Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1104 Fragaria x ananassa HOM05D004910 ORTHO05D019205 4.8e-157 557.8 277 100.0
FAN09G4154 Fragaria x ananassa HOM05D000104 ORTHO05D006397 5.6e-81 305.1 204 81.4
FAN15G0988 Fragaria x ananassa HOM05D000104 ORTHO05D019205 1.6e-80 303.5 198 83.3
FvH4_6g01581 Fragaria vesca HOM05D000104 ORTHO05D006397 6.9e-79 298.1 199 80.4
FAN14G4089 Fragaria x ananassa HOM05D000104 ORTHO05D006397 2.0e-78 296.6 199 79.9
FAN14G5045 Fragaria x ananassa HOM05D000104 ORTHO05D006397 2.0e-78 296.6 199 79.9
FAN02G0967 Fragaria x ananassa HOM05D000104 ORTHO05D006397 2.9e-77 292.7 199 79.9
FAN05G1722 Fragaria x ananassa HOM05D000104 ORTHO05D006397 1.2e-75 287.3 199 78.4
FAN05G2560 Fragaria x ananassa HOM05D000104 ORTHO05D006397 1.2e-75 287.3 199 78.4
FAN02G1679 Fragaria x ananassa HOM05D000104 ORTHO05D019205 6.5e-61 238.4 140 88.6
RcHm_v2.0_Chr3g0449401 Rosa chinensis HOM05D000104 ORTHO05D006397 1.6e-51 207.2 229 56.3
Prupe.6G351600 Prunus persica HOM05D000104 ORTHO05D006397 6.3e-40 168.7 229 45.9
MD00G1149200 Malus domestica HOM05D000104 ORTHO05D006397 5.9e-38 162.2 181 53.6
FAN28G2922 Fragaria x ananassa HOM05D000104 ORTHO05D019205 7.7e-38 161.8 95 87.4
MD04G1232200 Malus domestica HOM05D000104 ORTHO05D006397 1.7e-37 160.6 209 48.8
QL03p029602 Quercus lobata HOM05D000104 ORTHO05D006397 1.8e-26 124.0 239 39.3
FAN16G3191 Fragaria x ananassa HOM05D000104 ORTHO05D019205 3.0e-26 123.2 103 68.0
CANSAT54G2768 Cannabis sativa HOM05D000104 ORTHO05D006397 1.2e-25 121.3 201 42.3
CiPaw.08G118700 Carya illinoinensis HOM05D000104 ORTHO05D006397 1.2e-25 121.3 226 38.1
Potri.013G048500 Populus trichocarpa HOM05D000104 ORTHO05D006397 1.1e-20 104.8 207 37.7
TAR362G0360 Trochodendron aralioides HOM05D000104 ORTHO05D006397 7.2e-20 102.1 255 34.9
GSVIVG01023393001 Vitis vinifera HOM05D000104 ORTHO05D006397 7.2e-20 102.1 251 32.7
arahy.Tifrunner.gnm1.ann1.21AGFE Arachis hypogaea HOM05D000104 ORTHO05D006397 2.8e-19 100.1 231 35.9
Sabra13G0044700 Salix brachista HOM05D000104 ORTHO05D006397 6.1e-19 99.0 218 34.9
arahy.Tifrunner.gnm1.ann1.N8MZL6 Arachis hypogaea HOM05D000104 ORTHO05D006397 1.0e-18 98.2 231 35.9
Manes.09G147000 Manihot esculenta HOM05D000104 ORTHO05D006397 1.0e-18 98.2 208 36.5
Lalb_Chr06g0168221 Lupinus albus HOM05D000104 ORTHO05D006397 4.0e-18 96.3 218 34.9
Atru.chr2.1068 Acer truncatum HOM05D000104 ORTHO05D006397 1.2e-17 94.7 235 33.6
Potri.019G021500 Populus trichocarpa HOM05D000104 ORTHO05D006397 1.5e-17 94.4 208 38.5
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 7.5e-17 92.0 53 81.1
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 7.5e-17 92.0 53 81.1
ClCG11G010390 Citrullus lanatus HOM05D000104 ORTHO05D006397 9.8e-17 91.7 211 33.6
Haze_04401 Corylus avellana HOM05D000104 ORTHO05D006397 9.8e-17 91.7 134 47.0
CSS0004215 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006397 4.9e-16 89.4 229 33.6
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.4e-15 87.8 53 79.2
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.8e-15 87.4 53 79.2
Lj2C45G10 Lonicera japonica HOM05D000104 ORTHO05D006397 3.1e-15 86.7 210 32.4
Sabra19G0033000 Salix brachista HOM05D000104 ORTHO05D006397 3.1e-15 86.7 210 35.7
Glyma.10G165000 Glycine max HOM05D000104 ORTHO05D006397 4.1e-15 86.3 222 32.0
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 5.4e-15 85.9 53 77.4
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 7.0e-15 85.5 53 77.4
Eucgr.H04218 Eucalyptus grandis HOM05D000104 ORTHO05D006397 9.2e-15 85.1 216 36.1
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 2.0e-14 84.0 53 73.6
MSTRG.27435 Avicennia marina HOM05D000104 ORTHO05D006397 4.5e-14 82.8 172 36.6
Ca_10025_v3 Cicer arietinum L. HOM05D000104 ORTHO05D006397 7.7e-14 82.0 218 31.2
Glyma.20G227200 Glycine max HOM05D000104 ORTHO05D006397 7.7e-14 82.0 222 31.1
TWI60G0140 Tripterygium wilfordii HOM05D000104 ORTHO05D006397 7.7e-14 82.0 180 36.7
vmacro10381 Vaccinium macrocarpon HOM05D000104 ORTHO05D006397 1.3e-13 81.3 213 30.5
Actinidia34760 Actinidia chinensis HOM05D000104 ORTHO05D006397 1.7e-13 80.9 220 32.7
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 2.9e-13 80.1 53 71.7
