Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02138 Eucalyptus grandis HOM05D006435 ORTHO05D008262 5.6e-142 507.7 273 100.0
Eucgr.C01580 Eucalyptus grandis HOM05D006435 ORTHO05D008262 3.5e-136 488.4 304 89.1
TWI32G0701 Tripterygium wilfordii HOM05D006435 ORTHO05D008262 1.2e-83 313.9 246 68.7
QL12p026394 Quercus lobata HOM05D006435 ORTHO05D008262 2.3e-79 299.7 286 59.8
CiPaw.07G207200 Carya illinoinensis HOM05D006435 ORTHO05D008262 5.2e-79 298.5 228 68.4
CSS0040195 Camellia sinensis var. sinensis HOM05D006435 ORTHO05D008262 8.9e-79 297.7 252 65.5
Hma1.2p1_0140F.1_g063520 Hydrangea macrophylla HOM05D006435 ORTHO05D008262 5.7e-78 295.0 230 68.7
Actinidia31221 Actinidia chinensis HOM05D006435 ORTHO05D008262 9.8e-78 294.3 289 59.9
GSVIVG01035670001 Vitis vinifera HOM05D006435 ORTHO05D008262 1.7e-77 293.5 277 59.9
Manes.03G062800 Manihot esculenta HOM05D006435 ORTHO05D008262 2.2e-77 293.1 285 58.9
Aa31LG11G4730 Aethionema arabicum HOM05D006435 ORTHO05D008262 2.8e-77 292.7 241 65.1
Thecc.09G039800 Theobroma cacao HOM05D006435 ORTHO05D008262 2.8e-77 292.7 263 61.2
CARHR187680 Cardamine hirsuta HOM05D006435 ORTHO05D008262 4.9e-77 292.0 234 65.8
Rhsim02G0182200 Rhododendron simsii HOM05D006435 ORTHO05D008262 8.3e-77 291.2 286 58.0
MELO3C003582.2 Cucumis melo HOM05D006435 ORTHO05D008262 1.1e-76 290.8 228 67.1
BraA02t08928Z Brassica rapa HOM05D006435 ORTHO05D008262 1.4e-76 290.4 284 58.8
BcaC03g17897 Brassica carinata HOM05D006435 ORTHO05D008262 1.8e-76 290.0 285 58.2
C02p59390 Brassica napus HOM05D006435 ORTHO05D008262 1.8e-76 290.0 285 58.2
Ciclev10009372m.g Citrus clementina HOM05D006435 ORTHO05D008262 3.2e-76 289.3 228 66.7
Sp2g21890 Schrenkiella parvula HOM05D006435 ORTHO05D008262 3.2e-76 289.3 282 57.8
THA.LOC104815054 Tarenaya hassleriana HOM05D006435 ORTHO05D008262 4.1e-76 288.9 281 60.1
BcaB07g29986 Brassica carinata HOM05D006435 ORTHO05D008262 5.4e-76 288.5 283 58.0
Lj8C603T5 Lonicera japonica HOM05D006435 ORTHO05D008262 5.4e-76 288.5 295 59.3
Duzib187G0700 Durio zibethinus HOM05D006435 ORTHO05D008262 7.0e-76 288.1 268 59.7
AL6G37530 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 1.6e-75 287.0 262 60.3
arahy.Tifrunner.gnm1.ann1.463B8J Arachis hypogaea HOM05D006435 ORTHO05D008262 1.6e-75 287.0 266 61.3
Atru.chr7.2160 Acer truncatum HOM05D006435 ORTHO05D008262 2.0e-75 286.6 292 58.9
Cfa013344 Carpinus fangiana HOM05D006435 ORTHO05D008262 2.7e-75 286.2 279 59.9
arahy.Tifrunner.gnm1.ann1.W16L9Q Arachis hypogaea HOM05D006435 ORTHO05D008262 4.5e-75 285.4 266 60.9
Thhalv10004692m.g Eutrema salsugineum HOM05D006435 ORTHO05D008262 7.8e-75 284.6 237 62.9
Cpa.g.sc78.80 Carica papaya HOM05D006435 ORTHO05D008262 1.0e-74 284.3 233 65.7
