Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 0.0e+00 1779.6 931 100.0
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 0.0e+00 1731.5 931 97.6
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 0.0e+00 1724.5 931 96.2
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 0.0e+00 1721.4 931 96.1
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 0.0e+00 1652.5 922 93.8
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 0.0e+00 1583.9 931 90.3
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 0.0e+00 1201.4 931 69.5
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 0.0e+00 1170.6 933 67.3
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 6.1e-305 1050.8 879 61.2
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.7e-302 1042.7 876 60.4
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 6.5e-291 1004.2 873 59.5
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 1.0e-288 996.9 916 56.9
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 4.4e-287 991.5 883 60.2
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 4.5e-284 981.5 877 57.1
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 4.6e-276 954.9 947 58.1
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 5.9e-276 954.5 947 57.8
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 3.6e-273 945.3 876 55.1
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 8.0e-273 944.1 880 55.2
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 8.0e-273 944.1 880 55.1
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 3.1e-272 942.2 879 54.6
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 1.3e-270 936.8 878 55.7
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 3.7e-270 935.3 874 54.9
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 3.7e-270 935.3 874 54.2
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 6.4e-270 934.5 888 54.2
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 1.9e-269 932.9 874 54.5
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 9.2e-269 930.6 877 55.3
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 1.0e-267 927.2 877 55.0
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 2.5e-266 922.5 874 54.9
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 7.3e-266 921.0 892 55.3
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 9.5e-266 920.6 939 54.0
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 2.8e-265 919.1 876 54.9
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 3.1e-264 915.6 882 54.1
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 1.7e-262 909.8 890 55.4
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 2.2e-262 909.4 881 53.3
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 4.9e-262 908.3 879 55.2
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 1.9e-261 906.4 849 55.9
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.2e-260 903.7 943 56.0
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 2.3e-259 899.4 883 54.9
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 2.5e-258 896.0 850 55.4
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 1.2e-257 893.6 849 55.5
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 1.6e-257 893.3 881 54.0
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 5.2e-256 888.3 879 53.1
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 3.7e-254 882.1 874 52.4
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 2.4e-253 879.4 849 55.5
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 2.4e-253 879.4 849 54.8
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 2.1e-252 876.3 873 52.5
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 3.5e-252 875.5 759 58.4
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 2.3e-251 872.8 877 52.6
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 3.0e-251 872.5 947 54.2
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 3.9e-251 872.1 907 51.7
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 4.3e-250 868.6 876 52.3
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 6.2e-249 864.8 880 51.8
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 4.0e-248 862.1 934 50.1
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 3.9e-243 845.5 874 52.7
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 1.3e-241 840.5 875 51.9
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.3e-241 840.5 889 50.7
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 1.3e-241 840.5 876 51.8
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 6.2e-241 838.2 884 51.7
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 2.4e-240 836.3 832 52.6
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 3.1e-240 835.9 876 50.9
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 3.4e-239 832.4 908 51.1
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 9.9e-239 830.9 872 51.3
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 8.4e-238 827.8 886 51.2
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 1.6e-236 823.5 770 57.1
