Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G1435 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.2e-48 196.8 158 100.0
FvH4_7g32120 Fragaria vesca HOM05D005832 ORTHO05D007117 4.7e-48 194.9 157 100.0
FAN06G2446 Fragaria x ananassa HOM05D005832 ORTHO05D007117 4.7e-48 194.9 157 100.0
FAN03G0720 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.4e-47 193.4 157 98.1
FAN10G0265 Fragaria x ananassa HOM05D005832 ORTHO05D007117 8.8e-47 190.7 157 98.7
FAN10G0314 Fragaria x ananassa HOM05D005832 ORTHO05D007117 8.8e-47 190.7 157 98.7
RcHm_v2.0_Chr1g0381721 Rosa chinensis HOM05D005832 ORTHO05D007117 1.2e-46 190.3 157 97.5
MD07G1294700 Malus domestica HOM05D005832 ORTHO05D007117 2.4e-44 182.6 157 94.9
Prupe.2G314300 Prunus persica HOM05D005832 ORTHO05D007117 3.1e-44 182.2 157 94.3
Haze_00239 Corylus avellana HOM05D005832 ORTHO05D007117 3.5e-43 178.7 157 93.6
Haze_00242 Corylus avellana HOM05D005832 ORTHO05D007117 3.5e-43 178.7 157 93.6
Peaxi162Scf00740g00233 Petunia axillaris HOM05D005832 ORTHO05D007117 4.5e-43 178.3 157 93.6
Actinidia06134 Actinidia chinensis HOM05D005832 ORTHO05D007117 7.7e-43 177.6 157 93.0
Cfa016207 Carpinus fangiana HOM05D005832 ORTHO05D007117 1.3e-42 176.8 157 93.0
Atru.chr12.2262 Acer truncatum HOM05D005832 ORTHO05D007117 1.7e-42 176.4 157 93.0
TAR375G0053 Trochodendron aralioides HOM05D005832 ORTHO05D007117 3.8e-42 175.3 157 93.0
Dinv29254 Davidia involucrata HOM05D005832 ORTHO05D007117 6.5e-42 174.5 157 90.4
Medtr3g491890 Medicago truncatula HOM05D005832 ORTHO05D007117 6.5e-42 174.5 157 91.7
PGSC0003DMG400018522 Solanum tuberosum HOM05D005832 ORTHO05D007117 1.5e-41 173.3 157 91.7
CiPaw.06G044600 Carya illinoinensis HOM05D005832 ORTHO05D007117 1.9e-41 172.9 157 91.1
MD01G1223900 Malus domestica HOM05D005832 ORTHO05D007117 2.5e-41 172.6 154 92.2
GSVIVG01038586001 Vitis vinifera HOM05D005832 ORTHO05D007117 3.2e-41 172.2 157 91.1
Potri.012G018100 Populus trichocarpa HOM05D005832 ORTHO05D007117 5.5e-41 171.4 157 91.1
Solyc03g082890.3 Solanum lycopersicum HOM05D005832 ORTHO05D007117 7.2e-41 171.0 157 91.1
Sopen03g022710 Solanum pennellii HOM05D005832 ORTHO05D007117 7.2e-41 171.0 157 91.1
Oeu010700.1 Olea europaea HOM05D005832 ORTHO05D007117 9.5e-41 170.6 157 90.4
ATR0680G157 Amborella trichopoda HOM05D005832 ORTHO05D007117 1.2e-40 170.2 156 87.8
CDE09G0779 Ceratophyllum demersum HOM05D005832 ORTHO05D007117 1.2e-40 170.2 157 90.4
Sabra12G0014400 Salix brachista HOM05D005832 ORTHO05D007117 1.2e-40 170.2 157 90.4
MBI18_g01156_MAGBIO Magnolia biondii HOM05D005832 ORTHO05D007117 1.6e-40 169.9 157 89.8
TPR.G33655 Trifolium pratense HOM05D005832 ORTHO05D007117 1.6e-40 169.9 157 89.8
AUR62035562 Chenopodium quinoa HOM05D005832 ORTHO05D007117 2.1e-40 169.5 157 90.4
Psat5g075600 Pisum sativum HOM05D005832 ORTHO05D007117 2.1e-40 169.5 157 89.8