vmacro11085 Vaccinium macrocarpon HOM05D006435 ORTHO05D008262 1.3e-74 283.9 280 57.9
Nn2g11721 Nelumbo nucifera HOM05D006435 ORTHO05D008262 1.7e-74 283.5 256 61.7
Aqoxy7G01634 Aquilegia oxysepala HOM05D006435 ORTHO05D008262 2.3e-74 283.1 216 71.3
Gohir.D05G050300 Gossypium hirsutum HOM05D006435 ORTHO05D008262 2.3e-74 283.1 255 62.0
DCAR_007705 Daucus carota HOM05D006435 ORTHO05D008262 8.6e-74 281.2 216 69.0
Hund19545 Selenicereus undatus HOM05D006435 ORTHO05D008262 1.1e-73 280.8 221 66.5
PGSC0003DMG400014515 Solanum tuberosum HOM05D006435 ORTHO05D008262 1.1e-73 280.8 243 62.6
CsaV3_3G047410 Cucumis sativus L. HOM05D006435 ORTHO05D008262 1.9e-73 280.0 218 69.3
CANSAT80G2129 Cannabis sativa HOM05D006435 ORTHO05D008262 3.3e-73 279.3 225 65.8
Carub.0006s2947 Capsella rubella HOM05D006435 ORTHO05D008262 7.3e-73 278.1 264 58.7
Sopen08g022120 Solanum pennellii HOM05D006435 ORTHO05D008262 7.3e-73 278.1 243 62.1
SGA_v2.0_scaffold280G46829 Striga asiatica HOM05D006435 ORTHO05D008262 7.3e-73 278.1 276 56.5
Solyc08g068270.3 Solanum lycopersicum HOM05D006435 ORTHO05D008262 9.5e-73 277.7 243 62.1
Cc00_g17690 Coffea canephora HOM05D006435 ORTHO05D008262 1.2e-72 277.3 271 59.0
Lalb_Chr22g0360991 Lupinus albus HOM05D006435 ORTHO05D008262 2.8e-72 276.2 215 70.7
Potri.018G037300 Populus trichocarpa HOM05D006435 ORTHO05D008262 2.8e-72 276.2 291 56.4
Lj1g0009240 Lotus japonicus HOM05D006435 ORTHO05D008262 4.7e-72 275.4 219 66.2
VMungo0647G0379 Vigna mungo HOM05D006435 ORTHO05D008262 4.7e-72 275.4 219 66.7
Lsat_1_v5_gn_6_10980 Lactuca sativa HOM05D006435 ORTHO05D008262 6.1e-72 275.0 237 63.3
Oeu063249.1 Olea europaea HOM05D006435 ORTHO05D008262 1.0e-71 274.2 231 63.2
Medtr1g008300 Medicago truncatula HOM05D006435 ORTHO05D008262 1.4e-71 273.9 216 66.7
Gohir.A05G048400 Gossypium hirsutum HOM05D006435 ORTHO05D008262 3.1e-71 272.7 226 66.4
MBI01_g28042_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 4.0e-71 272.3 271 59.4
PSO782G5114 Papaver somniferum HOM05D006435 ORTHO05D008262 4.0e-71 272.3 288 55.9
Glyma.17G190400 Glycine max HOM05D006435 ORTHO05D008262 6.8e-71 271.6 270 60.0
ATR0315G035 Amborella trichopoda HOM05D006435 ORTHO05D008262 8.9e-71 271.2 232 64.2
AUR62009330 Chenopodium quinoa HOM05D006435 ORTHO05D008262 1.2e-70 270.8 216 68.1
SalBow4G2069 Salvia bowleyana HOM05D006435 ORTHO05D008262 1.5e-70 270.4 246 61.8
EL10Ac2g04073 Beta vulgaris HOM05D006435 ORTHO05D008262 2.6e-70 269.6 224 67.4
Dinv30253 Davidia involucrata HOM05D006435 ORTHO05D004219 4.4e-70 268.9 216 68.1
TPR.G12017 Trifolium pratense HOM05D006435 ORTHO05D008262 5.8e-70 268.5 221 65.2
Ah.16g105260 Amaranthus hybridus HOM05D006435 ORTHO05D008262 9.8e-70 267.7 222 65.8
