Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L03323 Eucalyptus grandis HOM05D000181 ORTHO05D007950 2.0e-70 268.9 127 100.0
Eucgr.H04217 Eucalyptus grandis HOM05D000181 ORTHO05D007950 2.7e-54 215.3 128 78.9
Cfa006380 Carpinus fangiana HOM05D000181 ORTHO05D007950 1.2e-46 189.9 126 69.8
RcHm_v2.0_Chr3g0449311 Rosa chinensis HOM05D000181 ORTHO05D007950 1.6e-46 189.5 126 69.8
PGR004G1120 Punica granatum HOM05D000181 ORTHO05D007950 6.0e-46 187.6 126 68.3
QL03p029504 Quercus lobata HOM05D000181 ORTHO05D007950 6.0e-46 187.6 126 69.8
FAN02G1064 Fragaria x ananassa HOM05D000181 ORTHO05D007950 7.8e-46 187.2 126 69.0
FvH4_6g01550 Fragaria vesca HOM05D000181 ORTHO05D007950 1.3e-45 186.4 126 69.0
FAN09G4093 Fragaria x ananassa HOM05D000181 ORTHO05D007950 1.3e-45 186.4 126 69.0
FAN14G0398 Fragaria x ananassa HOM05D000181 ORTHO05D007950 1.3e-45 186.4 126 69.0
FAN14G4262 Fragaria x ananassa HOM05D000181 ORTHO05D007950 1.3e-45 186.4 126 69.0
TWI34G0190 Tripterygium wilfordii HOM05D000181 ORTHO05D007950 2.3e-45 185.7 126 65.9
Prupe.6G352000 Prunus persica HOM05D000181 ORTHO05D007950 3.0e-45 185.3 126 66.7
Hma1.2p1_1351F.1_g277410 Hydrangea macrophylla HOM05D000181 ORTHO05D007950 2.5e-44 182.2 128 63.3
Haze_04399 Corylus avellana HOM05D000181 ORTHO05D007950 3.3e-44 181.8 126 67.5
MD04G1232400 Malus domestica HOM05D000181 ORTHO05D007950 4.3e-44 181.4 126 67.5
TAR362G0160 Trochodendron aralioides HOM05D000181 ORTHO05D007950 4.3e-44 181.4 126 64.3
CSS0011745 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007950 1.6e-43 179.5 124 66.1
PSO210G0470 Papaver somniferum HOM05D000181 ORTHO05D007950 1.6e-43 179.5 129 62.0
Solyc02g032960.2 Solanum lycopersicum HOM05D000181 ORTHO05D007950 2.8e-43 178.7 130 61.5
Gohir.A11G245300 Gossypium hirsutum HOM05D000181 ORTHO05D007950 4.8e-43 177.9 126 63.5
PSO761G0660 Papaver somniferum HOM05D000181 ORTHO05D007950 1.1e-42 176.8 129 61.2
Sopen02g011360 Solanum pennellii HOM05D000181 ORTHO05D007950 1.4e-42 176.4 126 61.9
Thecc.05G267400 Theobroma cacao HOM05D000181 ORTHO05D007950 1.4e-42 176.4 126 62.7
Gohir.D11G255200 Gossypium hirsutum HOM05D000181 ORTHO05D007950 1.8e-42 176.0 126 62.7
Gorai.007G273800 Gossypium raimondii HOM05D000181 ORTHO05D007950 1.8e-42 176.0 126 62.7
Peaxi162Scf00363g00727 Petunia axillaris HOM05D000181 ORTHO05D007950 1.8e-42 176.0 126 62.7
Dinv11715 Davidia involucrata HOM05D000181 ORTHO05D007950 2.4e-42 175.6 126 62.7
Potri.013G048700 Populus trichocarpa HOM05D000181 ORTHO05D007950 3.1e-42 175.3 126 63.5
CANSAT54G2074 Cannabis sativa HOM05D000181 ORTHO05D007950 4.0e-42 174.9 126 61.9
Sabra13G0044800 Salix brachista HOM05D000181 ORTHO05D007950 4.0e-42 174.9 126 64.3
CiPaw.07G071100 Carya illinoinensis HOM05D000181 ORTHO05D007950 5.3e-42 174.5 128 63.3
Actinidia04309 Actinidia chinensis HOM05D000181 ORTHO05D007950 6.9e-42 174.1 126 62.7
