Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.5e-192 675.2 339 100.0
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 8.2e-191 670.2 339 99.4
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 8.2e-191 670.2 339 99.4
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 8.2e-191 670.2 339 99.4
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 2.9e-188 661.8 339 97.6
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 7.2e-179 630.6 339 93.2
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 1.3e-177 626.3 339 92.3
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 1.3e-177 626.3 338 92.0
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 3.9e-177 624.8 339 91.4
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 8.7e-177 623.6 334 92.2
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 8.7e-177 623.6 339 91.4
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 8.7e-177 623.6 338 92.6
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 2.5e-176 622.1 339 90.6
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 3.3e-176 621.7 338 91.4
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 3.3e-176 621.7 338 90.8
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 5.7e-176 620.9 334 91.6
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 9.7e-176 620.2 339 91.4
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 1.7e-175 619.4 339 90.9
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 1.7e-175 619.4 339 90.9
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 1.7e-175 619.4 339 91.4
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 2.8e-175 618.6 340 90.9
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 6.3e-175 617.5 339 90.6
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 8.2e-175 617.1 337 90.5
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 8.2e-175 617.1 334 90.1
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 1.1e-174 616.7 334 90.4
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 1.1e-174 616.7 334 90.4
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 1.4e-174 616.3 339 90.3
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 2.4e-174 615.5 338 89.9
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 6.9e-174 614.0 338 90.2
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 6.9e-174 614.0 334 91.0
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 6.9e-174 614.0 339 90.0
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 9.1e-174 613.6 339 88.8
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.5e-173 612.8 334 91.0
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 1.5e-173 612.8 339 88.5
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 1.5e-173 612.8 338 89.9
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 1.5e-173 612.8 339 88.5
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 2.0e-173 612.5 336 90.8
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 2.0e-173 612.5 337 91.1
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 2.0e-173 612.5 339 89.7
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 2.6e-173 612.1 339 89.1
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 3.4e-173 611.7 339 87.9
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 3.4e-173 611.7 338 89.3
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 4.5e-173 611.3 339 87.0
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 5.9e-173 610.9 333 89.5
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 5.9e-173 610.9 339 89.4
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 1.0e-172 610.1 339 88.8
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 1.3e-172 609.8 341 89.7
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 1.3e-172 609.8 339 90.0
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 1.7e-172 609.4 340 88.5
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 2.2e-172 609.0 333 90.4
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 2.9e-172 608.6 339 89.7
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 2.9e-172 608.6 334 90.4
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 5.0e-172 607.8 328 90.5
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 6.5e-172 607.4 340 90.0
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 6.5e-172 607.4 339 89.7
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 8.5e-172 607.1 334 91.3
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 1.4e-171 606.3 340 90.0
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 1.4e-171 606.3 336 89.3
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 1.9e-171 605.9 342 90.1
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 1.9e-171 605.9 339 88.5
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 3.2e-171 605.1 338 89.3
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 3.2e-171 605.1 340 89.7
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 4.2e-171 604.7 328 90.9
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 4.2e-171 604.7 339 88.5
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 5.5e-171 604.4 333 89.5
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 7.2e-171 604.0 337 89.3
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 9.4e-171 603.6 339 85.8
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 1.6e-170 602.8 339 88.2
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 1.6e-170 602.8 362 83.7
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 2.1e-170 602.4 339 89.1
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 6.1e-170 600.9 339 89.4
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 7.9e-170 600.5 376 81.6
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 1.0e-169 600.1 339 89.4
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 1.4e-169 599.7 342 88.6
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 2.3e-169 599.0 339 88.5
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 3.0e-169 598.6 342 88.6
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 3.0e-169 598.6 342 88.3
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 5.1e-169 597.8 340 89.1
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 1.1e-168 596.7 339 89.7
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 2.0e-168 595.9 339 87.3
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 2.0e-168 595.9 339 87.0
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 3.3e-168 595.1 332 89.2
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 1.3e-167 593.2 327 88.4
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.7e-167 592.8 339 87.3