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 3.9e-235 818.9 897 50.2
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 1.5e-234 817.0 875 49.6
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 4.5e-231 805.4 851 51.9
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 7.1e-229 798.1 885 50.6
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 8.7e-227 791.2 942 46.2
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 1.1e-226 790.8 865 48.3
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 1.3e-225 787.3 907 47.9
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 2.7e-220 769.6 904 47.2
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 1.3e-219 767.3 881 48.6
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 1.3e-214 750.7 848 50.0
FvH4_6g38050 Fragaria vesca HOM05D003469 ORTHO05D004084 3.5e-212 742.7 806 55.8
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 1.1e-208 731.1 852 45.3
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 1.4e-208 730.7 924 47.0
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 5.3e-208 728.8 871 44.5
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 2.6e-207 726.5 865 44.9
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 5.9e-207 725.3 852 48.2
FvH4_6g38030 Fragaria vesca HOM05D003469 ORTHO05D004084 7.9e-204 714.9 387 93.0
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 8.2e-201 704.9 889 45.2
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 5.3e-200 702.2 876 45.9
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 2.5e-197 693.3 851 47.1
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 4.2e-197 692.6 865 44.5
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 7.2e-197 691.8 882 42.7
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 2.1e-196 690.3 1346 35.1
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 3.7e-193 679.5 860 46.0
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 2.0e-183 647.1 851 44.9
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 3.5e-183 646.4 865 43.6
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 5.9e-183 645.6 854 43.7
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 5.9e-183 645.6 854 43.7
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 5.9e-183 645.6 830 42.8
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 2.5e-181 640.2 855 43.7
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 4.2e-181 639.4 846 44.0
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 5.5e-181 639.0 862 43.3
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 9.4e-181 638.3 854 43.0
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 1.2e-180 637.9 854 42.9
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.2e-180 637.9 673 52.0
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 1.6e-180 637.5 854 43.0
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 8.8e-179 631.7 850 43.1
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 1.4e-176 624.4 850 42.6
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 4.5e-175 619.4 1378 32.8
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 1.1e-173 614.8 757 46.1
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 3.6e-172 609.8 876 39.8
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 1.4e-171 607.8 855 42.5
Ciclev10019721m.g Citrus clementina HOM05D003469 ORTHO05D004084 3.0e-171 606.7 523 59.5
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 1.2e-170 604.7 898 39.5
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 4.4e-170 602.8 705 45.1
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 8.6e-166 588.6 865 40.9
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 6.6e-158 562.4 894 37.8
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 1.6e-156 557.8 877 40.9
Haze_14033 Corylus avellana HOM05D003469 ORTHO05D004084 7.3e-149 532.3 596 50.8
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 5.2e-147 526.2 869 37.1
CDE05G0531 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 1.1e-144 518.5 464 57.5
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 3.6e-140 503.4 409 62.1
TAR633G1289 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.1e-139 501.9 410 62.0
MD17G1141100 Malus domestica HOM05D003469 ORTHO05D004084 2.6e-138 497.3 310 78.7
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.4e-128 464.9 419 56.1
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 1.2e-127 461.8 652 41.9
Ca_19034_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 1.2e-119 435.3 336 65.5
PGSC0003DMG400033134 Solanum tuberosum HOM05D003469 ORTHO05D004084 2.9e-113 414.1 320 63.4
Sp1g15780 Schrenkiella parvula HOM05D003469 ORTHO05D004084 3.0e-102 377.5 446 47.3
C04p00480 Brassica napus HOM05D003469 ORTHO05D004084 7.4e-101 372.9 789 33.1
Potri.013G129500 Populus trichocarpa HOM05D003469 ORTHO05D000003 1.9e-96 358.2 388 50.5
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 7.2e-96 356.3 1086 26.2