MELO3C008639.2 Cucumis melo HOM05D000104 ORTHO05D006397 1.1e-12 78.2 226 31.0
CsaV3_2G009970 Cucumis sativus L. HOM05D000104 ORTHO05D006397 1.1e-12 78.2 226 31.0
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 1.5e-12 77.8 51 66.7
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 1.9e-12 77.4 51 70.6
Psat4g216280 Pisum sativum HOM05D004910 ORTHO05D006864 1.9e-12 77.4 50 68.0
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 2.5e-12 77.0 51 66.7
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 2.5e-12 77.0 51 66.7
Thecc.05G267600 Theobroma cacao HOM05D000104 ORTHO05D006397 2.5e-12 77.0 225 31.6
Rhsim09G0133300 Rhododendron simsii HOM05D000104 ORTHO05D006397 3.3e-12 76.6 174 31.0
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 3.3e-12 76.6 51 64.7
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 4.3e-12 76.3 51 64.7
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 5.6e-12 75.9 51 62.7
RcHm_v2.0_Chr4g0407941 Rosa chinensis HOM05D004910 ORTHO05D019205 5.6e-12 75.9 54 70.4
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 7.3e-12 75.5 51 64.7
Gohir.A11G245400 Gossypium hirsutum HOM05D000104 ORTHO05D006397 7.3e-12 75.5 227 30.8
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 1.2e-11 74.7 55 65.5
CSS0010640 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.1e-11 73.9 54 63.0
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.1e-11 73.9 54 63.0
COL.COLO4_15520 Corchorus olitorius HOM05D000104 ORTHO05D006397 2.1e-11 73.9 220 28.6
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 2.1e-11 73.9 51 62.7
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 2.1e-11 73.9 54 64.8
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 2.1e-11 73.9 51 62.7
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 2.1e-11 73.9 51 64.7
RcHm_v2.0_Chr4g0408121 Rosa chinensis HOM05D004910 ORTHO05D006864 2.8e-11 73.6 56 69.6
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 2.8e-11 73.6 54 64.8
VMungo0720G2029 Vigna mungo HOM05D000104 ORTHO05D006397 2.8e-11 73.6 229 26.6
Migut.F02058 Erythranthe guttata HOM05D000104 ORTHO05D006397 4.7e-11 72.8 161 37.3
Hma1.2p1_0353F.1_g133240 Hydrangea macrophylla HOM05D004910 ORTHO05D006864 4.7e-11 72.8 57 61.4
Aqoxy5G00143 Aquilegia oxysepala HOM05D000104 ORTHO05D006397 6.1e-11 72.4 251 29.9
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 6.1e-11 72.4 51 64.7
Psat6g144360 Pisum sativum HOM05D000104 ORTHO05D006397 8.0e-11 72.0 184 32.1
Actinidia38931 Actinidia chinensis HOM05D000104 ORTHO05D006397 1.4e-10 71.2 220 32.7
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 1.4e-10 71.2 54 59.3
Nitab4.5_0002088g0030 Nicotiana tabacum HOM05D000104 ORTHO05D006397 1.4e-10 71.2 194 33.5
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 1.8e-10 70.9 54 61.1
PGR004G1676 Punica granatum HOM05D000104 ORTHO05D006397 1.8e-10 70.9 213 33.3
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 2.3e-10 70.5 51 58.8
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 2.3e-10 70.5 54 61.1
Duzib128G0174 Durio zibethinus HOM05D000104 ORTHO05D006397 2.3e-10 70.5 224 31.2
Gorai.007G273900 Gossypium raimondii HOM05D000104 ORTHO05D006397 3.0e-10 70.1 236 30.5
Gohir.D11G255300 Gossypium hirsutum HOM05D000104 ORTHO05D006397 4.0e-10 69.7 219 31.1
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 5.2e-10 69.3 55 61.8
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 5.2e-10 69.3 54 55.6
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 1.2e-09 68.2 53 60.4
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 1.2e-09 68.2 51 60.8
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 1.2e-09 68.2 51 62.7
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 2.0e-09 67.4 54 55.6
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 2.6e-09 67.0 48 64.6
SEGI_03249 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 2.6e-09 67.0 53 52.8
Cpa.g.sc73.58 Carica papaya HOM05D004910 ORTHO05D006864 3.4e-09 66.6 51 54.9
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 3.4e-09 66.6 51 60.8
Lj5g0000218 Lotus japonicus HOM05D000104 ORTHO05D006397 3.4e-09 66.6 206 31.6
Medtr1g080420 Medicago truncatula HOM05D000104 ORTHO05D006397 3.4e-09 66.6 184 29.3
