Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2357 Fragaria x ananassa HOM05D005629 ORTHO05D008000 1.2e-175 619.8 325 100.0
FAN14G1519 Fragaria x ananassa HOM05D005629 ORTHO05D022663 9.9e-61 238.0 160 81.9
FvH4_6g53420 Fragaria vesca HOM05D005629 ORTHO05D022663 6.0e-50 202.2 134 82.8
FvH4_6g53390 Fragaria vesca HOM05D005629 ORTHO05D022663 7.9e-50 201.8 134 82.8
FvH4_6g53350 Fragaria vesca HOM05D005629 ORTHO05D022663 6.7e-49 198.7 113 91.2
Aqoxy3G01541 Aquilegia oxysepala HOM05D005629 ORTHO05D008000 2.2e-20 104.0 115 52.2
Oeu058781.1 Olea europaea HOM05D005629 ORTHO05D008000 3.8e-20 103.2 104 52.9
Cc07_g00800 Coffea canephora HOM05D005629 ORTHO05D008000 1.1e-19 101.7 117 49.6
Thecc.04G035600 Theobroma cacao HOM05D005629 ORTHO05D008000 2.5e-19 100.5 110 51.8
GSVIVG01033097001 Vitis vinifera HOM05D005629 ORTHO05D008000 3.2e-19 100.1 106 51.9
Gorai.001G271100 Gossypium raimondii HOM05D005629 ORTHO05D008000 4.2e-19 99.8 107 52.3
Sc03g0006560 Simmondsia chinensis HOM05D005629 ORTHO05D008000 4.2e-19 99.8 106 51.9
Actinidia36200 Actinidia chinensis HOM05D005629 ORTHO05D008000 5.5e-19 99.4 106 51.9
Ah.02g120470 Amaranthus hybridus HOM05D005629 ORTHO05D008000 5.5e-19 99.4 102 52.9
Gohir.D07G235300 Gossypium hirsutum HOM05D005629 ORTHO05D008000 5.5e-19 99.4 107 52.3
Prupe.3G305800 Prunus persica HOM05D005629 ORTHO05D008000 5.5e-19 99.4 107 51.4
Thhalv10004520m.g Eutrema salsugineum HOM05D005629 ORTHO05D008000 7.2e-19 99.0 103 53.4
MD09G1011200 Malus domestica HOM05D005629 ORTHO05D008000 7.2e-19 99.0 128 45.3
Solyc03g005000.4 Solanum lycopersicum HOM05D005629 ORTHO05D008000 7.2e-19 99.0 102 52.9
Sopen03g001010 Solanum pennellii HOM05D005629 ORTHO05D008000 7.2e-19 99.0 102 52.9
PGSC0003DMG400013378 Solanum tuberosum HOM05D005629 ORTHO05D008000 7.2e-19 99.0 102 52.9
Aa31LG2G5490 Aethionema arabicum HOM05D005629 ORTHO05D008000 9.4e-19 98.6 117 48.7
COL.COLO4_17207 Corchorus olitorius HOM05D005629 ORTHO05D008000 9.4e-19 98.6 107 51.4
FvH4_6g53470 Fragaria vesca HOM05D005629 ORTHO05D008000 9.4e-19 98.6 118 48.3
Potri.001G330800 Populus trichocarpa HOM05D005629 ORTHO05D008000 9.4e-19 98.6 112 50.9
Dinv33339 Davidia involucrata HOM05D005629 ORTHO05D008000 1.2e-18 98.2 106 50.9
TWI56G1125 Tripterygium wilfordii HOM05D005629 ORTHO05D008000 1.2e-18 98.2 107 53.3
AL5G16240 Arabidopsis lyrata HOM05D005629 ORTHO05D008000 1.6e-18 97.8 103 52.4
Carub.0005s0536 Capsella rubella HOM05D005629 ORTHO05D008000 1.6e-18 97.8 103 52.4
