Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01946 Eucalyptus grandis HOM05D000032 ORTHO05D007378 1.6e-117 426.0 208 100.0
Eucgr.B02194 Eucalyptus grandis HOM05D000032 ORTHO05D007378 3.0e-63 245.7 200 68.5
Eucgr.L01074 Eucalyptus grandis HOM05D000032 ORTHO05D007378 2.7e-59 232.6 202 64.9
TAR636G3150 Trochodendron aralioides HOM05D000032 ORTHO05D007378 3.0e-50 202.6 198 55.1
PGR031G1822 Punica granatum HOM05D000032 ORTHO05D007378 5.0e-50 201.8 201 56.7
Lalb_Chr23g0264971 Lupinus albus HOM05D000032 ORTHO05D007378 2.5e-49 199.5 198 55.6
Ciclev10019165m.g Citrus clementina HOM05D000032 ORTHO05D007378 2.1e-48 196.4 198 53.5
arahy.Tifrunner.gnm1.ann1.H15IA8 Arachis hypogaea HOM05D000032 ORTHO05D007378 2.8e-48 196.1 200 55.0
arahy.Tifrunner.gnm1.ann1.RWH2RP Arachis hypogaea HOM05D000032 ORTHO05D007378 2.8e-48 196.1 200 55.0
Actinidia29360 Actinidia chinensis HOM05D000032 ORTHO05D007378 1.8e-47 193.4 198 54.0
Oeu041288.2 Olea europaea HOM05D000032 ORTHO05D007378 3.1e-47 192.6 198 52.5
Carub.0003s0650 Capsella rubella HOM05D000032 ORTHO05D007378 4.0e-47 192.2 198 52.5
Nn4g25241 Nelumbo nucifera HOM05D000032 ORTHO05D007378 4.0e-47 192.2 198 53.5
AL3G18160 Arabidopsis lyrata HOM05D000032 ORTHO05D007378 8.9e-47 191.0 198 52.0
Migut.H01047 Erythranthe guttata HOM05D000032 ORTHO05D007378 8.9e-47 191.0 201 50.7
Hma1.2p1_0050F.1_g029190 Hydrangea macrophylla HOM05D000032 ORTHO05D007378 8.9e-47 191.0 204 53.4
Lj3A842G68 Lonicera japonica HOM05D000032 ORTHO05D007378 8.9e-47 191.0 198 53.5
Potri.010G004700 Populus trichocarpa HOM05D000032 ORTHO05D007378 1.5e-46 190.3 199 52.3
AT3G06980 Arabidopsis thaliana HOM05D000032 ORTHO05D007378 2.0e-46 189.9 198 51.5
Cfa010333 Carpinus fangiana HOM05D000032 ORTHO05D007378 2.0e-46 189.9 198 53.0
Glyma.04G002600 Glycine max HOM05D000032 ORTHO05D007378 2.0e-46 189.9 198 53.0
Sopen11g020630 Solanum pennellii HOM05D000032 ORTHO05D007378 2.0e-46 189.9 198 52.5
CiPaw.14G043800 Carya illinoinensis HOM05D000032 ORTHO05D007378 3.4e-46 189.1 201 52.7
Nitab4.5_0000100g0040 Nicotiana tabacum HOM05D000032 ORTHO05D007378 4.4e-46 188.7 198 51.5
SGA_v2.0_scaffold109G31096 Striga asiatica HOM05D000032 ORTHO05D007378 4.4e-46 188.7 201 50.2
CARHR081590 Cardamine hirsuta HOM05D000032 ORTHO05D007378 5.8e-46 188.3 198 51.5
Cpa.g.sc146.4 Carica papaya HOM05D000032 ORTHO05D007378 9.8e-46 187.6 198 52.0
Thhalv10020145m.g Eutrema salsugineum HOM05D000032 ORTHO05D007378 9.8e-46 187.6 198 51.5
Glyma.06G002600 Glycine max HOM05D000032 ORTHO05D007378 9.8e-46 187.6 198 52.5
