Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 3.2e-165 585.1 318 100.0
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 9.6e-93 344.4 335 60.3
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 4.8e-92 342.0 335 60.0
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 8.1e-92 341.3 317 60.3
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 1.1e-91 340.9 333 59.2
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.0e-91 339.0 335 59.7
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.3e-91 338.6 335 59.4
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 9.0e-91 337.8 335 58.8
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 9.0e-91 337.8 335 59.4
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.6e-90 336.3 321 60.1
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 1.3e-89 334.0 319 59.2
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 4.9e-89 332.0 323 58.8
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 4.9e-89 332.0 320 59.1
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 2.4e-88 329.7 319 58.9
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 5.5e-88 328.6 333 55.9
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 9.3e-88 327.8 325 58.8
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 9.3e-88 327.8 322 58.4
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.2e-87 327.4 318 59.1
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 2.7e-87 326.2 331 55.9
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 7.9e-87 324.7 320 59.4
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 7.9e-87 324.7 333 55.3
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 1.8e-86 323.6 322 57.5
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 8.7e-86 321.2 322 58.1
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.5e-85 320.5 331 55.3
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 1.5e-85 320.5 321 58.3
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 5.6e-85 318.5 323 54.5
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 2.8e-84 316.2 320 56.2
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 4.8e-84 315.5 320 54.4
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 1.8e-83 313.5 319 56.1
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 2.4e-83 313.2 323 53.9
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 2.4e-83 313.2 323 53.9
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 3.4e-82 309.3 319 56.1
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 3.4e-82 309.3 333 55.3
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 3.4e-82 309.3 320 56.6
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 3.4e-82 309.3 329 55.3
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 1.3e-81 307.4 331 55.3
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 1.7e-81 307.0 322 56.8
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 1.7e-81 307.0 316 54.4
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 3.8e-81 305.8 319 53.6
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 1.9e-80 303.5 320 53.4
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 2.5e-80 303.1 316 55.4
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 4.2e-80 302.4 331 53.2
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 5.5e-80 302.0 321 55.1
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 7.1e-80 301.6 322 55.9
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 7.1e-80 301.6 318 53.1
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 7.1e-80 301.6 318 53.1
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 9.3e-80 301.2 245 64.5
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 1.6e-79 300.4 320 55.9
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 2.1e-79 300.1 323 54.2
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 3.5e-79 299.3 316 54.1
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 1.0e-78 297.7 320 54.1
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 1.3e-78 297.4 320 53.4
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 1.3e-78 297.4 329 53.5
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 5.1e-78 295.4 319 54.2
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.1e-77 294.3 321 53.9
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.1e-77 294.3 321 53.9
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 1.5e-77 293.9 316 54.7
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 2.5e-77 293.1 325 53.2
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 3.3e-77 292.7 331 52.9
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 3.3e-77 292.7 321 53.3
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 4.3e-77 292.4 315 54.3
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 5.7e-77 292.0 320 53.1
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 9.7e-77 291.2 299 56.2
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 2.2e-76 290.0 320 51.6
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 2.2e-76 290.0 318 53.8
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 3.7e-76 289.3 320 51.9
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 8.2e-76 288.1 327 55.4
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 1.1e-75 287.7 318 51.3
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 1.1e-75 287.7 321 53.0
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.0e-74 283.5 322 50.6
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 2.0e-74 283.5 241 65.1
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 2.6e-74 283.1 320 51.9
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.0e-73 281.2 247 62.3
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.0e-73 281.2 317 51.7
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 2.2e-73 280.0 314 50.6
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 2.9e-73 279.6 313 50.5
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 3.8e-73 279.3 324 52.2
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 5.0e-73 278.9 319 53.6
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 3.2e-72 276.2 321 48.3
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 4.2e-72 275.8 319 50.8
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 4.2e-72 275.8 247 61.1
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 1.2e-71 274.2 318 49.4
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 4.6e-71 272.3 322 50.3
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.8e-70 270.4 293 52.2
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 3.9e-70 269.2 315 51.4
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 1.2e-66 257.7 334 48.2
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 1.2e-66 257.7 330 49.1
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 3.4e-66 256.1 320 49.4
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 1.7e-65 253.8 276 52.5
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 2.5e-64 250.0 328 47.9
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 9.4e-64 248.1 215 61.9
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 3.6e-63 246.1 306 51.0
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.8e-62 243.8 341 44.9
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 1.4e-59 234.2 323 47.1
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.5e-58 230.7 227 57.7
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 1.0e-54 218.0 190 63.2
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 3.9e-54 216.1 205 60.5
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.3e-52 211.1 204 58.3
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 2.9e-49 199.9 330 41.2
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 2.1e-47 193.7 317 37.9
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 4.4e-45 186.0 163 65.0
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 5.5e-40 169.1 280 43.9
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 1.2e-39 167.9 188 51.6
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 1.3e-36 157.9 243 43.6
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.7e-26 123.6 110 63.6
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 6.6e-25 119.0 110 61.8
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.3e-17 94.0 88 63.6
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 3.3e-16 90.1 266 29.7
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 7.3e-16 89.0 120 46.7
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 9.8e-13 78.6 67 65.7


User provided reference genes

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