Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.7e-198 696.0 415 100.0
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 7.7e-143 511.1 280 98.6
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 5.6e-117 425.2 303 76.9
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 4.0e-115 419.1 301 73.8
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.6e-111 407.1 304 71.7
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 3.5e-111 406.0 290 75.2
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 2.3e-110 403.3 301 73.1
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 1.5e-109 400.6 303 73.6
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 3.3e-109 399.4 297 71.0
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 2.1e-108 396.7 316 71.8
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 2.1e-108 396.7 301 70.4
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 8.1e-108 394.8 307 70.7
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 1.4e-107 394.0 303 68.6
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.8e-107 393.7 306 70.6
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 1.2e-106 391.0 242 83.5
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 1.5e-106 390.6 302 65.2
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.7e-105 387.1 304 66.4
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 2.2e-105 386.7 301 70.8
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 1.4e-104 384.0 301 65.4
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 1.9e-104 383.6 292 70.9
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 3.2e-104 382.9 253 79.1
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 3.2e-104 382.9 301 65.1
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 5.4e-104 382.1 305 69.8
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 7.1e-104 381.7 301 65.1
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 7.1e-104 381.7 309 68.0
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.2e-103 380.9 328 67.4
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 2.7e-103 379.8 301 69.8
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 3.5e-103 379.4 319 68.0
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 4.6e-103 379.0 301 69.4
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 1.3e-102 377.5 329 66.6
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 1.3e-102 377.5 316 65.2
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 2.3e-102 376.7 301 67.8
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 5.1e-102 375.6 322 68.9
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 8.7e-102 374.8 254 76.4
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 1.9e-101 373.6 303 66.7
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 2.5e-101 373.2 336 64.9
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 3.3e-101 372.9 242 75.6
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 4.3e-101 372.5 316 66.5
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 4.3e-101 372.5 306 69.9
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 4.3e-101 372.5 316 64.6
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 1.6e-100 370.5 292 67.8
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 6.2e-100 368.6 254 72.0
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 6.2e-100 368.6 229 85.2
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 2.4e-99 366.7 243 79.0
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 3.1e-99 366.3 304 66.4
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 3.1e-99 366.3 320 66.6
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 4.0e-99 365.9 304 66.1
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 5.3e-99 365.5 292 66.8
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 1.2e-98 364.4 295 66.1
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 3.4e-98 362.8 290 66.6
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 3.4e-98 362.8 290 66.6
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 4.5e-98 362.5 297 65.7
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 4.5e-98 362.5 304 65.8
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 1.7e-97 360.5 302 64.2
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 3.8e-97 359.4 300 64.7
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 3.8e-97 359.4 259 77.2
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 6.4e-97 358.6 244 76.2
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 1.4e-96 357.5 304 65.1
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.9e-96 357.1 341 60.4
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 5.4e-96 355.5 305 64.3
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 5.4e-96 355.5 307 65.5
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 1.2e-95 354.4 301 65.1
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 1.2e-95 354.4 307 63.5
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 6.0e-95 352.1 252 73.4
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 1.0e-94 351.3 288 66.7
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 3.0e-94 349.7 324 62.3
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 8.7e-94 348.2 237 78.1
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 1.5e-93 347.4 235 76.6
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 2.5e-93 346.7 225 80.9
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 1.3e-92 344.4 337 55.5
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 1.6e-92 344.0 228 78.1
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 7.1e-88 328.6 252 69.4
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 2.3e-86 323.6 245 70.6
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.5e-85 320.1 279 62.0
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 9.0e-83 311.6 265 63.0
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 1.3e-81 307.8 244 69.7
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 1.1e-80 304.7 255 69.4
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 2.5e-80 303.5 230 68.7
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 3.0e-70 270.0 162 82.1
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 1.9e-69 267.3 212 69.3
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 7.9e-63 245.4 165 72.7
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 1.8e-62 244.2 174 71.8
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 1.5e-61 241.1 242 57.4
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 5.7e-61 239.2 243 56.8
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 6.1e-55 219.2 152 77.6
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 1.8e-54 217.6 203 61.6
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 3.9e-54 216.5 157 75.2
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 6.3e-52 209.1 154 76.0
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 1.0e-41 175.3 109 85.3
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 5.0e-41 172.9 183 53.0
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 3.2e-40 170.2 240 37.1
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.5e-32 144.1 84 81.0
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 3.0e-30 137.1 155 45.8
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.2e-26 125.2 74 90.5
CSS0036326 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 5.2e-06 56.6 99 35.4


User provided reference genes

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