Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2814 Fragaria x ananassa HOM05D007405 ORTHO05D009256 3.2e-15 86.7 42 100.0
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.6e-14 84.3 40 100.0
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.6e-14 84.3 40 100.0
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 1.6e-14 84.3 40 100.0
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 4.6e-14 82.8 40 95.0
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 4.6e-14 82.8 40 95.0
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 1.0e-13 81.6 40 92.5
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 1.0e-13 81.6 39 94.9
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.3e-13 81.3 40 97.5
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 1.7e-13 80.9 40 95.0
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 2.3e-13 80.5 40 92.5
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 2.3e-13 80.5 40 95.0
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.3e-13 80.5 40 95.0
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.3e-13 80.5 40 95.0
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 2.3e-13 80.5 39 92.3
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 5.1e-13 79.3 39 92.3
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 5.1e-13 79.3 40 90.0
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 6.6e-13 79.0 40 90.0
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 6.6e-13 79.0 40 90.0
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 8.7e-13 78.6 40 90.0
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 8.7e-13 78.6 40 90.0
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 1.1e-12 78.2 40 92.5
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 1.5e-12 77.8 40 90.0
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 1.9e-12 77.4 39 89.7
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 1.9e-12 77.4 39 92.3
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 2.5e-12 77.0 40 87.5
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 2.5e-12 77.0 39 89.7
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 3.3e-12 76.6 39 89.7
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 4.3e-12 76.3 39 89.7
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 5.6e-12 75.9 39 89.7
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 5.6e-12 75.9 39 87.2
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 5.6e-12 75.9 40 87.5
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 5.6e-12 75.9 40 87.5
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 7.3e-12 75.5 39 87.2
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 7.3e-12 75.5 40 87.5
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 7.3e-12 75.5 39 87.2
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 9.6e-12 75.1 40 90.0
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 9.6e-12 75.1 40 85.0
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 9.6e-12 75.1 39 87.2
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 1.3e-11 74.7 39 89.7
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 1.3e-11 74.7 40 85.0
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 1.3e-11 74.7 40 85.0
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 1.3e-11 74.7 39 89.7
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 1.3e-11 74.7 39 87.2
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 1.3e-11 74.7 40 87.5
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 1.3e-11 74.7 39 89.7
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 1.6e-11 74.3 39 84.6
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 2.1e-11 73.9 39 87.2
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 2.1e-11 73.9 39 87.2
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 2.8e-11 73.6 39 89.7
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 2.8e-11 73.6 39 87.2
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 2.8e-11 73.6 38 86.8
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 2.8e-11 73.6 40 85.0
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 4.8e-11 72.8 40 82.5
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 6.2e-11 72.4 39 87.2
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 6.2e-11 72.4 39 84.6
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 8.1e-11 72.0 38 84.2
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 8.1e-11 72.0 39 87.2
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 8.1e-11 72.0 40 85.0
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 1.1e-10 71.6 36 91.7
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 1.1e-10 71.6 36 91.7
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 1.1e-10 71.6 38 86.8
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 1.4e-10 71.2 38 84.2
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 1.4e-10 71.2 35 91.4
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 1.4e-10 71.2 38 84.2
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 1.8e-10 70.9 39 82.1
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 1.8e-10 70.9 39 82.1
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 1.8e-10 70.9 39 82.1
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 1.8e-10 70.9 40 82.5
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 2.4e-10 70.5 36 88.9
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 2.4e-10 70.5 36 88.9
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 2.4e-10 70.5 36 88.9
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 2.4e-10 70.5 36 88.9
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 2.4e-10 70.5 38 84.2
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 4.0e-10 69.7 39 79.5
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 5.3e-10 69.3 36 88.9
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 9.0e-10 68.6 35 88.6
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 1.2e-09 68.2 39 79.5
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 2.6e-09 67.0 37 81.1
Eucgr.J02141 Eucalyptus grandis HOM05D007405 ORTHO05D009256 3.4e-09 66.6 37 81.1
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 3.4e-09 66.6 35 85.7
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 7.6e-09 65.5 35 85.7
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 9.9e-09 65.1 35 82.9
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 9.9e-09 65.1 38 76.3
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 9.9e-09 65.1 36 83.3
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 1.7e-08 64.3 42 78.6
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 2.9e-08 63.5 35 82.9
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 6.4e-08 62.4 36 77.8
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 1.1e-07 61.6 37 75.7
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 2.4e-07 60.5 35 74.3
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 2.4e-07 60.5 35 74.3
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 2.7e-06 57.0 35 71.4
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 3.5e-06 56.6 31 77.4


User provided reference genes

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