Ciclev10021983m.g Citrus clementina HOM05D005832 ORTHO05D007117 3.6e-40 168.7 157 89.8
CAN.G481.39 Capsicum annuum HOM05D005832 ORTHO05D007117 4.7e-40 168.3 157 89.8
AUR62006065 Chenopodium quinoa HOM05D005832 ORTHO05D007117 4.7e-40 168.3 157 89.8
Manes.01G039700 Manihot esculenta HOM05D005832 ORTHO05D007117 4.7e-40 168.3 157 89.2
COL.COLO4_16805 Corchorus olitorius HOM05D005832 ORTHO05D007117 8.0e-40 167.5 157 89.8
Nn3g18931 Nelumbo nucifera HOM05D005832 ORTHO05D007117 8.0e-40 167.5 157 89.8
PGR142G2159 Punica granatum HOM05D005832 ORTHO05D007117 8.0e-40 167.5 157 89.8
Ca_16726_v3 Cicer arietinum L. HOM05D005832 ORTHO05D007117 1.0e-39 167.2 157 89.2
SalBow2G0471 Salvia bowleyana HOM05D005832 ORTHO05D007117 1.0e-39 167.2 157 90.4
arahy.Tifrunner.gnm1.ann1.082NQD Arachis hypogaea HOM05D005832 ORTHO05D007117 1.4e-39 166.8 156 89.1
arahy.Tifrunner.gnm1.ann1.26JPZN Arachis hypogaea HOM05D005832 ORTHO05D007117 1.4e-39 166.8 156 89.1
MSTRG.8527 Avicennia marina HOM05D005832 ORTHO05D007117 1.4e-39 166.8 157 89.2
Cc02_g01260 Coffea canephora HOM05D005832 ORTHO05D007117 1.8e-39 166.4 158 87.3
QL09p007826 Quercus lobata HOM05D005832 ORTHO05D007117 1.8e-39 166.4 156 89.7
unitig_578.g16672 Utricularia gibba HOM05D005832 ORTHO05D007117 1.8e-39 166.4 156 88.5
SEGI_24850 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 2.3e-39 166.0 156 89.1
SGA_v2.0_scaffold125G33711 Striga asiatica HOM05D005832 ORTHO05D007117 2.3e-39 166.0 157 87.3
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.0e-39 165.6 157 88.5
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 3.0e-39 165.6 157 88.5
Thecc.03G202400 Theobroma cacao HOM05D005832 ORTHO05D007117 3.0e-39 165.6 157 87.9
Gohir.A09G185500 Gossypium hirsutum HOM05D005832 ORTHO05D007117 4.0e-39 165.2 157 88.5
Nitab4.5_0007100g0060 Nicotiana tabacum HOM05D005832 ORTHO05D007117 4.0e-39 165.2 157 90.4
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 6.8e-39 164.5 154 90.3
ClCG05G009090 Citrullus lanatus HOM05D005832 ORTHO05D007117 8.8e-39 164.1 157 89.2
Eucgr.K00402 Eucalyptus grandis HOM05D005832 ORTHO05D007117 8.8e-39 164.1 168 69.6
Lj1g0002080 Lotus japonicus HOM05D005832 ORTHO05D007117 8.8e-39 164.1 157 87.9
TWI39G1154 Tripterygium wilfordii HOM05D005832 ORTHO05D007117 8.8e-39 164.1 157 87.9
Zm00001eb220820 Zea mays HOM05D005832 ORTHO05D007117 8.8e-39 164.1 157 87.9
MELO3C019377.2 Cucumis melo HOM05D005832 ORTHO05D007117 1.5e-38 163.3 157 89.2
Lalb_Chr08g0240071 Lupinus albus HOM05D005832 ORTHO05D007117 1.5e-38 163.3 157 88.5
CsaV3_3G019700 Cucumis sativus L. HOM05D005832 ORTHO05D007117 2.0e-38 162.9 157 89.2
Phvul.009G050400 Phaseolus vulgaris HOM05D005832 ORTHO05D007117 2.0e-38 162.9 157 86.6
Sed0026931 Sechium edule HOM05D005832 ORTHO05D007117 2.0e-38 162.9 157 87.9
