Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00482 Eucalyptus grandis HOM05D000343 ORTHO05D009884 1.5e-86 322.8 159 100.0
Eucgr.G00769 Eucalyptus grandis HOM05D000343 ORTHO05D002777 5.2e-31 138.3 225 42.7
Eucgr.L00195 Eucalyptus grandis HOM05D000343 ORTHO05D009884 9.2e-28 127.5 81 79.0
COL.COLO4_24941 Corchorus olitorius HOM05D000343 ORTHO05D009884 5.1e-26 121.7 87 65.5
Prupe.8G060400 Prunus persica HOM05D000343 ORTHO05D002777 5.1e-26 121.7 87 65.5
Migut.B00610 Erythranthe guttata HOM05D000343 ORTHO05D002777 6.6e-26 121.3 87 65.5
CSS0044959 Camellia sinensis var. sinensis HOM05D000343 ORTHO05D002777 8.6e-26 120.9 84 65.5
GSVIVG01038744001 Vitis vinifera HOM05D000343 ORTHO05D009884 1.1e-25 120.6 91 60.4
Cfa005601 Carpinus fangiana HOM05D000343 ORTHO05D002777 3.3e-25 119.0 81 66.7
Hma1.2p1_0704F.1_g206650 Hydrangea macrophylla HOM05D000343 ORTHO05D002777 3.3e-25 119.0 92 62.0
MD10G1051800 Malus domestica HOM05D000343 ORTHO05D009884 5.6e-25 118.2 87 65.5
Duzib132G0085 Durio zibethinus HOM05D000343 ORTHO05D002777 7.3e-25 117.9 87 65.5
PGR042G3206 Punica granatum HOM05D000343 ORTHO05D002777 9.6e-25 117.5 69 72.5
RcHm_v2.0_Chr6g0271811 Rosa chinensis HOM05D000343 ORTHO05D009884 9.6e-25 117.5 87 65.5
TWI59G0918 Tripterygium wilfordii HOM05D000343 ORTHO05D002777 9.6e-25 117.5 84 63.1
Cpa.g.sc42.57 Carica papaya HOM05D000343 ORTHO05D009884 1.2e-24 117.1 82 64.6
Gohir.A03G173900 Gossypium hirsutum HOM05D000343 ORTHO05D002777 1.2e-24 117.1 86 65.1
Gohir.D02G197000 Gossypium hirsutum HOM05D000343 ORTHO05D009884 1.2e-24 117.1 86 65.1
Gorai.005G220100 Gossypium raimondii HOM05D000343 ORTHO05D009884 1.2e-24 117.1 86 65.1
Sabra03G0015100 Salix brachista HOM05D000343 ORTHO05D009884 1.2e-24 117.1 96 58.3
FAN20G2112 Fragaria x ananassa HOM05D000343 ORTHO05D002777 1.6e-24 116.7 81 66.7
Potri.001G205400 Populus trichocarpa HOM05D000343 ORTHO05D002777 1.6e-24 116.7 79 67.1
Thecc.02G138700 Theobroma cacao HOM05D000343 ORTHO05D002777 1.6e-24 116.7 87 64.4
BcaB03g12795 Brassica carinata HOM05D000343 ORTHO05D009884 2.1e-24 116.3 86 62.8
A08p17580 Brassica napus HOM05D000343 ORTHO05D009884 2.1e-24 116.3 85 65.9
BraA08t33711Z Brassica rapa HOM05D000343 ORTHO05D009884 2.1e-24 116.3 85 65.9
FvH4_2g11930 Fragaria vesca HOM05D000343 ORTHO05D002777 2.1e-24 116.3 81 65.4
FAN24G2206 Fragaria x ananassa HOM05D000343 ORTHO05D002777 2.1e-24 116.3 81 65.4
MD05G1044800 Malus domestica HOM05D000343 ORTHO05D009884 2.1e-24 116.3 87 65.5
Atru.chr6.1136 Acer truncatum HOM05D000343 ORTHO05D002777 2.8e-24 115.9 82 65.9
AL7G18020 Arabidopsis lyrata HOM05D000343 ORTHO05D009884 2.8e-24 115.9 70 70.0
AT4G33520 Arabidopsis thaliana HOM05D000343 ORTHO05D002777 2.8e-24 115.9 70 70.0
Carub.0007s0694 Capsella rubella HOM05D000343 ORTHO05D009884 2.8e-24 115.9 70 70.0
BcaC09g52169 Brassica carinata HOM05D000343 ORTHO05D002777 3.6e-24 115.5 70 70.0
A01p04740 Brassica napus HOM05D000343 ORTHO05D002777 3.6e-24 115.5 85 65.9
