Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 0.0e+00 1206.8 662 100.0
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 5.0e-285 984.2 619 89.8
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.4e-282 976.1 662 85.0
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 4.1e-247 858.2 554 88.1
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.0e-246 855.9 676 75.4
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 1.6e-227 793.1 620 74.7
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.0e-192 677.6 388 95.4
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 5.3e-186 655.2 617 63.5
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 9.4e-175 617.8 616 61.9
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 8.8e-157 558.1 490 69.0
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 3.0e-128 463.4 659 46.4
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 3.6e-126 456.4 659 45.2
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 8.9e-125 451.8 654 44.0
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 4.9e-123 446.0 692 43.2
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 2.1e-118 430.6 653 44.3
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 2.8e-118 430.3 658 42.7
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 3.6e-118 429.9 665 43.9
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 5.2e-117 426.0 640 44.1
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 5.2e-117 426.0 640 44.1
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 2.0e-116 424.1 634 43.1
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 4.4e-116 422.9 640 43.6
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 2.4e-114 417.2 611 44.2
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 5.4e-114 416.0 656 46.8
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 7.3e-111 405.6 656 42.8
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 2.1e-110 404.1 614 44.5
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 3.6e-110 403.3 628 44.6
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 4.0e-109 399.8 651 41.0
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 2.2e-107 394.0 607 42.8
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 2.2e-107 394.0 711 39.4
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 8.4e-107 392.1 709 38.6
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 1.9e-106 391.0 711 39.0
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 2.4e-106 390.6 711 39.2
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 2.3e-104 384.0 693 39.1
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 3.0e-104 383.6 704 39.5
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 6.6e-104 382.5 687 38.6
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 4.3e-103 379.8 621 42.0
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 1.6e-102 377.9 683 38.7
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 2.1e-102 377.5 699 41.9
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 2.8e-102 377.1 614 42.0
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 8.1e-102 375.6 692 39.5
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 6.9e-101 372.5 647 40.8
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 7.6e-100 369.0 651 44.2
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 1.6e-97 361.3 688 37.5
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 2.1e-97 360.9 620 40.8
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 2.7e-97 360.5 611 42.9
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 3.0e-96 357.1 635 39.4
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 5.1e-96 356.3 588 42.9
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 9.6e-95 352.1 664 37.8
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 8.1e-94 349.0 727 41.4
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 1.4e-93 348.2 794 34.4
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 6.9e-93 345.9 637 37.8
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.2e-92 345.1 623 43.8
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.5e-92 344.7 529 47.8
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 7.1e-90 335.9 611 38.3
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 1.2e-89 335.1 650 37.7
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 1.6e-89 334.7 696 37.4
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 1.0e-88 332.0 634 37.5
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 1.6e-86 324.7 308 56.5
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 2.1e-86 324.3 686 37.9
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 3.1e-85 320.5 707 34.5
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 9.0e-85 318.9 645 36.0
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 9.0e-85 318.9 650 37.7
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 2.6e-84 317.4 670 36.9
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 2.9e-83 313.9 574 36.9
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 6.5e-83 312.8 637 37.7
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.1e-82 312.0 638 38.1
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 7.1e-82 309.3 630 38.1
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 1.9e-79 301.2 642 35.7
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 9.6e-79 298.9 627 36.8
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 1.6e-78 298.1 608 36.2
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 2.4e-77 294.3 593 38.3
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 3.1e-77 293.9 545 42.0
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 3.1e-77 293.9 643 36.1
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 2.9e-75 287.3 323 49.2
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 3.8e-75 287.0 608 36.2
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 6.5e-75 286.2 658 33.7
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 9.3e-74 282.3 662 33.2
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 1.2e-73 282.0 265 55.8
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 2.7e-73 280.8 515 38.1
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 2.3e-72 277.7 459 40.3
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 6.7e-72 276.2 652 34.4
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 1.6e-70 271.6 462 38.7
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 2.8e-70 270.8 673 33.0
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 8.2e-70 269.2 347 49.6
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 1.4e-69 268.5 622 34.2
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 1.8e-69 268.1 314 48.7
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 2.4e-69 267.7 714 33.2
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 2.6e-68 264.2 626 34.5
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 6.5e-67 259.6 621 33.7
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 6.7e-64 249.6 624 34.0
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 1.5e-63 248.4 457 38.1
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 1.1e-58 232.3 309 46.3
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 7.9e-57 226.1 196 62.2
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 3.9e-56 223.8 235 54.0
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 2.8e-54 217.6 624 32.2
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 3.7e-54 217.2 223 51.6
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 4.8e-54 216.9 621 31.6
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 8.2e-54 216.1 610 33.1
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 7.7e-52 209.5 622 32.0
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 7.7e-52 209.5 622 32.0
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 7.7e-52 209.5 622 32.0
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 2.5e-50 204.5 634 31.4
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 7.2e-50 203.0 671 32.6
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 1.8e-48 198.4 475 34.5
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 2.2e-46 191.4 484 35.3
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.6e-44 185.3 177 54.2
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 1.1e-42 179.1 128 68.0
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 6.1e-41 173.3 135 64.4
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 4.8e-38 163.7 481 32.4
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 1.4e-37 162.2 336 39.6
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.9e-27 127.9 423 30.0
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 1.1e-26 125.9 288 35.4
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 1.8e-24 118.6 684 24.4
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 8.9e-24 116.3 206 40.8
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 2.0e-23 115.2 292 32.5
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 3.4e-23 114.4 323 30.7
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 4.9e-22 110.5 369 29.0
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 9.2e-21 106.3 121 49.6
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 1.2e-20 105.9 82 59.8
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 7.3e-18 96.7 261 31.8
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 5.8e-15 87.0 234 35.5
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 1.3e-14 85.9 249 29.7
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 8.1e-09 66.6 83 39.8
THA.LOC109117177 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 7.5e-07 60.1 249 25.3
CBR_g41780 Chara braunii HOM05D000019 ORTHO05D000048 9.8e-07 59.7 56 53.6
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 8.3e-06 56.6 170 31.2


User provided reference genes

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