Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 7.2e-179 630.6 341 100.0
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 4.9e-143 511.5 280 98.6
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 4.6e-101 372.1 274 76.6
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 6.0e-101 371.7 272 74.3
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 5.6e-99 365.2 261 76.6
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.4e-97 359.8 274 72.3
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 4.5e-96 355.5 272 73.5
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.4e-94 350.5 277 71.1
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 1.4e-94 350.5 290 70.3
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 1.9e-94 350.1 214 86.0
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 1.9e-94 350.1 276 70.7
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 2.5e-94 349.7 279 70.6
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 3.2e-94 349.4 267 71.2
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 5.5e-94 348.6 270 72.2
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 1.6e-93 347.1 273 65.6
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 2.1e-93 346.7 270 71.1
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 4.6e-93 345.5 272 69.1
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 4.6e-93 345.5 273 66.3
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 7.9e-93 344.7 277 70.8
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 3.0e-92 342.8 272 71.7
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 6.7e-92 341.7 272 65.1
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 6.7e-92 341.7 272 65.1
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 3.3e-91 339.3 272 64.7
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 3.3e-91 339.3 279 68.8
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 6.3e-90 335.1 273 69.6
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 8.2e-90 334.7 277 67.5
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 1.1e-89 334.3 278 67.3
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 4.1e-89 332.4 272 66.9
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 1.2e-88 330.9 297 64.0
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.2e-88 330.9 271 68.3
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.5e-88 330.5 327 59.3
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 1.5e-88 330.5 211 77.7
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 3.4e-88 329.3 271 68.3
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 4.5e-88 328.9 276 67.8
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 5.9e-88 328.6 267 67.8
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 5.9e-88 328.6 275 68.4
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 5.9e-88 328.6 224 79.0
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 7.6e-88 328.2 280 66.1
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 1.3e-87 327.4 266 66.5
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 2.2e-87 326.6 272 68.0
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 2.9e-87 326.2 284 64.4
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 2.9e-87 326.2 277 70.0
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 2.9e-87 326.2 269 67.3
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 5.0e-87 325.5 269 66.9
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 6.5e-87 325.1 278 65.8
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 1.1e-86 324.3 272 66.2
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 1.1e-86 324.3 259 68.0
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 1.1e-86 324.3 259 68.0
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 1.4e-86 323.9 271 65.7
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 1.9e-86 323.6 274 66.4
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 1.9e-86 323.6 266 66.9
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 9.3e-86 321.2 269 66.2
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 1.2e-85 320.9 226 72.1
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 4.6e-85 318.9 214 80.4
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 7.9e-85 318.2 276 64.1
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 7.9e-85 318.2 271 65.7
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 7.9e-85 318.2 274 65.7
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 3.0e-84 316.2 278 64.4
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 1.1e-83 314.3 259 67.2
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 1.1e-83 314.3 199 86.4
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 1.5e-83 313.9 271 64.9
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.5e-83 313.9 269 66.9
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 2.5e-83 313.2 214 77.6
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 1.6e-82 310.5 214 78.0
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 1.8e-81 307.0 294 62.2
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 4.1e-81 305.8 213 77.9
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 9.0e-81 304.7 198 80.8
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 4.5e-80 302.4 271 63.5
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 4.5e-80 302.4 289 57.1
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 2.9e-79 299.7 208 79.3
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 3.8e-79 299.3 195 82.1
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 8.8e-76 288.1 219 69.9
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 3.3e-75 286.2 214 73.4
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 6.3e-74 282.0 218 68.8
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 3.1e-73 279.6 203 74.4
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 5.0e-71 272.3 212 69.8
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 3.2e-70 269.6 213 70.9
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 7.9e-69 265.0 262 55.3
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 1.1e-67 261.2 207 70.5
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 3.8e-63 246.1 174 72.4
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 1.7e-55 220.7 134 83.6
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 2.2e-55 220.3 158 74.7
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 2.2e-55 220.3 203 61.6
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 3.8e-55 219.5 148 79.1
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 5.0e-55 219.2 147 79.6
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 5.0e-55 219.2 158 74.7
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 2.3e-52 210.3 134 76.1
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 1.1e-41 174.9 109 85.3
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 4.1e-41 172.9 183 52.5
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 1.4e-36 157.9 107 77.6
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 1.9e-30 137.5 219 35.6
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 9.8e-27 125.2 74 89.2
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 3.6e-21 106.7 136 44.1
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 9.2e-17 92.0 54 85.2


User provided reference genes

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