Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.1e-142 510.0 254 100.0
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.1e-142 510.0 254 100.0
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 4.9e-140 501.1 254 98.8
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 4.9e-140 501.1 254 98.8
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.1e-139 500.0 254 98.4
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.2e-139 498.4 254 97.6
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.6e-138 496.1 254 97.2
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 8.7e-129 463.8 254 90.9
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 5.3e-102 374.8 251 79.7
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 5.9e-101 371.3 251 79.3
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 6.9e-94 347.8 213 81.7
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 1.1e-91 340.5 258 68.2
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 5.5e-91 338.2 257 68.1
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 7.2e-91 337.8 255 68.6
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 3.6e-90 335.5 258 68.2
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 4.7e-90 335.1 255 66.7
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 6.1e-90 334.7 256 67.2
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 6.1e-90 334.7 250 68.0
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 7.9e-90 334.3 261 67.0
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 7.9e-90 334.3 263 65.8
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 2.3e-89 332.8 263 65.4
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 3.0e-89 332.4 258 67.1
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 1.5e-88 330.1 258 66.7
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 1.5e-88 330.1 251 66.5
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 3.3e-88 328.9 252 67.9
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 9.7e-88 327.4 252 67.5
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 7.0e-86 321.2 258 65.9
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 9.1e-86 320.9 252 66.7
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 1.6e-85 320.1 263 63.5
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 1.7e-84 316.6 256 64.8
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 5.5e-83 311.6 258 65.1
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 7.2e-83 311.2 256 64.5
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 2.7e-82 309.3 256 63.3
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 4.7e-82 308.5 258 64.3
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 1.4e-81 307.0 259 62.2
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 1.4e-81 307.0 259 62.2
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 1.8e-81 306.6 255 61.2
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 1.8e-81 306.6 257 62.6
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 2.3e-81 306.2 252 65.1
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 3.3e-80 302.4 260 61.2
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 4.8e-79 298.5 256 60.2
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.8e-78 296.6 254 61.4
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.8e-78 296.6 254 61.8
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 1.8e-78 296.6 252 58.7
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 7.0e-78 294.7 260 58.5
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 9.1e-78 294.3 260 58.8
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 1.2e-77 293.9 260 60.0
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 4.5e-77 292.0 261 60.9
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 4.5e-77 292.0 249 59.4
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 5.9e-77 291.6 258 60.1
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 1.0e-76 290.8 253 58.5
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 1.3e-76 290.4 253 59.3
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 1.7e-76 290.0 218 69.3
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 2.2e-76 289.7 252 59.9
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 2.9e-76 289.3 253 60.9
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 2.9e-76 289.3 228 64.0
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 1.5e-75 287.0 248 60.1
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 3.2e-75 285.8 257 56.4
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 1.2e-74 283.9 262 58.8
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 2.1e-74 283.1 257 56.8
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 2.7e-74 282.7 252 59.1
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 3.6e-74 282.3 260 57.3
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 6.1e-74 281.6 252 58.3
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 8.0e-74 281.2 259 58.7
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 1.0e-73 280.8 260 56.5
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 1.4e-73 280.4 250 57.6
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 4.0e-73 278.9 259 56.4
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 4.0e-73 278.9 261 56.3
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 6.8e-73 278.1 263 56.7
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 6.8e-73 278.1 263 58.2
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 6.8e-73 278.1 260 56.5
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 1.2e-72 277.3 257 57.6
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 1.5e-72 276.9 260 55.8
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 2.0e-72 276.6 259 56.4
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 5.7e-72 275.0 251 57.0
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 7.5e-72 274.6 271 55.4
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 9.8e-72 274.2 261 55.9
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 6.3e-71 271.6 239 61.9
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 6.3e-71 271.6 254 56.7
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 6.3e-71 271.6 254 56.7
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 6.3e-71 271.6 254 56.7
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 3.1e-70 269.2 258 55.4
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 4.1e-70 268.9 254 56.3
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 1.2e-69 267.3 259 54.4
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 2.0e-69 266.5 311 49.2
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 7.7e-69 264.6 266 56.0
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 3.8e-68 262.3 263 54.0
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 4.2e-67 258.8 224 60.3
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 1.8e-65 253.4 225 60.4
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 8.8e-65 251.1 229 59.4
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 2.8e-63 246.1 219 56.6
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 1.8e-62 243.4 266 49.6
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 4.5e-61 238.8 241 54.4
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 5.9e-61 238.4 249 51.8
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 3.3e-59 232.6 189 68.3
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 2.1e-58 229.9 164 72.6
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 2.8e-58 229.6 249 51.0
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 8.0e-58 228.0 249 50.6
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 3.7e-55 219.2 164 67.7
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 4.9e-55 218.8 261 48.3
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 3.5e-53 212.6 251 49.0
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 2.6e-48 196.4 153 62.7
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 4.6e-45 185.7 155 58.7
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 7.3e-43 178.3 157 53.5
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 7.3e-43 178.3 157 53.5
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 7.3e-43 178.3 157 53.5
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 2.2e-39 166.8 252 39.3
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 2.4e-38 163.3 154 51.9
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 2.5e-35 153.3 124 57.3
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 5.6e-35 152.1 276 35.5
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 5.6e-35 152.1 148 51.4
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 1.2e-34 151.0 117 59.8
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 3.4e-32 142.9 204 41.2
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 4.4e-32 142.5 231 38.5
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 5.4e-30 135.6 109 63.3
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 3.0e-28 129.8 161 48.4
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.4e-22 110.9 167 44.9
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 1.2e-21 107.8 96 59.4
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 3.3e-19 99.8 96 56.2
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 9.6e-19 98.2 96 52.1
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 4.8e-18 95.9 94 51.1
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 7.6e-16 88.6 78 64.1
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 1.1e-14 84.7 76 59.2
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 4.2e-14 82.8 48 83.3
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 3.5e-13 79.7 76 57.9
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 1.8e-12 77.4 156 34.6
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 3.0e-12 76.6 67 56.7
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 6.7e-12 75.5 157 33.8
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 3.3e-11 73.2 97 44.3
MD01G1114600 Malus domestica HOM05D005673 ORTHO05D007081 1.6e-10 70.9 55 78.2
Oeu008279.1 Olea europaea HOM05D005673 ORTHO05D007081 7.1e-06 55.5 41 53.7


User provided reference genes

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