Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2439 Fragaria x ananassa HOM05D002493 ORTHO05D003175 1.8e-157 559.3 294 100.0
FAN03G1106 Fragaria x ananassa HOM05D002493 ORTHO05D003175 2.3e-141 505.8 323 86.4
FAN06G0701 Fragaria x ananassa HOM05D002493 ORTHO05D003175 1.1e-135 486.9 324 84.6
FAN06G0974 Fragaria x ananassa HOM05D002493 ORTHO05D003175 1.4e-135 486.5 324 84.3
FAN10G3393 Fragaria x ananassa HOM05D002493 ORTHO05D003175 1.8e-133 479.6 323 84.5
FAN10G0479 Fragaria x ananassa HOM05D002493 ORTHO05D013605 1.7e-131 473.0 294 89.5
RcHm_v2.0_Chr1g0352691 Rosa chinensis HOM05D002493 ORTHO05D003175 3.0e-101 372.5 323 68.7
Prupe.7G028700 Prunus persica HOM05D002493 ORTHO05D003175 1.1e-18 98.2 443 29.3
QL07p012378 Quercus lobata HOM05D002493 ORTHO05D003175 2.7e-17 93.6 188 42.0
Phvul.007G239100 Phaseolus vulgaris HOM05D002493 ORTHO05D003175 6.7e-16 89.0 182 38.5
Dinv08254 Davidia involucrata HOM05D002493 ORTHO05D003175 8.8e-16 88.6 174 39.7
Hma1.2p1_0254F.1_g103210 Hydrangea macrophylla HOM05D002493 ORTHO05D003175 1.5e-15 87.8 176 39.8
Cfa019980 Carpinus fangiana HOM05D002493 ORTHO05D003175 2.0e-15 87.4 430 29.5
VMungo0720G0912 Vigna mungo HOM05D002493 ORTHO05D003175 5.7e-15 85.9 183 38.8
Sed0023770 Sechium edule HOM05D002493 ORTHO05D003175 2.2e-14 84.0 173 41.6
CiPaw.09G049700 Carya illinoinensis HOM05D002493 ORTHO05D003175 3.7e-14 83.2 180 42.2
TAR636G0768 Trochodendron aralioides HOM05D002493 ORTHO05D003175 8.2e-14 82.0 167 38.9
COL.COLO4_08833 Corchorus olitorius HOM05D002493 ORTHO05D003175 1.4e-13 81.3 183 37.2
Sed0019660 Sechium edule HOM05D002493 ORTHO05D003175 2.4e-13 80.5 430 27.7
Eucgr.A02206 Eucalyptus grandis HOM05D002493 ORTHO05D003175 3.1e-13 80.1 172 40.7
Ca_08373_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 4.1e-13 79.7 163 38.0
MELO3C009729.2 Cucumis melo HOM05D002493 ORTHO05D003175 4.1e-13 79.7 176 38.6
FAN14G2978 Fragaria x ananassa HOM05D002493 ORTHO05D003175 4.1e-13 79.7 167 38.9
CiPaw.10G042500 Carya illinoinensis HOM05D002493 ORTHO05D003175 5.3e-13 79.3 441 28.1
TAR633G1508 Trochodendron aralioides HOM05D002493 ORTHO05D003175 9.1e-13 78.6 164 37.8
Haze_20255 Corylus avellana HOM05D002493 ORTHO05D003175 1.6e-12 77.8 448 28.6
Nn7g36909 Nelumbo nucifera HOM05D002493 ORTHO05D003175 1.6e-12 77.8 163 36.8
Dinv21482 Davidia involucrata HOM05D002493 ORTHO05D003175 2.0e-12 77.4 433 27.3
Thecc.05G121400 Theobroma cacao HOM05D002493 ORTHO05D003175 2.0e-12 77.4 176 36.4
Phvul.001G120200 Phaseolus vulgaris HOM05D002493 ORTHO05D003175 2.6e-12 77.0 179 36.9