CDE05G2477 Ceratophyllum demersum HOM05D006435 ORTHO05D008262 9.8e-70 267.7 233 62.2
MD15G1097700 Malus domestica HOM05D006435 ORTHO05D008262 1.3e-69 267.3 289 54.3
HPP92_001799 Vanilla planifolia HOM05D006435 ORTHO05D008262 2.2e-69 266.5 222 64.4
Gorai.009G051800 Gossypium raimondii HOM05D006435 ORTHO05D008262 4.9e-69 265.4 222 65.8
Prupe.1G452600 Prunus persica HOM05D006435 ORTHO05D008262 4.9e-69 265.4 291 55.3
PSO832G3386 Papaver somniferum HOM05D006435 ORTHO05D008262 6.4e-69 265.0 285 55.4
Phvul.001G078600 Phaseolus vulgaris HOM05D006435 ORTHO05D008262 8.3e-69 264.6 264 58.3
AUR62023016 Chenopodium quinoa HOM05D006435 ORTHO05D008262 1.1e-68 264.2 213 67.6
CAN.G797.1 Capsicum annuum HOM05D006435 ORTHO05D008262 1.9e-68 263.5 272 56.6
Sed0025420 Sechium edule HOM05D006435 ORTHO05D008262 4.1e-68 262.3 218 65.1
MSTRG.11716 Avicennia marina HOM05D006435 ORTHO05D008262 9.2e-68 261.2 267 58.1
Nitab4.5_0003338g0080 Nicotiana tabacum HOM05D006435 ORTHO05D008262 9.2e-68 261.2 201 66.7
FvH4_2g36120 Fragaria vesca HOM05D006435 ORTHO05D008262 3.5e-67 259.2 274 53.3
FAN20G0337 Fragaria x ananassa HOM05D006435 ORTHO05D008262 3.5e-67 259.2 224 61.6
FAN27G2865 Fragaria x ananassa HOM05D006435 ORTHO05D008262 1.3e-66 257.3 215 62.3
HanXRQChr02g0048091 Helianthus annuus HOM05D006435 ORTHO05D008262 1.3e-66 257.3 279 55.2
RcHm_v2.0_Chr6g0305751 Rosa chinensis HOM05D006435 ORTHO05D008262 1.3e-66 257.3 270 55.6
Migut.A00245 Erythranthe guttata HOM05D006435 ORTHO05D008262 1.9e-65 253.4 267 56.2
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 1.2e-64 250.8 233 56.7
TAR624G0864 Trochodendron aralioides HOM05D006435 ORTHO05D008262 1.6e-64 250.4 151 84.1
COL.COLO4_18696 Corchorus olitorius HOM05D006435 ORTHO05D008262 8.0e-64 248.1 267 56.2
VMungo1215G1854 Vigna mungo HOM05D006435 ORTHO05D008262 8.0e-64 248.1 199 65.8
ECA233G4084 Erigeron canadensis HOM05D006435 ORTHO05D008262 2.3e-63 246.5 211 64.0
Sc09g0009090 Simmondsia chinensis HOM05D006435 ORTHO05D008262 2.3e-63 246.5 220 61.4
SEGI_13627 Sequoiadendron giganteum HOM05D006435 ORTHO05D008262 4.0e-63 245.7 223 61.4
Nitab4.5_0000052g0140 Nicotiana tabacum HOM05D006435 ORTHO05D008262 2.6e-62 243.0 253 55.3
PGR031G0325 Punica granatum HOM05D006435 ORTHO05D008262 3.4e-62 242.7 243 59.7
Haze_21849 Corylus avellana HOM05D006435 ORTHO05D008262 9.8e-62 241.1 153 80.4
ClCG11G014010 Citrullus lanatus HOM05D006435 ORTHO05D008262 1.3e-61 240.7 242 57.4
Os05g0220600 Oryza sativa ssp. japonica HOM05D006435 ORTHO05D008262 2.9e-61 239.6 223 59.2
Zm00001eb350490 Zea mays HOM05D006435 ORTHO05D008262 3.9e-58 229.2 281 50.5
MBI01_g28043_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 1.2e-54 217.6 184 64.7