Nitab4.5_0000061g0050 Nicotiana tabacum HOM05D000104 ORTHO05D006397 3.4e-09 66.6 196 34.7
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 3.4e-09 66.6 56 55.4
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 4.4e-09 66.2 54 59.3
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 4.4e-09 66.2 49 59.2
Phvul.L001951 Phaseolus vulgaris HOM05D000104 ORTHO05D006397 4.4e-09 66.2 228 26.3
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 4.4e-09 66.2 56 53.6
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 4.4e-09 66.2 54 57.4
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 4.4e-09 66.2 54 59.3
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 5.7e-09 65.9 49 61.2
SGA_v2.0_scaffold62G21465 Striga asiatica HOM05D000104 ORTHO05D006397 7.5e-09 65.5 158 37.3
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 7.5e-09 65.5 54 51.9
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 9.8e-09 65.1 51 56.9
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 9.8e-09 65.1 48 62.5
Peaxi162Scf00373g01415 Petunia axillaris HOM05D000104 ORTHO05D006397 9.8e-09 65.1 156 35.3
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 1.3e-08 64.7 54 53.7
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 1.7e-08 64.3 51 56.9
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 1.7e-08 64.3 54 51.9
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 1.7e-08 64.3 51 58.8
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 2.2e-08 63.9 51 58.8
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 2.2e-08 63.9 48 62.5
Hund07179 Selenicereus undatus HOM05D000104 ORTHO05D006397 2.9e-08 63.5 170 31.8
ATR0787G043 Amborella trichopoda HOM05D000104 ORTHO05D006397 4.9e-08 62.8 180 34.4
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 4.9e-08 62.8 54 55.6
Sc09g0001860 Simmondsia chinensis HOM05D000104 ORTHO05D006397 4.9e-08 62.8 208 29.8
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 4.9e-08 62.8 48 60.4
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 4.9e-08 62.8 48 60.4
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 6.4e-08 62.4 51 58.8
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 8.3e-08 62.0 54 50.0
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 8.3e-08 62.0 49 59.2
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 8.3e-08 62.0 49 59.2
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 8.3e-08 62.0 54 53.7
Solyc04g050150.4 Solanum lycopersicum HOM05D000104 ORTHO05D006397 8.3e-08 62.0 154 35.7
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 1.1e-07 61.6 51 54.9
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 1.1e-07 61.6 49 57.1
Nn1g02987 Nelumbo nucifera HOM05D000104 ORTHO05D006397 1.1e-07 61.6 39 74.4
SalBow1G3403 Salvia bowleyana HOM05D000104 ORTHO05D006397 1.1e-07 61.6 39 69.2
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 1.1e-07 61.6 51 54.9
Ciclev10030509m.g Citrus clementina HOM05D000104 ORTHO05D006397 1.8e-07 60.8 194 30.9
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 1.8e-07 60.8 54 53.7
PSO764G0152 Papaver somniferum HOM05D000104 ORTHO05D006397 1.8e-07 60.8 129 33.3
Sopen04g020860 Solanum pennellii HOM05D000104 ORTHO05D006397 1.8e-07 60.8 154 35.1
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 1.8e-07 60.8 48 56.2
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 2.4e-07 60.5 49 55.1
Dinv12942 Davidia involucrata HOM05D000104 ORTHO05D006397 3.2e-07 60.1 137 35.8
TPR.G26620 Trifolium pratense HOM05D000104 ORTHO05D006397 3.2e-07 60.1 39 71.8
unitig_37.g12285 Utricularia gibba HOM05D000104 ORTHO05D006397 5.4e-07 59.3 136 36.0
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 1.2e-06 58.2 50 48.0
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 2.0e-06 57.4 54 48.1
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 2.0e-06 57.4 51 49.0
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 2.0e-06 57.4 51 47.1
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 3.5e-06 56.6 51 51.0
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 4.6e-06 56.2 51 52.9
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 4.6e-06 56.2 49 53.1


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