FvH4_6g37520 Fragaria vesca HOM05D002493 ORTHO05D003175 3.5e-12 76.6 431 28.1
Nn2g14656 Nelumbo nucifera HOM05D002493 ORTHO05D003175 3.5e-12 76.6 164 36.0
Medtr7g089140 Medicago truncatula HOM05D002493 ORTHO05D003175 5.9e-12 75.9 169 35.5
Glyma.02G157800 Glycine max HOM05D002493 ORTHO05D003175 1.0e-11 75.1 429 27.3
Gohir.A11G306400 Gossypium hirsutum HOM05D002493 ORTHO05D003175 1.3e-11 74.7 175 35.4
Sc13g0000980 Simmondsia chinensis HOM05D002493 ORTHO05D003175 1.7e-11 74.3 394 27.4
CSS0002579 Camellia sinensis var. sinensis HOM05D002493 ORTHO05D003175 2.2e-11 73.9 170 34.7
Lj2C403T6 Lonicera japonica HOM05D002493 ORTHO05D003175 2.2e-11 73.9 189 34.9
MD14G1088300 Malus domestica HOM05D002493 ORTHO05D003175 2.2e-11 73.9 453 26.5
Duzib106G0075 Durio zibethinus HOM05D002493 ORTHO05D003175 2.9e-11 73.6 431 27.4
MBI13_g36916_MAGBIO Magnolia biondii HOM05D002493 ORTHO05D003175 2.9e-11 73.6 161 35.4
CANSAT64G2707 Cannabis sativa HOM05D002493 ORTHO05D003175 3.8e-11 73.2 442 27.6
Gohir.D11G321900 Gossypium hirsutum HOM05D002493 ORTHO05D003175 3.8e-11 73.2 176 35.2
Gorai.007G352000 Gossypium raimondii HOM05D002493 ORTHO05D003175 3.8e-11 73.2 173 35.8
ClCG10G016470 Citrullus lanatus HOM05D002493 ORTHO05D003175 5.0e-11 72.8 430 25.8
FAN09G4564 Fragaria x ananassa HOM05D002493 ORTHO05D003175 5.0e-11 72.8 429 27.0
vmacro08996 Vaccinium macrocarpon HOM05D002493 ORTHO05D003175 1.1e-10 71.6 357 28.6
PGR042G0425 Punica granatum HOM05D002493 ORTHO05D003175 1.5e-10 71.2 434 25.1
Ciclev10011717m.g Citrus clementina HOM05D002493 ORTHO05D003175 1.9e-10 70.9 426 26.5
Lalb_Chr02g0156621 Lupinus albus HOM05D002493 ORTHO05D003175 2.5e-10 70.5 174 36.2
CsaV3_3G039870 Cucumis sativus L. HOM05D002493 ORTHO05D003175 3.2e-10 70.1 430 25.8
Glyma.03G124700 Glycine max HOM05D002493 ORTHO05D003175 3.2e-10 70.1 172 36.0
Nitab4.5_0000062g0160 Nicotiana tabacum HOM05D002493 ORTHO05D003175 4.2e-10 69.7 153 35.3
Nitab4.5_0002869g0070 Nicotiana tabacum HOM05D002493 ORTHO05D003175 4.2e-10 69.7 162 35.8
TPR.G16085 Trifolium pratense HOM05D002493 ORTHO05D003175 4.2e-10 69.7 167 36.5
DCAR_013651 Daucus carota HOM05D002493 ORTHO05D003175 5.5e-10 69.3 173 34.7
FAN02G2197 Fragaria x ananassa HOM05D002493 ORTHO05D003175 5.5e-10 69.3 429 27.5
Lalb_Chr14g0365651 Lupinus albus HOM05D002493 ORTHO05D003175 7.2e-10 68.9 169 36.7
Duzib128G0587 Durio zibethinus HOM05D002493 ORTHO05D003175 9.4e-10 68.6 436 24.8
Lj1g0014460 Lotus japonicus HOM05D002493 ORTHO05D003175 9.4e-10 68.6 156 36.5
Manes.08G061400 Manihot esculenta HOM05D002493 ORTHO05D003175 1.6e-09 67.8 455 26.2