QL09p046662 Quercus lobata HOM05D000032 ORTHO05D007378 9.8e-46 187.6 198 52.5
Lsat_1_v5_gn_8_109040 Lactuca sativa HOM05D000032 ORTHO05D007378 1.3e-45 187.2 193 52.8
arahy.Tifrunner.gnm1.ann1.CRY945 Arachis hypogaea HOM05D000032 ORTHO05D007378 1.7e-45 186.8 206 52.9
CAN.G31.10 Capsicum annuum HOM05D000032 ORTHO05D007378 1.7e-45 186.8 198 52.0
Manes.13G083900 Manihot esculenta HOM05D000032 ORTHO05D007378 1.7e-45 186.8 200 51.5
Sp3g05940 Schrenkiella parvula HOM05D000032 ORTHO05D007378 2.2e-45 186.4 198 51.0
Aqoxy5G03969 Aquilegia oxysepala HOM05D000032 ORTHO05D007378 4.9e-45 185.3 198 51.0
Phvul.009G118200 Phaseolus vulgaris HOM05D000032 ORTHO05D007378 4.9e-45 185.3 198 51.5
VMungo1309G1941 Vigna mungo HOM05D000032 ORTHO05D007378 4.9e-45 185.3 198 51.0
Nitab4.5_0000607g0080 Nicotiana tabacum HOM05D000032 ORTHO05D007378 8.3e-45 184.5 198 50.5
Sabra10G0004100 Salix brachista HOM05D000032 ORTHO05D007378 8.3e-45 184.5 198 51.0
THA.LOC104827347 Tarenaya hassleriana HOM05D000032 ORTHO05D007378 8.3e-45 184.5 200 50.0
Aa31LG5G17540 Aethionema arabicum HOM05D000032 ORTHO05D007378 1.1e-44 184.1 198 50.5
MSTRG.14194 Avicennia marina HOM05D000032 ORTHO05D007378 1.1e-44 184.1 201 49.3
Dinv29492 Davidia involucrata HOM05D000032 ORTHO05D007378 1.1e-44 184.1 198 53.5
Prupe.1G209200 Prunus persica HOM05D000032 ORTHO05D007378 1.1e-44 184.1 198 51.5
HanXRQChr12g0357911 Helianthus annuus HOM05D000032 ORTHO05D007378 3.2e-44 182.6 193 51.3
ECA236G4337 Erigeron canadensis HOM05D000032 ORTHO05D007378 5.4e-44 181.8 193 51.3
TWI09G0253 Tripterygium wilfordii HOM05D000032 ORTHO05D007378 5.4e-44 181.8 198 51.0
Atru.chr4.3196 Acer truncatum HOM05D000032 ORTHO05D007378 9.2e-44 181.0 198 50.0
RcHm_v2.0_Chr4g0428121 Rosa chinensis HOM05D000032 ORTHO05D007378 9.2e-44 181.0 198 52.0
Hund22662 Selenicereus undatus HOM05D000032 ORTHO05D007378 1.2e-43 180.6 198 52.0
GSVIVG01017719001 Vitis vinifera HOM05D000032 ORTHO05D007378 1.2e-43 180.6 198 51.0
Sed0021297 Sechium edule HOM05D000032 ORTHO05D007378 1.6e-43 180.3 198 50.5
FAN12G2293 Fragaria x ananassa HOM05D000032 ORTHO05D007378 2.1e-43 179.9 198 51.0
Cc04_g12290 Coffea canephora HOM05D000032 ORTHO05D007378 2.7e-43 179.5 198 49.5
Atru.BG.98.p Acer truncatum HOM05D000032 ORTHO05D007378 3.5e-43 179.1 198 49.5
A05p41210 Brassica napus HOM05D000032 ORTHO05D007378 3.5e-43 179.1 198 49.0
BcaC05g29829 Brassica carinata HOM05D000032 ORTHO05D007378 7.8e-43 177.9 198 49.0
C05p60420 Brassica napus HOM05D000032 ORTHO05D007378 7.8e-43 177.9 198 49.0
