Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.5e-81 306.6 216 100.0
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.5e-81 304.3 216 99.5
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.5e-81 304.3 216 99.5
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 3.3e-76 288.9 216 96.8
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 4.0e-74 282.0 237 75.1
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 2.0e-70 269.6 199 99.5
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 1.5e-68 263.5 216 90.7
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 1.0e-53 214.2 226 73.5
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 5.4e-47 191.8 228 72.4
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 2.4e-42 176.4 219 68.9
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 2.6e-41 172.9 216 70.8
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 5.8e-41 171.8 202 75.2
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 7.6e-41 171.4 223 70.0
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 9.9e-41 171.0 227 64.8
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 2.2e-40 169.9 234 70.5
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 2.9e-40 169.5 224 70.5
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 3.8e-40 169.1 219 69.4
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 3.8e-40 169.1 226 69.5
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 3.8e-40 169.1 226 60.6
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 6.4e-40 168.3 223 69.1
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 8.4e-40 167.9 224 70.1
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 1.1e-39 167.5 218 70.6
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.4e-39 167.2 178 79.2
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 2.4e-39 166.4 217 69.1
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 2.4e-39 166.4 168 82.1
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 3.2e-39 166.0 216 69.4
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 4.2e-39 165.6 232 67.2
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 4.2e-39 165.6 217 71.0
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 4.2e-39 165.6 219 70.8
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 4.2e-39 165.6 227 69.2
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 5.4e-39 165.2 223 69.1
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 5.4e-39 165.2 220 68.2
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 9.3e-39 164.5 229 69.4
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 1.6e-38 163.7 228 64.0
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 2.1e-38 163.3 223 69.5
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 2.1e-38 163.3 185 77.3
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 2.7e-38 162.9 186 73.1
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 3.5e-38 162.5 225 69.3
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 4.6e-38 162.2 217 69.1
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 4.6e-38 162.2 224 69.6
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 7.8e-38 161.4 231 65.4
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 1.0e-37 161.0 223 63.2
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 1.3e-37 160.6 218 69.3
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 1.3e-37 160.6 189 75.7
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 2.3e-37 159.8 179 78.8
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 2.3e-37 159.8 236 66.1
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 2.3e-37 159.8 221 70.1
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 3.0e-37 159.5 215 67.4
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 3.9e-37 159.1 215 67.0
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 6.6e-37 158.3 216 68.1
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 6.6e-37 158.3 233 60.1
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 8.7e-37 157.9 215 67.0
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 1.9e-36 156.8 231 68.0
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 4.3e-36 155.6 234 62.4
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 4.3e-36 155.6 179 78.8
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 7.3e-36 154.8 225 64.9
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 1.6e-35 153.7 226 64.6
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 1.1e-34 151.0 218 66.5
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 1.1e-34 151.0 169 81.7
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 2.4e-34 149.8 220 68.6
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 2.4e-34 149.8 223 66.4
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 4.0e-34 149.1 224 65.6
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 5.3e-34 148.7 190 70.5
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 6.9e-34 148.3 171 78.4
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 1.2e-33 147.5 177 76.3
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 7.6e-33 144.8 211 64.0
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 7.6e-33 144.8 231 62.3
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 9.9e-33 144.4 217 68.2
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 2.9e-32 142.9 224 65.6
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 8.4e-32 141.4 162 79.6
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 2.1e-30 136.7 230 62.2
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 2.1e-30 136.7 214 66.8
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 7.9e-30 134.8 176 70.5
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 2.3e-29 133.3 142 85.9
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 3.9e-29 132.5 161 79.5
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 6.7e-29 131.7 224 62.9
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 8.7e-29 131.3 142 85.9
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 2.5e-28 129.8 225 60.9
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 4.3e-28 129.0 162 68.5
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 5.6e-28 128.6 212 61.3
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.1e-26 124.4 175 70.9
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 5.3e-26 122.1 208 62.0
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 1.5e-25 120.6 201 62.2
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 1.5e-25 120.6 201 62.2
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 1.5e-25 120.6 201 62.2
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 3.4e-25 119.4 164 65.9
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 4.5e-25 119.0 192 64.1
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 3.8e-24 115.9 168 68.5
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 8.4e-24 114.8 171 66.7
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 4.6e-22 109.0 213 56.8
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 3.0e-21 106.3 59 83.1
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 3.9e-21 105.9 224 56.2
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 5.1e-21 105.5 125 90.4
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 5.1e-21 105.5 218 56.0
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 6.7e-21 105.1 174 63.2
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 8.7e-21 104.8 229 45.0
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 1.9e-20 103.6 223 54.3
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 7.4e-20 101.7 53 88.7
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 9.6e-20 101.3 225 56.0
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 8.1e-19 98.2 194 61.3
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 1.4e-18 97.4 108 57.4
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 3.1e-18 96.3 181 62.4
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 5.3e-18 95.5 113 52.2
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 5.3e-18 95.5 113 52.2
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 6.9e-18 95.1 175 61.1
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 1.6e-14 84.0 111 48.6
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 2.7e-14 83.2 218 57.3
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 3.5e-14 82.8 106 50.0
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.0e-13 81.3 64 62.5
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 6.7e-13 78.6 38 92.1
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 9.6e-12 74.7 38 86.8
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 5.3e-10 68.9 58 62.1
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 1.7e-08 63.9 72 51.4
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 1.7e-08 63.9 52 61.5
Cre16.g687300 Chlamydomonas reinhardtii HOM05D006605 ORTHO05D008277 6.5e-08 62.0 59 54.2
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.9e-07 60.5 35 74.3


User provided reference genes

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