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 3.0e-94 350.9 510 42.0
COL.COLO4_25121 Corchorus olitorius HOM05D003469 ORTHO05D004084 3.0e-94 350.9 386 50.0
Cpa.g.sc21.245 Carica papaya HOM05D003469 ORTHO05D004084 9.1e-91 339.3 350 52.3
Oeu019664.1 Olea europaea HOM05D003469 ORTHO05D004084 8.5e-89 332.8 363 49.6
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 7.4e-85 319.7 470 40.0
CDE05G3544 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 1.1e-83 315.8 382 44.8
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.0e-81 309.3 631 34.7
FAN20G2279 Fragaria x ananassa HOM05D003469 ORTHO05D004084 6.5e-81 306.6 502 38.6
SHI03012 Sapria himalayana HOM05D003469 ORTHO05D004084 3.0e-78 297.7 271 56.8
vmacro23125 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 6.1e-71 273.5 416 37.0
HanXRQChr13g0406831 Helianthus annuus HOM05D003469 ORTHO05D004084 2.5e-64 251.5 182 64.8
SHI03015 Sapria himalayana HOM05D003469 ORTHO05D004084 3.6e-63 247.7 240 50.4
Ca_16139_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 8.0e-63 246.5 347 42.4
Medtr4g074690 Medicago truncatula HOM05D003469 ORTHO05D004084 9.8e-61 239.6 283 44.5
Oeu035042.1 Olea europaea HOM05D003469 ORTHO05D004084 2.8e-55 221.5 282 46.1
QL09p054785 Quercus lobata HOM05D003469 ORTHO05D004084 4.0e-54 217.6 173 62.4
SEGI_08666 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 1.2e-53 216.1 177 59.9
Ciclev10020572m.g Citrus clementina HOM05D003469 ORTHO05D004084 3.5e-50 204.5 330 36.7
C04p00500 Brassica napus HOM05D003469 ORTHO05D004084 1.4e-46 192.6 350 35.4
COL.COLO4_25120 Corchorus olitorius HOM05D003469 ORTHO05D004084 1.5e-45 189.1 468 34.6
Cre10.g464950 Chlamydomonas reinhardtii HOM05D003469 ORTHO05D004084 3.4e-45 188.0 361 31.9
Thhalv10002713m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 1.5e-40 172.6 139 61.2
SEGI_05114 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 2.1e-39 168.7 146 58.9
Sabra13G0107500 Salix brachista HOM05D000001 ORTHO05D000003 3.4e-37 161.4 158 55.1
Haze_14034 Corylus avellana HOM05D003469 ORTHO05D004084 8.3e-36 156.8 131 61.1
Psat0s3379g0080 Pisum sativum HOM05D003469 ORTHO05D004084 1.4e-35 156.0 203 46.3
Actinidia02459 Actinidia chinensis HOM05D003469 ORTHO05D004084 7.8e-34 150.2 118 61.9
BcaC02g12573 Brassica carinata HOM05D003469 ORTHO05D004084 2.3e-33 148.7 252 36.1
Ca_16140_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 3.9e-33 147.9 151 49.7
BcaC02g12574 Brassica carinata HOM05D003469 ORTHO05D004084 8.9e-30 136.7 103 64.1
Ca_16137_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 1.2e-29 136.3 241 43.6
Glyma.07G124800 Glycine max HOM05D003469 ORTHO05D004084 4.4e-29 134.4 176 42.6
ECA232G2749 Erigeron canadensis HOM05D001807 ORTHO05D002044 2.2e-28 132.1 88 64.8
Haze_14035 Corylus avellana HOM05D003469 ORTHO05D004084 2.9e-28 131.7 208 38.5
Cpa.g.sc21.244 Carica papaya HOM05D003469 ORTHO05D004084 1.9e-27 129.0 89 68.5
SEGI_26656 Sequoiadendron giganteum HOM05D003469 ORTHO05D000001 4.1e-27 127.9 149 45.0
Cpa.g.sc21.247 Carica papaya HOM05D003469 ORTHO05D004084 3.0e-25 121.7 128 49.2
Aa31LG2G17580 Aethionema arabicum HOM05D003469 ORTHO05D004084 2.5e-24 118.6 85 64.7
FAN20G1461 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.2e-23 116.3 125 50.4
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.1e-23 115.5 79 68.4
MD17G1140900 Malus domestica HOM05D003469 ORTHO05D004084 3.6e-23 114.8 139 62.6
ATR0002G001 Amborella trichopoda HOM05D003469 ORTHO05D004084 3.1e-22 111.7 81 66.7
Psat0s3379g0040 Pisum sativum HOM05D003469 ORTHO05D004084 6.8e-22 110.5 127 43.3
Oeu026515.1 Olea europaea HOM05D003469 ORTHO05D004084 4.1e-19 101.3 92 48.9
Lsat_1_v5_gn_0_35341 Lactuca sativa HOM05D003469 ORTHO05D004084 9.2e-19 100.1 160 37.5
SHI03013 Sapria himalayana HOM05D003469 ORTHO05D004084 1.5e-16 92.8 103 47.6
SEGI_39938 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 8.1e-15 87.0 145 37.2
AagrBONN_evm.TU.Sc2ySwM_362.2853 Anthoceros agrestis HOM05D003469 ORTHO05D004084 7.6e-13 80.5 96 38.5
Ca_19033_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 4.9e-12 77.8 59 57.6
Lsat_1_v5_gn_6_14080 Lactuca sativa HOM05D002718 ORTHO05D004084 7.8e-10 70.5 90 38.9
Sp4g05220 Schrenkiella parvula HOM05D003469 ORTHO05D004084 8.7e-09 67.0 53 58.5
Medtr4g074700 Medicago truncatula HOM05D003469 ORTHO05D004084 1.6e-07 62.8 96 36.5
Pp3c11_22970 Physcomitrium patens HOM05D003301 ORTHO05D003665 1.6e-07 62.8 166 28.9
Lj9A422T78 Lonicera japonica HOM05D003469 ORTHO05D029064 4.8e-07 61.2 82 48.8
Actinidia02458 Actinidia chinensis HOM05D003469 ORTHO05D004084 6.2e-07 60.8 62 53.2
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 1.4e-06 59.7 157 26.8
Psat0s2166g0160 Pisum sativum HOM05D003469 ORTHO05D004084 2.4e-06 58.9 84 44.0
MCO03G148 Micromonas commoda HOM05D003469 ORTHO05D004084 3.1e-06 58.5 73 42.5
BcaB02g08777 Brassica carinata HOM05D003469 ORTHO05D004084 5.3e-06 57.8 158 33.5
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 9.0e-06 57.0 257 23.0


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