Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.3e-88 329.7 168 100.0
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 2.4e-87 325.5 168 98.2
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 1.8e-77 292.7 162 92.6
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 1.8e-66 256.1 166 78.9
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 6.7e-61 237.7 168 73.2
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 6.3e-59 231.1 153 72.5
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 1.5e-57 226.5 135 79.3
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 5.9e-57 224.6 170 67.6
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 1.0e-56 223.8 160 68.8
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 2.9e-56 222.2 168 67.9
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 2.5e-55 219.2 196 61.2
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 3.2e-55 218.8 169 66.3
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 5.5e-55 218.0 107 99.1
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 1.4e-53 213.4 166 66.3
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 3.9e-53 211.8 132 75.8
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 3.9e-53 211.8 134 73.1
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 5.1e-53 211.5 134 73.1
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 6.7e-53 211.1 132 74.2
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 1.5e-52 209.9 135 76.3
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 1.5e-52 209.9 160 66.9
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 2.5e-52 209.1 166 62.0
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 2.5e-52 209.1 137 76.6
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 3.3e-52 208.8 171 65.5
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 5.7e-52 208.0 167 65.9
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 2.2e-51 206.1 167 65.9
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 2.8e-51 205.7 148 68.2
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 3.7e-51 205.3 168 60.7
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 3.7e-51 205.3 141 70.2
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 3.7e-51 205.3 168 62.5
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 4.8e-51 204.9 173 64.7
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 6.3e-51 204.5 126 76.2
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 6.3e-51 204.5 164 62.8
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 8.2e-51 204.1 102 96.1
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 8.2e-51 204.1 102 96.1
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 1.1e-50 203.8 167 64.1
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 1.1e-50 203.8 141 69.5
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 1.4e-50 203.4 149 71.1
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 1.8e-50 203.0 129 73.6
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 2.4e-50 202.6 167 64.1
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 2.4e-50 202.6 167 64.1
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 4.1e-50 201.8 160 61.9
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 6.9e-50 201.1 168 62.5
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 2.0e-49 199.5 138 68.8
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 2.0e-49 199.5 160 61.2
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 7.7e-49 197.6 139 66.9
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 1.7e-48 196.4 168 58.9
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 2.9e-48 195.7 154 64.3
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 5.0e-48 194.9 168 58.9
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 1.1e-47 193.7 168 58.9
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 1.4e-47 193.4 137 70.1
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 1.9e-47 193.0 156 62.2
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 3.2e-47 192.2 162 64.2
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 9.4e-47 190.7 112 79.5
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 2.7e-46 189.1 162 63.6
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 1.4e-45 186.8 165 60.0
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 2.3e-45 186.0 148 65.5
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 2.3e-45 186.0 163 62.0
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 2.3e-45 186.0 165 59.4
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 2.3e-45 186.0 112 75.0
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 3.9e-45 185.3 165 59.4
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 6.7e-45 184.5 155 58.7
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 8.8e-45 184.1 165 58.8
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 1.5e-44 183.3 122 70.5
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 1.5e-44 183.3 170 60.0
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 3.3e-44 182.2 163 58.9
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 3.3e-44 182.2 169 60.4
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 1.7e-43 179.9 159 62.9
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 6.3e-43 177.9 112 77.7
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 1.1e-42 177.2 130 67.7
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 3.1e-42 175.6 125 71.2
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 5.9e-41 171.4 107 76.6
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 1.3e-40 170.2 108 75.0
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 1.1e-39 167.2 155 58.1
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.5e-39 166.8 151 55.0
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 1.5e-39 166.8 167 54.5
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 4.2e-39 165.2 107 72.9
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 1.4e-37 160.2 125 61.6
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 2.3e-37 159.5 170 50.0
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 8.8e-37 157.5 111 71.2
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 1.5e-36 156.8 109 66.1
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 3.3e-36 155.6 100 75.0
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 4.4e-36 155.2 145 54.5
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 4.4e-36 155.2 112 65.2
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 5.7e-36 154.8 105 69.5
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 9.7e-36 154.1 112 64.3
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 6.3e-35 151.4 112 67.0
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 8.2e-35 151.0 114 64.9
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 2.4e-34 149.4 143 57.3
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 2.4e-34 149.4 122 59.0
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 2.4e-34 149.4 122 58.2
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 9.1e-34 147.5 118 61.9
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 1.6e-33 146.7 117 60.7
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 3.8e-32 142.1 161 51.6
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 5.5e-31 138.3 131 58.8
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 3.0e-29 132.5 98 69.4
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 1.5e-28 130.2 97 63.9
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 2.9e-24 115.9 85 62.4
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 2.4e-18 96.3 122 43.4
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 5.7e-12 75.1 81 54.3
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 1.4e-10 70.5 69 55.1
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 7.0e-10 68.2 111 38.7
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 2.3e-08 63.2 106 33.0
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 4.3e-07 58.9 42 61.9
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 4.3e-07 58.9 42 61.9


User provided reference genes

Program Settings