MBI19_g37398_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D007950 6.9e-42 174.1 126 61.1
Atru.chr2.1070 Acer truncatum HOM05D000181 ORTHO05D007950 1.5e-41 172.9 126 65.1
Nitab4.5_0002192g0040 Nicotiana tabacum HOM05D000181 ORTHO05D007950 3.4e-41 171.8 126 61.9
Cpa.g.sc51.10 Carica papaya HOM05D000181 ORTHO05D007950 5.8e-41 171.0 126 64.3
Manes.08G141200 Manihot esculenta HOM05D000181 ORTHO05D007950 5.8e-41 171.0 126 60.3
CAN.G1284.1 Capsicum annuum HOM05D000181 ORTHO05D007950 9.9e-41 170.2 126 60.3
Duzib177G0506 Durio zibethinus HOM05D000181 ORTHO05D007950 9.9e-41 170.2 126 61.1
Nitab4.5_0000100g0290 Nicotiana tabacum HOM05D000181 ORTHO05D007950 1.7e-40 169.5 126 61.1
Sc16g0009800 Simmondsia chinensis HOM05D000181 ORTHO05D007950 2.9e-40 168.7 126 59.5
Nn4g25637 Nelumbo nucifera HOM05D000181 ORTHO05D007950 3.8e-40 168.3 126 60.3
Phvul.L002051 Phaseolus vulgaris HOM05D000181 ORTHO05D007950 6.4e-40 167.5 128 60.9
GSVIVG01021791001 Vitis vinifera HOM05D000181 ORTHO05D007950 1.4e-39 166.4 126 61.1
CDE12G0825 Ceratophyllum demersum HOM05D000181 ORTHO05D007950 1.9e-39 166.0 127 59.8
MSTRG.2063 Avicennia marina HOM05D000181 ORTHO05D007950 3.2e-39 165.2 126 55.6
Migut.E00692 Erythranthe guttata HOM05D000181 ORTHO05D007950 3.2e-39 165.2 128 56.2
Ciclev10030569m.g Citrus clementina HOM05D000181 ORTHO05D007950 4.2e-39 164.9 126 62.7
Sed0008679 Sechium edule HOM05D000181 ORTHO05D007950 5.4e-39 164.5 128 56.2
MELO3C010145.2 Cucumis melo HOM05D000181 ORTHO05D007950 7.1e-39 164.1 128 57.0
Glyma.10G164800 Glycine max HOM05D000181 ORTHO05D007950 7.1e-39 164.1 128 59.4
Aqoxy2G02791 Aquilegia oxysepala HOM05D000181 ORTHO05D007950 9.3e-39 163.7 130 56.9
Lj5g0022962 Lotus japonicus HOM05D000181 ORTHO05D007950 1.2e-38 163.3 128 59.4
SalBow6G6839 Salvia bowleyana HOM05D000181 ORTHO05D007950 1.6e-38 162.9 126 57.1
Lalb_Chr06g0168211 Lupinus albus HOM05D000181 ORTHO05D007950 2.1e-38 162.5 128 59.4
ATR0064G121 Amborella trichopoda HOM05D000181 ORTHO05D007950 3.5e-38 161.8 126 55.6
THA.LOC104827282 Tarenaya hassleriana HOM05D000181 ORTHO05D007950 6.0e-38 161.0 126 60.3
CsaV3_1G045170 Cucumis sativus L. HOM05D000181 ORTHO05D007950 7.9e-38 160.6 123 58.5
Glyma.20G227000 Glycine max HOM05D000181 ORTHO05D007950 7.9e-38 160.6 128 58.6
CARHR078520 Cardamine hirsuta HOM05D000181 ORTHO05D007950 1.0e-37 160.2 126 59.5
AL3G14330 Arabidopsis lyrata HOM05D000181 ORTHO05D007950 1.3e-37 159.8 126 60.3
Carub.0003s0355 Capsella rubella HOM05D000181 ORTHO05D007950 1.3e-37 159.8 126 59.5
HanXRQChr15g0472161 Helianthus annuus HOM05D000181 ORTHO05D007950 1.3e-37 159.8 123 58.5
VMungo0720G1286 Vigna mungo HOM05D000181 ORTHO05D007950 1.3e-37 159.8 128 57.8
A05p43110 Brassica napus HOM05D000181 ORTHO05D007950 1.8e-37 159.5 127 59.1
BraA05t23054Z Brassica rapa HOM05D000181 ORTHO05D007950 1.8e-37 159.5 127 59.1