FAN07G2341 Fragaria x ananassa HOM05D000032 ORTHO05D007378 7.8e-43 177.9 198 51.0
TPR.G38557 Trifolium pratense HOM05D000032 ORTHO05D007378 7.8e-43 177.9 198 50.5
EL10Ac3g06215 Beta vulgaris HOM05D000032 ORTHO05D007378 1.0e-42 177.6 212 48.6
BraA05t22844Z Brassica rapa HOM05D000032 ORTHO05D007378 1.0e-42 177.6 198 48.5
Ca_15290_v3 Cicer arietinum L. HOM05D000032 ORTHO05D007378 1.0e-42 177.6 198 50.0
ClCG05G006990 Citrullus lanatus HOM05D000032 ORTHO05D007378 1.0e-42 177.6 202 50.0
BcaC05g29763 Brassica carinata HOM05D000032 ORTHO05D007378 1.3e-42 177.2 198 49.5
MELO3C006765.2 Cucumis melo HOM05D000032 ORTHO05D007378 1.3e-42 177.2 198 50.5
Lj1g0014517 Lotus japonicus HOM05D000032 ORTHO05D007378 1.3e-42 177.2 198 50.0
Medtr3g118120 Medicago truncatula HOM05D000032 ORTHO05D007378 1.7e-42 176.8 198 50.0
BolC5t34688H Brassica oleracea HOM05D000032 ORTHO05D007378 2.3e-42 176.4 198 48.0
MD16G1131600 Malus domestica HOM05D000032 ORTHO05D007378 2.3e-42 176.4 198 49.5
AUR62002520 Chenopodium quinoa HOM05D000032 ORTHO05D007378 3.0e-42 176.0 198 50.5
Rhsim02G0173200 Rhododendron simsii HOM05D000032 ORTHO05D007378 6.6e-42 174.9 199 49.7
AUR62023674 Chenopodium quinoa HOM05D000032 ORTHO05D007378 8.6e-42 174.5 198 50.0
CsaV3_3G015680 Cucumis sativus L. HOM05D000032 ORTHO05D007378 1.1e-41 174.1 198 50.0
DCAR_026922 Daucus carota HOM05D000032 ORTHO05D007378 1.5e-41 173.7 198 50.0
CDE12G0126 Ceratophyllum demersum HOM05D000032 ORTHO05D007378 2.5e-41 172.9 200 50.0
Psat5g001760 Pisum sativum HOM05D000032 ORTHO05D007378 5.6e-41 171.8 198 49.0
RcHm_v2.0_Chr4g0410871 Rosa chinensis HOM05D000032 ORTHO05D007378 5.6e-41 171.8 196 49.5
CANSAT01G2427 Cannabis sativa HOM05D000032 ORTHO05D007378 7.3e-41 171.4 199 48.2
Thecc.08G167400 Theobroma cacao HOM05D000032 ORTHO05D007378 9.5e-41 171.0 197 49.7
Duzib116G0019 Durio zibethinus HOM05D000032 ORTHO05D007378 2.8e-40 169.5 201 48.8
Gohir.A02G083900 Gossypium hirsutum HOM05D000032 ORTHO05D007378 2.8e-40 169.5 201 48.8
Gohir.D02G104400 Gossypium hirsutum HOM05D000032 ORTHO05D007378 2.8e-40 169.5 201 48.3
Gorai.005G118500 Gossypium raimondii HOM05D000032 ORTHO05D007378 3.6e-40 169.1 200 48.5
Eucgr.B02191 Eucalyptus grandis HOM05D000032 ORTHO05D007378 6.2e-40 168.3 123 70.7
HPP92_010024 Vanilla planifolia HOM05D000032 ORTHO05D007378 8.1e-40 167.9 203 45.3
ATR0796G242 Amborella trichopoda HOM05D000032 ORTHO05D007378 1.1e-39 167.5 203 46.3
Os03g0108600 Oryza sativa ssp. japonica HOM05D000032 ORTHO05D007378 4.0e-39 165.6 200 45.5
HPP92_015296 Vanilla planifolia HOM05D000032 ORTHO05D007378 6.8e-39 164.9 203 44.8