HPP92_013004 Vanilla planifolia HOM05D005832 ORTHO05D007117 2.0e-38 162.9 157 87.3
Sp6g15630 Schrenkiella parvula HOM05D005832 ORTHO05D007117 2.6e-38 162.5 157 88.5
Aa31LG3G9660 Aethionema arabicum HOM05D005832 ORTHO05D007117 3.4e-38 162.2 157 87.9
PSO170G4678 Papaver somniferum HOM05D005832 ORTHO05D007117 3.4e-38 162.2 157 89.8
BcaC04g20449 Brassica carinata HOM05D005832 ORTHO05D007117 4.4e-38 161.8 157 88.5
A10p10930 Brassica napus HOM05D005832 ORTHO05D007117 4.4e-38 161.8 157 88.5
C09p43330 Brassica napus HOM05D005832 ORTHO05D007117 4.4e-38 161.8 157 88.5
BolC9t57215H Brassica oleracea HOM05D005832 ORTHO05D007117 4.4e-38 161.8 157 88.5
BraA10t43184Z Brassica rapa HOM05D005832 ORTHO05D007117 4.4e-38 161.8 157 88.5
Os10g0502000 Oryza sativa ssp. japonica HOM05D005832 ORTHO05D007117 4.4e-38 161.8 157 86.0
PSO063G3297 Papaver somniferum HOM05D005832 ORTHO05D007117 4.4e-38 161.8 157 89.8
VMungo1309G1177 Vigna mungo HOM05D005832 ORTHO05D007117 4.4e-38 161.8 157 87.3
ECA233G1427 Erigeron canadensis HOM05D005832 ORTHO05D007117 9.8e-38 160.6 156 87.8
Thhalv10014535m.g Eutrema salsugineum HOM05D005832 ORTHO05D007117 9.8e-38 160.6 157 87.9
Gorai.013G219100 Gossypium raimondii HOM05D005832 ORTHO05D007117 9.8e-38 160.6 157 54.8
HanXRQChr08g0225151 Helianthus annuus HOM05D005832 ORTHO05D007117 1.7e-37 159.8 156 87.8
CARHR266630 Cardamine hirsuta HOM05D005832 ORTHO05D007117 2.8e-37 159.1 157 87.3
Glyma.04G233500 Glycine max HOM05D005832 ORTHO05D007117 2.8e-37 159.1 157 87.3
Glyma.06G131300 Glycine max HOM05D005832 ORTHO05D007117 3.7e-37 158.7 157 87.9
DCAR_020339 Daucus carota HOM05D005832 ORTHO05D007117 4.9e-37 158.3 155 87.7
Duzib084G1042 Durio zibethinus HOM05D005832 ORTHO05D007117 4.9e-37 158.3 157 87.3
Gorai.007G219400 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.9e-37 158.3 157 84.7
Hma1.2p1_0591F.1_g185170 Hydrangea macrophylla HOM05D005832 ORTHO05D007117 4.9e-37 158.3 157 87.9
BcaB08g35713 Brassica carinata HOM05D005832 ORTHO05D007117 6.3e-37 157.9 157 87.3
Rhsim09G0206900 Rhododendron simsii HOM05D005832 ORTHO05D007117 2.4e-36 156.0 158 85.4
Oeu055193.1 Olea europaea HOM05D005832 ORTHO05D007117 3.1e-36 155.6 181 60.8
Sc25g0000950 Simmondsia chinensis HOM05D005832 ORTHO05D007117 3.1e-36 155.6 157 85.4
Carub.0008s1366 Capsella rubella HOM05D005832 ORTHO05D007117 4.1e-36 155.2 157 86.6
Gorai.004G199200 Gossypium raimondii HOM05D005832 ORTHO05D007117 7.0e-36 154.5 157 66.2
vmacro10134 Vaccinium macrocarpon HOM05D005832 ORTHO05D007117 9.2e-36 154.1 158 85.4
AL8G28210 Arabidopsis lyrata HOM05D005832 ORTHO05D007117 1.2e-35 153.7 157 86.0
AT5G53490 Arabidopsis thaliana HOM05D005832 ORTHO05D007117 1.2e-35 153.7 157 86.0
Aqoxy6G02259 Aquilegia oxysepala HOM05D005832 ORTHO05D007117 1.6e-35 153.3 157 82.8