ATR0307G132 Amborella trichopoda HOM05D002493 ORTHO05D003175 2.1e-09 67.4 154 35.1
Actinidia05482 Actinidia chinensis HOM05D002493 ORTHO05D003175 2.7e-09 67.0 172 37.2
Actinidia38179 Actinidia chinensis HOM05D002493 ORTHO05D003175 3.6e-09 66.6 183 35.5
Ca_12358_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 3.6e-09 66.6 98 44.9
Lalb_Chr24g0400441 Lupinus albus HOM05D002493 ORTHO05D003175 3.6e-09 66.6 178 34.3
RcHm_v2.0_Chr2g0150411 Rosa chinensis HOM05D002493 ORTHO05D003175 3.6e-09 66.6 444 27.5
VMungo1383G2045 Vigna mungo HOM05D002493 ORTHO05D003175 3.6e-09 66.6 172 34.3
PGSC0003DMG400028192 Solanum tuberosum HOM05D002493 ORTHO05D003175 6.1e-09 65.9 166 32.5
Glyma.19G127800 Glycine max HOM05D002493 ORTHO05D003175 8.0e-09 65.5 176 32.4
Lalb_Chr22g0357761 Lupinus albus HOM05D002493 ORTHO05D003175 8.0e-09 65.5 167 35.9
Hund19081 Selenicereus undatus HOM05D002493 ORTHO05D003175 8.0e-09 65.5 186 33.9
AT3G10820 Arabidopsis thaliana HOM05D002493 ORTHO05D003175 1.4e-08 64.7 147 38.1
CiPaw.09G049600 Carya illinoinensis HOM05D002493 ORTHO05D003175 1.4e-08 64.7 172 34.9
Nitab4.5_0007477g0010 Nicotiana tabacum HOM05D002493 ORTHO05D003175 1.4e-08 64.7 150 33.3
SalBow1G7393 Salvia bowleyana HOM05D002493 ORTHO05D003175 1.4e-08 64.7 167 36.5
Ca_22467_v3 Cicer arietinum L. HOM05D000349 ORTHO05D003175 1.8e-08 64.3 144 34.7
CARHR208120 Cardamine hirsuta HOM05D002493 ORTHO05D003175 2.3e-08 63.9 179 31.8
Migut.J01632 Erythranthe guttata HOM05D002493 ORTHO05D003175 2.3e-08 63.9 188 30.9
TAR623G0194 Trochodendron aralioides HOM05D002493 ORTHO05D003175 2.3e-08 63.9 167 35.9
AT5G05140 Arabidopsis thaliana HOM05D002493 ORTHO05D003175 3.0e-08 63.5 170 34.1
AUR62030285 Chenopodium quinoa HOM05D002493 ORTHO05D003175 3.0e-08 63.5 160 35.6
Potri.016G033300 Populus trichocarpa HOM05D002493 ORTHO05D003175 3.0e-08 63.5 467 26.6
AL3G22340 Arabidopsis lyrata HOM05D002493 ORTHO05D003175 5.2e-08 62.8 147 38.1
BcaB05g21730 Brassica carinata HOM05D002493 ORTHO05D003175 5.2e-08 62.8 154 33.8
Haze_20253 Corylus avellana HOM05D002493 ORTHO05D003175 5.2e-08 62.8 147 36.7
Rhsim04G0114000 Rhododendron simsii HOM05D002493 ORTHO05D003175 5.2e-08 62.8 178 32.0
Sabra16G0036400 Salix brachista HOM05D002493 ORTHO05D003175 5.2e-08 62.8 184 31.5
Sc19g0008100 Simmondsia chinensis HOM05D002493 ORTHO05D003175 5.2e-08 62.8 177 35.0
TAR375G0992 Trochodendron aralioides HOM05D002493 ORTHO05D003175 5.2e-08 62.8 162 33.3
C09p71560 Brassica napus HOM05D002493 ORTHO05D003175 6.7e-08 62.4 170 35.3
BolC9t59917H Brassica oleracea HOM05D002493 ORTHO05D003175 6.7e-08 62.4 170 35.3