CAN.G1751.5 Capsicum annuum HOM05D005629 ORTHO05D008000 1.6e-18 97.8 102 52.0
Nitab4.5_0005161g0130 Nicotiana tabacum HOM05D005629 ORTHO05D008000 1.6e-18 97.8 102 52.0
Sp2g16240 Schrenkiella parvula HOM05D005629 ORTHO05D008000 1.6e-18 97.8 103 52.4
THA.LOC104825621 Tarenaya hassleriana HOM05D005629 ORTHO05D008000 1.6e-18 97.8 107 50.5
Cfa007230 Carpinus fangiana HOM05D005629 ORTHO05D008000 2.1e-18 97.4 102 52.0
Haze_14872 Corylus avellana HOM05D005629 ORTHO05D008000 2.1e-18 97.4 102 52.0
Eucgr.I01649 Eucalyptus grandis HOM05D005629 ORTHO05D008000 2.1e-18 97.4 102 51.0
Nitab4.5_0000559g0400 Nicotiana tabacum HOM05D005629 ORTHO05D008000 2.1e-18 97.4 102 52.0
QL02p071469 Quercus lobata HOM05D005629 ORTHO05D008000 2.1e-18 97.4 102 52.0
Rhsim10G0006600 Rhododendron simsii HOM05D005629 ORTHO05D008000 2.1e-18 97.4 107 51.4
Sabra16G0211800 Salix brachista HOM05D005629 ORTHO05D008000 2.1e-18 97.4 111 52.3
SalBow4G2288 Salvia bowleyana HOM05D005629 ORTHO05D008000 2.1e-18 97.4 102 52.0
AT3G27110 Arabidopsis thaliana HOM05D005629 ORTHO05D008000 2.7e-18 97.1 121 47.9
EL10Ac6g15359 Beta vulgaris HOM05D005629 ORTHO05D008000 2.7e-18 97.1 101 51.5
FAN09G2642 Fragaria x ananassa HOM05D005629 ORTHO05D008000 2.7e-18 97.1 118 47.5
Gorai.007G073600 Gossypium raimondii HOM05D005629 ORTHO05D008000 2.7e-18 97.1 107 49.5
RcHm_v2.0_Chr2g0175511 Rosa chinensis HOM05D005629 ORTHO05D008000 2.7e-18 97.1 118 48.3
BcaC06g31019 Brassica carinata HOM05D005629 ORTHO05D008000 3.6e-18 96.7 103 51.5
BcaC06g33857 Brassica carinata HOM05D005629 ORTHO05D008000 3.6e-18 96.7 103 51.5
BcaC06g33860 Brassica carinata HOM05D005629 ORTHO05D008000 3.6e-18 96.7 103 50.5
A06p41480 Brassica napus HOM05D005629 ORTHO05D008000 3.6e-18 96.7 103 50.5
C07p36170 Brassica napus HOM05D005629 ORTHO05D008000 3.6e-18 96.7 103 50.5
BolC7t44133H Brassica oleracea HOM05D005629 ORTHO05D008000 3.6e-18 96.7 103 50.5
BraA06t27073Z Brassica rapa HOM05D005629 ORTHO05D008000 3.6e-18 96.7 103 50.5
Gohir.A11G064500 Gossypium hirsutum HOM05D005629 ORTHO05D008000 3.6e-18 96.7 107 49.5
Gohir.D11G068800 Gossypium hirsutum HOM05D005629 ORTHO05D008000 3.6e-18 96.7 107 49.5
Hma1.2p1_1278F.1_g272330 Hydrangea macrophylla HOM05D005629 ORTHO05D008000 3.6e-18 96.7 106 49.1
ECA246G2396 Erigeron canadensis HOM05D005629 ORTHO05D008000 4.7e-18 96.3 111 49.5
Gohir.A07G228100 Gossypium hirsutum HOM05D005629 ORTHO05D008000 4.7e-18 96.3 107 51.4