Sp7g31260 Schrenkiella parvula HOM05D000343 ORTHO05D002777 3.6e-24 115.5 70 70.0
TAR628G1020 Trochodendron aralioides HOM05D000343 ORTHO05D002777 6.2e-24 114.8 79 64.6
vmacro01824 Vaccinium macrocarpon HOM05D000343 ORTHO05D002777 6.2e-24 114.8 79 65.8
Actinidia00268 Actinidia chinensis HOM05D000343 ORTHO05D002777 8.1e-24 114.4 79 65.8
CANSAT11G1697 Cannabis sativa HOM05D000343 ORTHO05D002777 8.1e-24 114.4 87 63.2
CARHR241620 Cardamine hirsuta HOM05D000343 ORTHO05D009884 8.1e-24 114.4 83 62.7
Ciclev10030175m.g Citrus clementina HOM05D000343 ORTHO05D009884 8.1e-24 114.4 69 71.0
THA.LOC104804410 Tarenaya hassleriana HOM05D000343 ORTHO05D002777 8.1e-24 114.4 88 60.2
BolC1t00495H Brassica oleracea HOM05D000343 ORTHO05D002777 1.4e-23 113.6 85 64.7
BraA01t00457Z Brassica rapa HOM05D000343 ORTHO05D002777 1.4e-23 113.6 85 64.7
Manes.06G012600 Manihot esculenta HOM05D000343 ORTHO05D002777 1.4e-23 113.6 79 64.6
Solyc01g105160.4 Solanum lycopersicum HOM05D000343 ORTHO05D002777 1.4e-23 113.6 69 69.6
Sopen01g047700 Solanum pennellii HOM05D000343 ORTHO05D009884 1.4e-23 113.6 69 69.6
PGSC0003DMG400012559 Solanum tuberosum HOM05D000343 ORTHO05D009884 1.4e-23 113.6 69 69.6
Actinidia23995 Actinidia chinensis HOM05D000343 ORTHO05D002777 1.8e-23 113.2 79 65.8
BcaC01g00987 Brassica carinata HOM05D000343 ORTHO05D009884 1.8e-23 113.2 85 64.7
C03p86570 Brassica napus HOM05D000343 ORTHO05D009884 1.8e-23 113.2 85 64.7
BolC3t20951H Brassica oleracea HOM05D000343 ORTHO05D009884 1.8e-23 113.2 85 64.7
FAN27G2388 Fragaria x ananassa HOM05D000343 ORTHO05D002777 1.8e-23 113.2 67 74.6
CiPaw.06G153500 Carya illinoinensis HOM05D000343 ORTHO05D002777 2.4e-23 112.8 84 60.7
Nitab4.5_0002576g0010 Nicotiana tabacum HOM05D000343 ORTHO05D002777 2.4e-23 112.8 86 59.3
Ah.01g022360 Amaranthus hybridus HOM05D000343 ORTHO05D002777 3.1e-23 112.5 91 58.2
Cc02_g21540 Coffea canephora HOM05D000343 ORTHO05D009884 3.1e-23 112.5 87 60.9
Oeu000247.4 Olea europaea HOM05D000343 ORTHO05D002777 3.1e-23 112.5 85 63.5
arahy.Tifrunner.gnm1.ann1.KT5IG2 Arachis hypogaea HOM05D000343 ORTHO05D002777 4.0e-23 112.1 79 64.6
EL10Ac9g21477 Beta vulgaris HOM05D000343 ORTHO05D002777 4.0e-23 112.1 79 64.6
Duzib248G1573 Durio zibethinus HOM05D000343 ORTHO05D009884 4.0e-23 112.1 69 69.6
FAN15G3294 Fragaria x ananassa HOM05D000343 ORTHO05D002777 4.0e-23 112.1 81 64.2
Nn1g05348 Nelumbo nucifera HOM05D000343 ORTHO05D009884 4.0e-23 112.1 69 71.0
QL11p020880 Quercus lobata HOM05D000343 ORTHO05D009884 4.0e-23 112.1 87 62.1
TPR.G10457 Trifolium pratense HOM05D000343 ORTHO05D002777 4.0e-23 112.1 78 65.4
MSTRG.16584 Avicennia marina HOM05D000343 ORTHO05D009884 5.2e-23 111.7 69 69.6
Ca_18353_v3 Cicer arietinum L. HOM05D000343 ORTHO05D002777 5.2e-23 111.7 78 64.1
DCAR_001785 Daucus carota HOM05D000343 ORTHO05D009884 5.2e-23 111.7 69 68.1
Lsat_1_v5_gn_9_117160 Lactuca sativa HOM05D000343 ORTHO05D002777 5.2e-23 111.7 67 76.1
Medtr4g094232 Medicago truncatula HOM05D000343 ORTHO05D002777 5.2e-23 111.7 78 65.4