PSO384G4835 Papaver somniferum HOM05D002493 ORTHO05D003175 6.7e-08 62.4 168 33.3
Sp3g09150 Schrenkiella parvula HOM05D002493 ORTHO05D003175 6.7e-08 62.4 172 33.1
Atru.chr1.1386 Acer truncatum HOM05D002493 ORTHO05D003175 8.8e-08 62.0 441 25.9
Cpa.g.sc92.76 Carica papaya HOM05D002493 ORTHO05D003175 8.8e-08 62.0 190 32.6
ECA247G1003 Erigeron canadensis HOM05D002493 ORTHO05D003175 8.8e-08 62.0 401 25.7
Peaxi162Scf01487g00006 Petunia axillaris HOM05D002493 ORTHO05D003175 8.8e-08 62.0 175 30.9
Sopen10g031440 Solanum pennellii HOM05D002493 ORTHO05D003175 8.8e-08 62.0 166 31.9
A10p31030 Brassica napus HOM05D002493 ORTHO05D003175 1.2e-07 61.6 163 39.9
BraA10t45148Z Brassica rapa HOM05D002493 ORTHO05D003175 1.2e-07 61.6 163 39.9
CARHR085400 Cardamine hirsuta HOM05D002493 ORTHO05D003175 1.2e-07 61.6 169 34.3
Peaxi162Scf00003g05036 Petunia axillaris HOM05D002493 ORTHO05D003175 1.2e-07 61.6 160 33.8
Ah.04g150770 Amaranthus hybridus HOM05D002493 ORTHO05D003175 1.5e-07 61.2 65 46.2
arahy.Tifrunner.gnm1.ann1.TK2Q97 Arachis hypogaea HOM05D002493 ORTHO05D003175 1.5e-07 61.2 187 31.6
BcaB04g18612 Brassica carinata HOM05D002493 ORTHO05D003175 1.5e-07 61.2 298 27.2
PSO339G5287 Papaver somniferum HOM05D002493 ORTHO05D003175 1.5e-07 61.2 168 33.3
Ca_17097_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 2.0e-07 60.8 101 41.6
Potri.006G035500 Populus trichocarpa HOM05D002493 ORTHO05D003175 2.0e-07 60.8 476 25.6
Solyc10g080930.2 Solanum lycopersicum HOM05D002493 ORTHO05D003175 2.0e-07 60.8 166 31.9
Manes.09G002800 Manihot esculenta HOM05D002493 ORTHO05D003175 2.6e-07 60.5 451 23.9
TWI53G1609 Tripterygium wilfordii HOM05D002493 ORTHO05D003175 2.6e-07 60.5 184 31.5
ECA234G0705 Erigeron canadensis HOM05D002493 ORTHO05D016993 3.3e-07 60.1 251 29.9
BcaB01g05724 Brassica carinata HOM05D002493 ORTHO05D003175 4.4e-07 59.7 163 32.5
Lsat_1_v5_gn_7_61900 Lactuca sativa HOM05D002493 ORTHO05D003175 4.4e-07 59.7 60 50.0
MBI19_g07500_MAGBIO Magnolia biondii HOM05D002493 ORTHO05D003175 4.4e-07 59.7 162 32.7
SalBow6G2849 Salvia bowleyana HOM05D002493 ORTHO05D003175 4.4e-07 59.7 178 30.9
unitig_21.g20685 Utricularia gibba HOM05D002493 ORTHO05D003175 4.4e-07 59.7 171 34.5
MSTRG.6331 Avicennia marina HOM05D002493 ORTHO05D003175 5.7e-07 59.3 182 31.9
Carub.0006s0407 Capsella rubella HOM05D002493 ORTHO05D003175 5.7e-07 59.3 185 33.0
Eucgr.K01654 Eucalyptus grandis HOM05D002493 ORTHO05D003175 5.7e-07 59.3 147 36.7
arahy.Tifrunner.gnm1.ann1.4137UB Arachis hypogaea HOM05D002493 ORTHO05D003175 7.5e-07 58.9 172 34.9
arahy.Tifrunner.gnm1.ann1.ZA3CQ0 Arachis hypogaea HOM05D002493 ORTHO05D003175 7.5e-07 58.9 172 34.9
