Gene: MSTRG.27435

General Information

Structural Information

  • Species Avicennia marina
  • Gene Identifier MSTRG.27435
  • Transcript Identifier MSTRG.27435.2
  • Gene Type Coding gene
  • Location ScioBoG_8578_HRSCAF_8617 : 8838585-8856891 : positive

Gene Family Information

  • ID HOM05D000104
  • #Genes/#Species 3097/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • tid MSTRG.27435.2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc04g050150.4
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G08600
GO:1900049
ISO
PLAZA Integrative Orthologyregulation of histone exchange AT1G08600
GO:0043007
ISO
PLAZA Integrative Orthologymaintenance of rDNA AT1G08600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc04g050150.4
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G08600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G08600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR000330 SNF2, N-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR044574 ATPase ARIP4-like
IPR038718 SNF2-like, N-terminal domain superfamily
Mapman id Description
12.4.8.1.2 Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad54-like group.chromatin remodeling factor (ATRX)