COL.COLO4_25110 Corchorus olitorius HOM05D000032 ORTHO05D007378 1.5e-38 163.7 201 47.3
MBI18_g03874_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D007378 2.2e-37 159.8 198 48.0
PSO063G4518 Papaver somniferum HOM05D000032 ORTHO05D007378 3.7e-37 159.1 199 46.7
PSO782G0571 Papaver somniferum HOM05D000032 ORTHO05D007378 4.9e-37 158.7 199 46.7
Haze_03303 Corylus avellana HOM05D000032 ORTHO05D007378 4.1e-36 155.6 250 40.0
Hma1.2p1_0050F.1_g029160 Hydrangea macrophylla HOM05D000032 ORTHO05D007378 2.1e-35 153.3 171 52.6
Ah.13g073080 Amaranthus hybridus HOM05D000032 ORTHO05D007378 1.3e-34 150.6 186 47.3
Solyc11g045180.3 Solanum lycopersicum HOM05D000032 ORTHO05D007378 3.9e-34 149.1 160 48.8
FAN17G1552 Fragaria x ananassa HOM05D000032 ORTHO05D007378 5.1e-34 148.7 181 47.0
Sc25g0001800 Simmondsia chinensis HOM05D000032 ORTHO05D007378 1.9e-33 146.7 175 46.9
CSS0009259 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D007378 9.5e-33 144.4 130 53.8
CSS0031989 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D007378 2.1e-32 143.3 130 53.8
Peaxi162Scf00126g00525 Petunia axillaris HOM05D000032 ORTHO05D007378 1.2e-30 137.5 128 51.6
Mapoly0008s0120 Marchantia polymorpha HOM05D000032 ORTHO05D007378 1.5e-30 137.1 202 40.6
SMO353G0087 Selaginella moellendorffii HOM05D000032 ORTHO05D007378 4.2e-28 129.0 201 38.3
Pp3c13_13090 Physcomitrium patens HOM05D000032 ORTHO05D007378 1.2e-27 127.5 204 40.2
C06p49390 Brassica napus HOM05D000032 ORTHO05D007378 2.1e-27 126.7 130 47.7
BolC6t39973H Brassica oleracea HOM05D000134 ORTHO05D007378 2.1e-27 126.7 128 48.4
Zm00001eb404280 Zea mays HOM05D000032 ORTHO05D007378 7.8e-27 124.8 173 43.4
AagrBONN_evm.TU.Sc2ySwM_228.3967 Anthoceros agrestis HOM05D000032 ORTHO05D007378 6.6e-26 121.7 201 35.3
SMO364G0895 Selaginella moellendorffii HOM05D000032 ORTHO05D007378 4.3e-25 119.0 191 37.7
BcaC08g47358 Brassica carinata HOM05D000032 ORTHO05D007378 4.7e-24 115.5 123 47.2
CBR_g39730 Chara braunii HOM05D000032 ORTHO05D007378 4.0e-23 112.5 202 35.1
FvH4_4g21860 Fragaria vesca HOM05D000032 ORTHO05D007378 2.9e-21 106.3 116 52.6
CAN.G1354.6 Capsicum annuum HOM05D000032 ORTHO05D007378 3.6e-16 89.4 104 42.3
MCO15G117 Micromonas commoda HOM05D000032 ORTHO05D007378 6.0e-11 72.0 211 28.9
Peaxi162Scf00126g00526 Petunia axillaris HOM05D000032 ORTHO05D007378 1.5e-09 67.4 59 62.7
MCO09G723 Micromonas commoda HOM05D000032 ORTHO05D004353 2.6e-06 56.6 129 29.5


User provided reference genes

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