570 Fragaria vesca HOM05D004719 ORTHO05D005519 3.3e-21 106.3 56 87.5
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 3.3e-21 106.3 54 92.6
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 4.7e-20 102.4 178 43.3
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 4.7e-20 102.4 207 38.6
BolC3t14188H Brassica oleracea HOM05D004719 ORTHO05D005519 9.2e-16 88.2 97 51.5
FvH4_6g34200 Fragaria vesca HOM05D004719 ORTHO05D005519 9.2e-16 88.2 46 89.1
FAN16G3662 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.1e-13 81.3 49 79.6
Solyc06g036500.1 Solanum lycopersicum HOM05D004719 ORTHO05D005519 2.5e-13 80.1 76 52.6
FAN06G3132 Fragaria x ananassa HOM05D004719 ORTHO05D005519 6.8e-11 72.0 45 75.6
CDE09G0250 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 8.9e-11 71.6 50 62.0
CBR_g84869 Chara braunii HOM05D004719 ORTHO05D005519 2.2e-09 67.0 59 55.9
Hund30245 Selenicereus undatus HOM05D004719 ORTHO05D005519 2.2e-09 67.0 104 45.2
CBR_g83324 Chara braunii HOM05D004719 ORTHO05D005519 1.9e-08 63.9 68 42.6
FAN25G3581 Fragaria x ananassa HOM05D017504 ORTHO05D022678 1.2e-07 61.2 30 93.3
Sopen06g012490 Solanum pennellii HOM05D004719 ORTHO05D005519 5.0e-06 55.8 50 52.0


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