BcaC05g30203 Brassica carinata HOM05D000181 ORTHO05D007950 2.3e-37 159.1 126 59.5
arahy.Tifrunner.gnm1.ann1.F17Y7U Arachis hypogaea HOM05D000181 ORTHO05D007950 3.9e-37 158.3 126 58.7
arahy.Tifrunner.gnm1.ann1.F7IFNT Arachis hypogaea HOM05D000181 ORTHO05D007950 3.9e-37 158.3 126 60.3
AT3G04340 Arabidopsis thaliana HOM05D000181 ORTHO05D007950 1.1e-36 156.8 126 58.7
ECA246G2912 Erigeron canadensis HOM05D000181 ORTHO05D007950 1.1e-36 156.8 127 52.8
SGA_v2.0_scaffold8G04660 Striga asiatica HOM05D000181 ORTHO05D007950 1.1e-36 156.8 119 58.0
BcaC05g29949 Brassica carinata HOM05D000181 ORTHO05D007950 1.5e-36 156.4 126 58.7
BolC5t34940H Brassica oleracea HOM05D000181 ORTHO05D007950 1.5e-36 156.4 126 58.7
Sp3g03230 Schrenkiella parvula HOM05D000181 ORTHO05D007950 1.9e-36 156.0 126 58.7
C05p62850 Brassica napus HOM05D000181 ORTHO05D007950 2.5e-36 155.6 126 58.7
EL10Ac4g09755 Beta vulgaris HOM05D000181 ORTHO05D007950 7.4e-36 154.1 126 55.6
Thhalv10019907m.g Eutrema salsugineum HOM05D000181 ORTHO05D007950 9.6e-36 153.7 126 57.1
DCAR_030391 Daucus carota HOM05D000181 ORTHO05D007950 2.1e-35 152.5 126 55.6
Aa31LG5G14810 Aethionema arabicum HOM05D000181 ORTHO05D007950 1.4e-34 149.8 128 56.2
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 1.4e-34 149.8 128 50.0
TPR.G26633 Trifolium pratense HOM05D000181 ORTHO05D007950 2.4e-34 149.1 107 66.4
ClCG03G010030 Citrullus lanatus HOM05D000181 ORTHO05D007950 4.0e-34 148.3 153 47.7
AUR62006983 Chenopodium quinoa HOM05D000181 ORTHO05D007950 9.0e-34 147.1 127 54.3
HPP92_003200 Vanilla planifolia HOM05D000181 ORTHO05D007950 1.2e-33 146.7 104 63.5
Lsat_1_v5_gn_3_35721 Lactuca sativa HOM05D000181 ORTHO05D007950 2.0e-33 146.0 114 56.1
AUR62000630 Chenopodium quinoa HOM05D000181 ORTHO05D007950 1.3e-32 143.3 127 54.3
Ca_10026_v3 Cicer arietinum L. HOM05D000181 ORTHO05D007950 1.3e-32 143.3 125 56.0
Psat6g144440 Pisum sativum HOM05D000181 ORTHO05D007950 6.4e-32 141.0 128 51.6
Medtr1g080430 Medicago truncatula HOM05D000181 ORTHO05D007950 9.3e-31 137.1 122 55.7
Eucgr.E01405 Eucalyptus grandis HOM05D000181 ORTHO05D007950 7.1e-23 110.9 82 70.7
Mapoly0016s0072 Marchantia polymorpha HOM05D000181 ORTHO05D007950 7.9e-22 107.5 126 36.5
AagrBONN_evm.TU.Sc2ySwM_368.2554 Anthoceros agrestis HOM05D000181 ORTHO05D007950 1.3e-21 106.7 128 36.7
SEGI_28899 Sequoiadendron giganteum HOM05D000181 ORTHO05D007950 1.8e-21 106.3 111 45.9
Pp3c3_13130 Physcomitrium patens HOM05D000181 ORTHO05D007950 1.4e-18 96.7 128 34.4
Lj6A720G54 Lonicera japonica HOM05D000181 ORTHO05D007950 1.5e-17 93.2 125 39.2
Pp3c13_19380 Physcomitrium patens HOM05D000181 ORTHO05D007950 4.5e-17 91.7 128 33.6
SMO119G0201 Selaginella moellendorffii HOM05D000181 ORTHO05D007950 1.1e-15 87.0 126 31.7
COL.COLO4_15521 Corchorus olitorius HOM05D000181 ORTHO05D007950 7.9e-14 80.9 58 62.1


User provided reference genes

Program Settings