CDE08G0887 Ceratophyllum demersum HOM05D002493 ORTHO05D003175 7.5e-07 58.9 166 33.1
Cc00_g10950 Coffea canephora HOM05D002493 ORTHO05D003175 7.5e-07 58.9 194 32.0
DCAR_009127 Daucus carota HOM05D002493 ORTHO05D003175 7.5e-07 58.9 155 29.7
Oeu005221.1 Olea europaea HOM05D002493 ORTHO05D003175 7.5e-07 58.9 170 34.1
HPP92_025127 Vanilla planifolia HOM05D000001 ORTHO05D000003 7.5e-07 58.9 162 33.3
arahy.Tifrunner.gnm1.ann1.SF5CY1 Arachis hypogaea HOM05D002493 ORTHO05D003175 9.7e-07 58.5 188 30.3
Lsat_1_v5_gn_9_32260 Lactuca sativa HOM05D002493 ORTHO05D003175 9.7e-07 58.5 144 33.3
AL6G14970 Arabidopsis lyrata HOM05D002493 ORTHO05D003175 1.3e-06 58.2 181 31.5
FvH4_4g07530 Fragaria vesca HOM05D011619 ORTHO05D013605 1.3e-06 58.2 64 51.6
FAN12G0042 Fragaria x ananassa HOM05D011619 ORTHO05D013605 1.3e-06 58.2 64 51.6
FAN12G1211 Fragaria x ananassa HOM05D011619 ORTHO05D013605 1.3e-06 58.2 64 51.6
FAN22G0183 Fragaria x ananassa HOM05D011619 ORTHO05D013605 1.3e-06 58.2 64 51.6
Oeu027954.1 Olea europaea HOM05D002493 ORTHO05D003175 1.3e-06 58.2 168 31.5
FvH4_4g13680 Fragaria vesca HOM05D011619 ORTHO05D013605 1.7e-06 57.8 68 50.0
FAN12G2052 Fragaria x ananassa HOM05D011619 ORTHO05D013605 1.7e-06 57.8 68 50.0
PSO339G3611 Papaver somniferum HOM05D002493 ORTHO05D003175 1.7e-06 57.8 152 32.2
Peaxi162Scf00003g05132 Petunia axillaris HOM05D002493 ORTHO05D003175 1.7e-06 57.8 166 33.1
Psat3g080480 Pisum sativum HOM05D002493 ORTHO05D003175 2.2e-06 57.4 161 33.5
Ah.13g077170 Amaranthus hybridus HOM05D002493 ORTHO05D003175 2.8e-06 57.0 198 29.8
BraA02t04834Z Brassica rapa HOM05D002493 ORTHO05D003175 3.7e-06 56.6 145 36.6
CAN.G128.85 Capsicum annuum HOM05D002493 ORTHO05D003175 3.7e-06 56.6 410 22.9
Oeu024613.1 Olea europaea HOM05D002493 ORTHO05D003175 3.7e-06 56.6 444 24.5
HanXRQChr13g0406701 Helianthus annuus HOM05D002493 ORTHO05D003175 4.8e-06 56.2 186 32.8
QL07p012326 Quercus lobata HOM05D002493 ORTHO05D003175 4.8e-06 56.2 175 33.1
Sp6g37700 Schrenkiella parvula HOM05D002493 ORTHO05D003175 4.8e-06 56.2 188 33.5
SGA_v2.0_scaffold66G22278 Striga asiatica HOM05D002493 ORTHO05D003175 4.8e-06 56.2 102 42.2
Thhalv10013510m.g Eutrema salsugineum HOM05D002493 ORTHO05D003175 6.3e-06 55.8 184 32.6
Sabra06G0023800 Salix brachista HOM05D002493 ORTHO05D003175 6.3e-06 55.8 469 25.4
SGA_v2.0_scaffold106G30532 Striga asiatica HOM05D002493 ORTHO05D003175 8.2e-06 55.5 66 51.5
THA.LOC104826877 Tarenaya hassleriana HOM05D002493 ORTHO05D003175 8.2e-06 55.5 189 31.2


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