Lsat_1_v5_gn_9_1240 Lactuca sativa HOM05D005629 ORTHO05D008000 4.7e-18 96.3 108 48.1
Os01g0970700 Oryza sativa ssp. japonica HOM05D005629 ORTHO05D008000 4.7e-18 96.3 103 50.5
CSS0048682 Camellia sinensis var. sinensis HOM05D005629 ORTHO05D004503 6.1e-18 95.9 102 51.0
CiPaw.03G055300 Carya illinoinensis HOM05D005629 ORTHO05D008000 6.1e-18 95.9 102 52.0
DCAR_011309 Daucus carota HOM05D005629 ORTHO05D008000 6.1e-18 95.9 107 49.5
Lju41A52T99 Lonicera japonica HOM05D005629 ORTHO05D008000 6.1e-18 95.9 106 50.0
TAR622G1261 Trochodendron aralioides HOM05D005629 ORTHO05D008000 6.1e-18 95.9 108 50.9
vmacro05954 Vaccinium macrocarpon HOM05D005629 ORTHO05D008000 6.1e-18 95.9 129 45.0
Migut.F00066 Erythranthe guttata HOM05D005629 ORTHO05D008000 1.0e-17 95.1 102 51.0
SGA_v2.0_scaffold253G45198 Striga asiatica HOM05D005629 ORTHO05D008000 1.0e-17 95.1 110 48.2
TPR.G38340 Trifolium pratense HOM05D005629 ORTHO05D008000 1.0e-17 95.1 103 51.5
arahy.Tifrunner.gnm1.ann1.26H0NE Arachis hypogaea HOM05D005629 ORTHO05D008000 1.4e-17 94.7 102 51.0
ClCG05G013480 Citrullus lanatus HOM05D005629 ORTHO05D008000 1.4e-17 94.7 107 49.5
HanXRQChr17g0550111 Helianthus annuus HOM05D005629 ORTHO05D008000 1.4e-17 94.7 114 45.6
PSO017G3506 Papaver somniferum HOM05D005629 ORTHO05D008000 1.4e-17 94.7 107 49.5
unitig_52.g17654 Utricularia gibba HOM05D005629 ORTHO05D008000 1.4e-17 94.7 102 50.0
Cpa.g.sc171.18 Carica papaya HOM05D005629 ORTHO05D008000 1.8e-17 94.4 102 52.0
Lj1g0025061 Lotus japonicus HOM05D005629 ORTHO05D008000 1.8e-17 94.4 107 48.6
Nn4g22342 Nelumbo nucifera HOM05D005629 ORTHO05D008000 1.8e-17 94.4 107 50.5
Psat3g164800 Pisum sativum HOM05D005629 ORTHO05D008000 1.8e-17 94.4 102 50.0
HPP92_024293 Vanilla planifolia HOM05D005629 ORTHO05D008000 1.8e-17 94.4 102 51.0
Zm00001eb127160 Zea mays HOM05D005629 ORTHO05D008000 1.8e-17 94.4 99 51.5
Lalb_Chr14g0363391 Lupinus albus HOM05D005629 ORTHO05D008000 2.3e-17 94.0 101 51.5
PGR142G0641 Punica granatum HOM05D005629 ORTHO05D008000 2.3e-17 94.0 104 50.0
HPP92_024304 Vanilla planifolia HOM05D005629 ORTHO05D008000 2.3e-17 94.0 102 51.0
Actinidia05920 Actinidia chinensis HOM05D005629 ORTHO05D008000 3.0e-17 93.6 102 51.0
Ca_26782_v3 Cicer arietinum L. HOM05D005629 ORTHO05D008000 3.0e-17 93.6 116 45.7
Atru.chr6.2566 Acer truncatum HOM05D005629 ORTHO05D008000 3.9e-17 93.2 102 49.0
Glyma.16G056900 Glycine max HOM05D005629 ORTHO05D008000 3.9e-17 93.2 102 50.0
Mapoly0033s0112 Marchantia polymorpha HOM05D005629 ORTHO05D008000 3.9e-17 93.2 107 48.6