SalBow5G0636 Salvia bowleyana HOM05D000343 ORTHO05D009884 5.2e-23 111.7 69 69.6
SalBow5G2302 Salvia bowleyana HOM05D000343 ORTHO05D009884 5.2e-23 111.7 69 69.6
VMungo0251G0418 Vigna mungo HOM05D000343 ORTHO05D009884 5.2e-23 111.7 79 62.0
Glyma.08G072400 Glycine max HOM05D000343 ORTHO05D002777 6.8e-23 111.3 79 63.3
Lj9A353G63 Lonicera japonica HOM05D000343 ORTHO05D002777 8.9e-23 110.9 71 66.2
Lalb_Chr10g0097841 Lupinus albus HOM05D000343 ORTHO05D002777 8.9e-23 110.9 69 69.6
Eucgr.L00219 Eucalyptus grandis HOM05D000343 ORTHO05D009884 1.2e-22 110.5 76 71.1
Lalb_Chr04g0256521 Lupinus albus HOM05D000343 ORTHO05D009884 1.2e-22 110.5 79 62.0
arahy.Tifrunner.gnm1.ann1.8T0CRQ Arachis hypogaea HOM05D000343 ORTHO05D002777 1.5e-22 110.2 79 63.3
CiPaw.05G035500 Carya illinoinensis HOM05D000343 ORTHO05D009884 1.5e-22 110.2 88 61.4
Aa31sc280G30 Aethionema arabicum HOM05D000343 ORTHO05D002777 2.0e-22 109.8 70 65.7
Nn5g30120 Nelumbo nucifera HOM05D000343 ORTHO05D002777 2.0e-22 109.8 78 62.8
Sc22g0003160 Simmondsia chinensis HOM05D000343 ORTHO05D002777 2.0e-22 109.8 77 66.2
AUR62010134 Chenopodium quinoa HOM05D000343 ORTHO05D002777 2.6e-22 109.4 78 62.8
Glyma.05G117300 Glycine max HOM05D000343 ORTHO05D009884 2.6e-22 109.4 79 62.0
Lj4g0019087 Lotus japonicus HOM05D000343 ORTHO05D002777 2.6e-22 109.4 79 62.0
Phvul.002G208800 Phaseolus vulgaris HOM05D000343 ORTHO05D002777 2.6e-22 109.4 79 62.0
SGA_v2.0_scaffold14G07121 Striga asiatica HOM05D000343 ORTHO05D002777 2.6e-22 109.4 90 58.9
unitig_749.g14153 Utricularia gibba HOM05D000343 ORTHO05D009884 2.6e-22 109.4 69 66.7
CAN.G523.72 Capsicum annuum HOM05D000343 ORTHO05D002777 3.4e-22 109.0 69 69.6
ECA240G1089 Erigeron canadensis HOM05D000343 ORTHO05D002777 3.4e-22 109.0 69 71.0
C01p05150 Brassica napus HOM05D000343 ORTHO05D002777 4.4e-22 108.6 85 63.5
Hund00062 Selenicereus undatus HOM05D000343 ORTHO05D002777 4.4e-22 108.6 79 60.8
AUR62013126 Chenopodium quinoa HOM05D000343 ORTHO05D002777 5.8e-22 108.2 78 60.3
Sed0012395 Sechium edule HOM05D000343 ORTHO05D002777 5.8e-22 108.2 79 62.0
Aqoxy6G00797 Aquilegia oxysepala HOM05D000343 ORTHO05D002777 7.6e-22 107.8 79 60.8
HanXRQChr03g0066901 Helianthus annuus HOM05D000343 ORTHO05D002777 9.9e-22 107.5 81 63.0
Oeu007963.1 Olea europaea HOM05D000343 ORTHO05D009884 1.7e-21 106.7 69 66.7
Eucgr.L00476 Eucalyptus grandis HOM05D000343 ORTHO05D009884 3.8e-21 105.5 67 67.2
Oeu036419.1 Olea europaea HOM05D000343 ORTHO05D009884 6.4e-21 104.8 69 63.8
PSO781G0273 Papaver somniferum HOM05D000343 ORTHO05D002777 6.4e-21 104.8 79 59.5
Potri.003G024000 Populus trichocarpa HOM05D000343 ORTHO05D002777 8.4e-21 104.4 96 54.2
Rhsim11G0136600 Rhododendron simsii HOM05D000343 ORTHO05D002777 8.4e-21 104.4 97 54.6
Eucgr.L00173 Eucalyptus grandis HOM05D000343 ORTHO05D009884 1.9e-20 103.2 73 68.5
HanXRQChr13g0420711 Helianthus annuus HOM05D000343 ORTHO05D009884 1.9e-20 103.2 69 66.7
TAR376G1172 Trochodendron aralioides HOM05D000343 ORTHO05D009884 2.4e-20 102.8 79 59.5