Mapoly0109s0030 Marchantia polymorpha HOM05D006435 ORTHO05D008262 3.4e-54 216.1 214 56.5
AagrBONN_evm.TU.Sc2ySwM_117.700 Anthoceros agrestis HOM05D006435 ORTHO05D008262 2.9e-53 213.0 204 57.8
Pp3c15_3110 Physcomitrium patens HOM05D006435 ORTHO05D008262 4.9e-53 212.2 212 58.5
AL6G37520 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 1.1e-52 211.1 242 51.7
Ca_12811_v3 Cicer arietinum L. HOM05D006435 ORTHO05D008262 1.2e-51 207.6 140 75.0
Carub.0006s2351 Capsella rubella HOM05D006435 ORTHO05D008262 1.6e-51 207.2 269 48.0
Peaxi162Scf00523g00529 Petunia axillaris HOM05D006435 ORTHO05D008262 1.3e-50 204.1 134 77.6
AT5G25640 Arabidopsis thaliana HOM05D006435 ORTHO05D008262 2.5e-49 199.9 278 47.1
SMO116G0425 Selaginella moellendorffii HOM05D006435 ORTHO05D008262 1.6e-48 197.2 259 44.4
Psat6g034280 Pisum sativum HOM05D006435 ORTHO05D008262 6.2e-48 195.3 166 63.9
Solyc10g012245.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 6.8e-47 191.8 207 55.6
Glyma.14G141900 Glycine max HOM05D006435 ORTHO05D008262 6.0e-43 178.7 110 83.6
Ciclev10010273m.g Citrus clementina HOM05D006435 ORTHO05D008262 8.7e-42 174.9 129 71.3
Sabra18G0038100 Salix brachista HOM05D006435 ORTHO05D008262 1.6e-40 170.6 260 44.6
PSO782G2728 Papaver somniferum HOM05D006435 ORTHO05D008262 5.3e-31 139.0 183 41.5
PRCOL_00005434 Prasinoderma coloniale HOM05D006435 ORTHO05D008262 3.2e-28 129.8 143 46.9
PSO782G5630 Papaver somniferum HOM05D006435 ORTHO05D008262 7.1e-28 128.6 187 41.7
Solyc10g012295.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 1.2e-27 127.9 146 51.4
Cre16.g664801 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D008262 6.7e-26 122.1 193 38.3
MD08G1118500 Malus domestica HOM05D006435 ORTHO05D008262 2.6e-22 110.2 85 63.5
MBI01_g46977_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 7.4e-17 92.0 103 53.4
PSO832G3154 Papaver somniferum HOM05D006435 ORTHO05D008262 4.8e-16 89.4 175 37.7
A02p39610 Brassica napus HOM05D006435 ORTHO05D008262 8.4e-13 78.6 143 40.6
Peaxi162Scf00523g00528 Petunia axillaris HOM05D006435 ORTHO05D008262 9.3e-12 75.1 95 47.4
FAN15G2703 Fragaria x ananassa HOM05D006435 ORTHO05D008262 2.2e-08 63.9 117 34.2
Haze_21850 Corylus avellana HOM05D006435 ORTHO05D008262 8.2e-08 62.0 114 38.6
Ca_12801_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 5.3e-07 59.3 51 56.9
Glyma.14G142000 Glycine max HOM05D006435 ORTHO05D008262 1.5e-06 57.8 44 65.9
BraA10t44950Z Brassica rapa HOM05D000659 ORTHO05D000505 1.0e-05 55.1 140 35.0
SMO146G0272 Selaginella moellendorffii HOM05D000659 ORTHO05D000505 1.0e-05 55.1 160 31.9


User provided reference genes

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