Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 1.1e-203 713.0 346 100.0
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 9.5e-203 709.9 346 99.4
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 3.7e-146 521.9 343 72.9
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 6.2e-146 521.2 346 72.3
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 4.5e-144 515.0 349 71.9
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 7.1e-142 507.7 346 70.8
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 2.7e-141 505.8 348 70.4
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 3.5e-141 505.4 348 70.4
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 2.5e-139 499.2 345 70.4
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 2.5e-139 499.2 346 71.1
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 2.2e-138 496.1 348 70.1
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 3.7e-138 495.4 343 70.8
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 1.1e-137 493.8 343 70.0
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.1e-137 493.8 343 70.6
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 2.4e-137 492.7 346 70.2
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 5.3e-137 491.5 358 69.8
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 6.9e-137 491.1 349 67.9
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 9.0e-137 490.7 349 68.8
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 1.7e-135 486.5 346 69.4
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 8.5e-135 484.2 346 67.1
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 8.5e-135 484.2 346 67.6
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 1.4e-134 483.4 348 68.1
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 1.9e-134 483.0 349 67.0
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 7.2e-134 481.1 356 65.4
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 9.3e-134 480.7 349 68.8
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 1.8e-132 476.5 346 66.8
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 6.7e-132 474.6 353 66.6
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 8.8e-132 474.2 347 67.4
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 1.1e-131 473.8 349 66.8
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 1.9e-131 473.0 345 68.4
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 4.3e-131 471.9 353 67.1
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 4.3e-131 471.9 348 66.7
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 7.4e-131 471.1 350 67.7
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 1.3e-130 470.3 348 65.8
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 2.8e-130 469.2 351 66.1
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 3.7e-130 468.8 353 66.6
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 4.8e-130 468.4 353 66.9
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 8.2e-130 467.6 352 66.8
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 1.1e-129 467.2 352 66.5
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 1.8e-129 466.5 344 66.0
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 5.3e-129 464.9 347 66.9
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 1.2e-128 463.8 346 65.9
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 2.6e-128 462.6 352 66.2
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 5.9e-128 461.5 374 63.1
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 1.0e-127 460.7 346 66.8
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 3.8e-127 458.8 350 64.3
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 8.5e-127 457.6 345 65.2
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.9e-126 456.4 348 64.9
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.2e-125 453.8 352 66.2
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 2.1e-125 453.0 355 65.9
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 2.1e-125 453.0 357 62.7
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 2.1e-125 453.0 398 58.8
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 2.7e-125 452.6 349 64.2
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 2.7e-125 452.6 346 65.9
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.0e-124 450.7 348 64.1
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 1.4e-124 450.3 357 62.5
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 5.1e-124 448.4 355 63.7
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 5.1e-124 448.4 349 64.2
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 2.6e-123 446.0 346 64.7
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 3.3e-123 445.7 381 59.3
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 9.7e-123 444.1 333 66.4
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 3.7e-122 442.2 351 63.0
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 1.4e-121 440.3 351 63.0
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 2.4e-121 439.5 345 61.7
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 2.4e-121 439.5 349 61.3
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 6.9e-121 438.0 354 62.4
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 6.9e-121 438.0 343 66.2
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 9.1e-121 437.6 351 59.3
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 9.1e-121 437.6 351 59.3
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 4.5e-120 435.3 344 62.8
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 5.9e-120 434.9 342 60.2
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 1.0e-119 434.1 346 60.1
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 1.3e-119 433.7 359 62.4
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 1.7e-119 433.3 346 61.3
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 2.2e-119 433.0 347 63.4
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 3.8e-119 432.2 359 59.9
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 1.1e-118 430.6 346 59.8
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 2.5e-118 429.5 346 60.4
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 2.5e-118 429.5 346 60.4
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 2.1e-117 426.4 345 59.7
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 1.0e-116 424.1 346 59.5
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 3.0e-116 422.5 347 59.7
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 3.0e-116 422.5 347 60.8
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 5.9e-112 408.3 346 58.1
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 5.9e-112 408.3 342 60.8
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 7.7e-112 407.9 357 58.5
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 1.7e-111 406.8 355 58.6
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 6.5e-111 404.8 375 55.5
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 4.7e-109 398.7 352 57.1
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 8.2e-106 387.9 309 61.5
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 2.0e-104 383.3 342 59.1
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 1.9e-102 376.7 332 55.1
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 3.2e-102 375.9 341 54.8
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 5.5e-102 375.2 348 56.9
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 3.7e-98 362.5 296 61.8
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 1.8e-97 360.1 276 65.6
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 4.1e-97 359.0 277 65.0
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 7.3e-86 321.6 256 61.3
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 2.6e-83 313.2 371 44.2
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 4.4e-83 312.4 341 51.0
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 8.3e-82 308.1 361 46.3
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 5.4e-81 305.4 352 45.7
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 3.9e-79 299.3 358 45.0
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 6.4e-74 282.0 348 45.4
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.7e-71 273.9 354 39.5
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 2.7e-56 223.4 327 37.6
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.5e-43 181.0 155 60.0
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 5.8e-43 179.1 155 59.4
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 9.9e-43 178.3 243 39.1
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 1.3e-39 167.9 310 35.2
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 1.3e-37 161.4 345 31.0
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 4.8e-37 159.5 135 59.3
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 3.4e-35 153.3 165 49.1
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 7.4e-22 109.0 91 53.8
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 5.0e-18 96.3 260 26.9
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 2.5e-17 94.0 78 64.1
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 1.6e-16 91.3 116 43.1
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 3.6e-16 90.1 110 46.4
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 4.6e-16 89.7 68 61.8
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.9e-15 86.7 79 57.0
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 6.1e-08 62.8 64 53.1
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 7.9e-08 62.4 48 58.3
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 1.5e-06 58.2 110 36.4


User provided reference genes

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