CANSAT21G0464 Cannabis sativa HOM05D005832 ORTHO05D007117 3.5e-35 152.1 157 85.4
Gorai.008G174000 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.0e-34 150.6 157 84.1
Pp3c23_22190 Physcomitrium patens HOM05D005832 ORTHO05D007117 1.0e-34 150.6 157 80.9
Lj3A899T66 Lonicera japonica HOM05D005832 ORTHO05D007117 1.7e-34 149.8 78 93.6
Gorai.006G202400 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.3e-34 149.4 157 84.7
CSS0000669 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 1.9e-33 146.4 78 89.7
CSS0046458 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 1.9e-33 146.4 78 89.7
Migut.F01014 Erythranthe guttata HOM05D005832 ORTHO05D007117 5.6e-33 144.8 78 87.2
Gohir.D07G112932 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.1e-32 142.9 157 51.0
SMO111G0094 Selaginella moellendorffii HOM05D005832 ORTHO05D007117 4.7e-32 141.7 156 80.1
Gohir.D09G180400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.3e-31 139.4 143 87.4
EL10Ac3g05248 Beta vulgaris HOM05D005832 ORTHO05D007117 5.2e-31 138.3 157 65.0
Gohir.A05G409400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.6e-30 136.0 78 82.1
Gohir.A10G001400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.6e-30 136.0 78 82.1
Gohir.D01G203700 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.6e-30 136.0 78 82.1
Gohir.D03G118200 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.6e-30 136.0 78 82.1
AagrBONN_evm.TU.Sc2ySwM_228.2510 Anthoceros agrestis HOM05D005832 ORTHO05D007117 7.5e-30 134.4 79 78.5
Gohir.D02G154600 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.7e-29 133.3 78 79.5
Gorai.004G257600 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.2e-29 132.9 77 81.8
Gohir.D11G247000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.7e-29 132.1 78 79.5
THA.LOC104799961 Tarenaya hassleriana HOM05D005832 ORTHO05D007117 3.7e-29 132.1 157 78.3
Gohir.A13G227280 Gossypium hirsutum HOM05D005832 ORTHO05D007117 4.9e-29 131.7 78 79.5
CBR_g40818 Chara braunii HOM05D005832 ORTHO05D007117 1.1e-28 130.6 77 79.2
Mapoly0014s0126 Marchantia polymorpha HOM05D005832 ORTHO05D007117 3.2e-28 129.0 157 70.7
Gohir.A11G163501 Gossypium hirsutum HOM05D005832 ORTHO05D007117 4.1e-28 128.6 157 51.6
Ah.13g070460 Amaranthus hybridus HOM05D005832 ORTHO05D007117 7.0e-28 127.9 71 81.7
Gohir.D12G161000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.6e-24 116.7 157 49.7
SEGI_05976 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 9.2e-20 100.9 65 72.3
Duzib205G0233 Durio zibethinus HOM05D005832 ORTHO05D007117 3.3e-17 92.4 157 70.7
Actinidia18663 Actinidia chinensis HOM05D005832 ORTHO05D007117 4.9e-13 78.6 110 83.6
Cre09.g404000 Chlamydomonas reinhardtii HOM05D005832 ORTHO05D007117 8.6e-10 67.8 157 40.8


User provided reference genes

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