ATR0561G239 Amborella trichopoda HOM05D005629 ORTHO05D008000 5.2e-17 92.8 114 46.5
VMungo1383G2395 Vigna mungo HOM05D005629 ORTHO05D008000 5.2e-17 92.8 99 50.5
CANSAT64G1539 Cannabis sativa HOM05D005629 ORTHO05D008000 6.7e-17 92.4 102 50.0
Migut.K01513 Erythranthe guttata HOM05D005629 ORTHO05D008000 6.7e-17 92.4 102 50.0
Medtr7g033405 Medicago truncatula HOM05D005629 ORTHO05D008000 6.7e-17 92.4 117 46.2
Ciclev10015840m.g Citrus clementina HOM05D005629 ORTHO05D008000 8.8e-17 92.0 102 50.0
Phvul.001G094100 Phaseolus vulgaris HOM05D005629 ORTHO05D008000 8.8e-17 92.0 102 49.0
CsaV3_3G027030 Cucumis sativus L. HOM05D005629 ORTHO05D008000 1.1e-16 91.7 107 46.7
Sed0004120 Sechium edule HOM05D005629 ORTHO05D008000 1.1e-16 91.7 107 47.7
SEGI_10761 Sequoiadendron giganteum HOM05D005629 ORTHO05D008000 1.1e-16 91.7 114 44.7
Migut.H00778 Erythranthe guttata HOM05D005629 ORTHO05D008000 1.5e-16 91.3 102 49.0
Gorai.004G126700 Gossypium raimondii HOM05D005629 ORTHO05D008000 1.5e-16 91.3 107 48.6
AagrBONN_evm.TU.Sc2ySwM_117.2248 Anthoceros agrestis HOM05D005629 ORTHO05D008000 5.7e-16 89.4 107 45.8
Cre14.g620150 Chlamydomonas reinhardtii HOM05D005629 ORTHO05D008000 5.7e-16 89.4 97 51.5
Gohir.D08G117950 Gossypium hirsutum HOM05D005629 ORTHO05D008000 3.7e-15 86.7 107 45.8
MCO03G471 Micromonas commoda HOM05D005629 ORTHO05D008000 1.8e-14 84.3 110 47.3
Hund04337 Selenicereus undatus HOM05D005629 ORTHO05D008000 2.4e-14 84.0 127 40.2
AUR62003511 Chenopodium quinoa HOM05D005629 ORTHO05D008000 7.0e-14 82.4 106 46.2
AUR62017822 Chenopodium quinoa HOM05D005629 ORTHO05D008000 7.0e-14 82.4 106 46.2
Dinv25662 Davidia involucrata HOM05D005629 ORTHO05D000552 7.0e-14 82.4 92 50.0
Peaxi162Scf00700g00023 Petunia axillaris HOM05D005629 ORTHO05D008000 2.6e-13 80.5 132 39.4
PRCOL_00001739 Prasinoderma coloniale HOM05D005629 ORTHO05D008000 1.3e-12 78.2 103 41.7
FvH4_6g53451 Fragaria vesca HOM05D005629 ORTHO05D196308 5.0e-12 76.3 88 53.4
Duzib264G0865 Durio zibethinus HOM05D005629 ORTHO05D008000 1.4e-09 68.2 107 42.1
CDE02G4678 Ceratophyllum demersum HOM05D000139 ORTHO05D000103 2.0e-08 64.3 83 48.2
Migut.G01029 Erythranthe guttata HOM05D005629 ORTHO05D008000 5.7e-08 62.8 78 46.2
Zm00001eb202540 Zea mays HOM05D002249 ORTHO05D002443 5.7e-08 62.8 75 50.7
FAN02G3684 Fragaria x ananassa HOM05D005629 ORTHO05D008000 2.8e-07 60.5 75 46.7


User provided reference genes

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