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 2.2e-167 592.4 334 87.7
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 1.1e-166 590.1 333 86.8
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.4e-166 589.7 339 86.1
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.4e-166 589.7 339 86.1
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 4.1e-166 588.2 339 86.4
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 6.9e-166 587.4 339 87.3
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 9.1e-166 587.0 339 87.0
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 2.6e-165 585.5 333 86.8
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 4.5e-165 584.7 332 86.4
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 1.0e-164 583.6 332 86.1
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 1.3e-164 583.2 367 81.2
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 1.7e-164 582.8 328 86.9
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 2.2e-164 582.4 339 86.4
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 2.5e-163 578.9 315 91.1
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 6.1e-162 574.3 394 76.1
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 2.0e-160 569.3 328 85.7
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 1.7e-159 566.2 342 82.2
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 3.1e-158 562.0 339 81.1
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 7.0e-158 560.8 346 82.9
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 5.9e-157 557.8 342 80.4
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 5.9e-157 557.8 339 80.2
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 1.0e-156 557.0 339 81.1
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 5.2e-153 544.7 339 77.9
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 3.3e-152 542.0 339 78.5
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 2.2e-151 539.3 339 78.2
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 1.4e-150 536.6 339 76.7
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 7.0e-150 534.3 339 81.1
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 4.5e-149 531.6 336 78.0
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 3.2e-147 525.4 343 75.8
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 1.2e-146 523.5 338 75.4
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 5.0e-140 501.5 312 77.2
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 2.2e-135 486.1 336 71.4
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 2.7e-133 479.2 310 74.8
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 2.4e-126 456.1 339 72.6
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 4.6e-125 451.8 338 68.6
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 6.0e-125 451.4 321 67.9
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 3.3e-123 445.7 252 87.3
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 6.4e-119 431.4 251 86.5
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 1.1e-118 430.6 219 98.2
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 1.0e-116 424.1 239 87.0
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 1.1e-115 420.6 330 67.0
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 4.3e-115 418.7 249 82.3
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 5.2e-113 411.8 245 84.1
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 2.3e-108 396.4 231 85.7
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 6.2e-106 388.3 215 88.4
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 9.9e-104 380.9 208 90.4
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 7.6e-96 354.8 326 56.7
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 7.1e-94 348.2 193 88.1
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 9.3e-94 347.8 192 89.1
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 1.7e-92 343.6 193 85.0
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 2.4e-86 323.2 323 54.8
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 4.9e-79 298.9 242 62.4
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 6.7e-76 288.5 171 84.2
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 1.3e-74 284.3 195 68.2
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 1.4e-73 280.8 145 96.6
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 1.0e-63 248.1 135 90.4
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 1.0e-55 221.5 148 74.3
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 1.5e-51 207.6 155 65.2
CDE02G4314 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 1.9e-46 190.7 148 69.6
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea HOM05D004324 ORTHO05D004840 2.0e-40 170.6 87 94.3
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 4.2e-38 162.9 102 78.4
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 4.8e-34 149.4 96 77.1
Duzib177G0443 Durio zibethinus HOM05D004324 ORTHO05D004840 2.4e-33 147.1 101 76.2
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 1.6e-32 144.4 74 94.6
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 4.5e-32 142.9 104 68.3
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 2.9e-31 140.2 87 79.3
CAN.G23.23 Capsicum annuum HOM05D004324 ORTHO05D004840 9.4e-30 135.2 78 80.8
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 2.6e-27 127.1 89 71.9
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 3.3e-22 110.2 127 52.8
Prupe.7G087800 Prunus persica HOM05D004324 ORTHO05D004840 1.2e-21 108.2 124 55.6
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.6e-21 107.8 108 55.6
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.8e-20 104.4 77 68.8
Cfa025533 Carpinus fangiana HOM05D000146 ORTHO05D004840 1.3e-18 98.2 326 27.3
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 3.7e-18 96.7 283 28.6
Pp3s30_709 Physcomitrium patens HOM05D004324 ORTHO05D004840 4.9e-18 96.3 234 30.3
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 1.1e-17 95.1 73 64.4
Ca_28979_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 1.8e-17 94.4 281 29.5
Cfa023222 Carpinus fangiana HOM05D004324 ORTHO05D004840 1.9e-14 84.3 267 29.6
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 2.0e-11 74.3 103 46.6
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 4.9e-10 69.7 52 71.2
Cfa024978 Carpinus fangiana HOM05D004324 ORTHO05D034102 1.1e-09 68.6 191 28.8
Aa31sc49G50 Aethionema arabicum HOM05D004324 ORTHO05D004840 1.9e-09 67.8 45 77.8
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 2.0e-08 64.3 42 73.8


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