MELO3C019011.2 Cucumis melo HOM05D000343 ORTHO05D002777 5.4e-20 101.7 79 59.5
CsaV3_4G009440 Cucumis sativus L. HOM05D000343 ORTHO05D002777 7.1e-20 101.3 69 65.2
MBI02_g08720_MAGBIO Magnolia biondii HOM05D000343 ORTHO05D002777 7.1e-20 101.3 77 59.7
PSO541G1663 Papaver somniferum HOM05D000343 ORTHO05D002777 9.3e-20 100.9 79 58.2
Gohir.A04G113600 Gossypium hirsutum HOM05D000343 ORTHO05D009884 2.1e-19 99.8 78 57.7
Gorai.012G142100 Gossypium raimondii HOM05D000343 ORTHO05D009884 2.1e-19 99.8 78 57.7
MELO3C018643.2 Cucumis melo HOM05D000343 ORTHO05D009884 2.7e-19 99.4 70 62.9
Gohir.D04G154900 Gossypium hirsutum HOM05D000343 ORTHO05D009884 2.7e-19 99.4 78 57.7
PSO210G0964 Papaver somniferum HOM05D000343 ORTHO05D009884 2.7e-19 99.4 162 40.1
ATR0118G027 Amborella trichopoda HOM05D000343 ORTHO05D002777 3.5e-19 99.0 69 60.9
ClCG09G015420 Citrullus lanatus HOM05D000343 ORTHO05D009884 3.5e-19 99.0 66 66.7
ClCG10G009250 Citrullus lanatus HOM05D000343 ORTHO05D002777 4.6e-19 98.6 79 58.2
CsaV3_7G006490 Cucumis sativus L. HOM05D000343 ORTHO05D009884 6.0e-19 98.2 66 66.7
Sed0024706 Sechium edule HOM05D000343 ORTHO05D009884 7.8e-19 97.8 67 62.7
PSO447G0128 Papaver somniferum HOM05D000343 ORTHO05D009884 3.0e-18 95.9 83 55.4
Hund06383 Selenicereus undatus HOM05D000343 ORTHO05D009884 3.9e-18 95.5 88 53.4
Lsat_1_v5_gn_7_80921 Lactuca sativa HOM05D000343 ORTHO05D009884 5.1e-18 95.1 86 54.7
ECA236G2887 Erigeron canadensis HOM05D000343 ORTHO05D009884 6.6e-18 94.7 157 38.9
CDE10G0761 Ceratophyllum demersum HOM05D000343 ORTHO05D009884 1.1e-17 94.0 67 61.2
HPP92_002330 Vanilla planifolia HOM05D000343 ORTHO05D002777 1.5e-17 93.6 86 53.5
CDE12G0847 Ceratophyllum demersum HOM05D000343 ORTHO05D002777 1.9e-17 93.2 69 58.0
Eucgr.G00674 Eucalyptus grandis HOM05D000343 ORTHO05D009884 1.9e-17 93.2 61 70.5
HanXRQChr11g0338131 Helianthus annuus HOM05D000343 ORTHO05D009884 2.5e-17 92.8 105 47.6
Lj6g0025417 Lotus japonicus HOM05D000343 ORTHO05D009884 2.5e-17 92.8 111 46.8
Zm00001eb392420 Zea mays HOM05D000343 ORTHO05D009884 3.3e-17 92.4 69 58.0
arahy.Tifrunner.gnm1.ann1.3SZ8AD Arachis hypogaea HOM05D000343 ORTHO05D009884 4.3e-17 92.0 109 44.0
Zm00001eb199150 Zea mays HOM05D000343 ORTHO05D002777 4.3e-17 92.0 94 46.8
arahy.Tifrunner.gnm1.ann1.HQ4SC1 Arachis hypogaea HOM05D000343 ORTHO05D009884 7.3e-17 91.3 109 44.0
Ca_00135_v3 Cicer arietinum L. HOM05D000343 ORTHO05D009884 2.1e-16 89.7 96 51.0
Thhalv10024339m.g Eutrema salsugineum HOM05D000343 ORTHO05D002777 2.8e-16 89.4 55 70.9
MBI05_g19354_MAGBIO Magnolia biondii HOM05D000343 ORTHO05D009884 2.8e-16 89.4 118 44.1
Peaxi162Scf00001g00124 Petunia axillaris HOM05D000343 ORTHO05D009884 2.8e-16 89.4 62 64.5
Os03g0388100 Oryza sativa ssp. japonica HOM05D000343 ORTHO05D009884 3.6e-16 89.0 69 52.2
CSS0022587 Camellia sinensis var. sinensis HOM05D000343 ORTHO05D009884 4.8e-16 88.6 49 77.6
Psat1g216600 Pisum sativum HOM05D000343 ORTHO05D009884 1.1e-15 87.4 100 48.0
TPR.G25247 Trifolium pratense HOM05D000343 ORTHO05D009884 1.1e-15 87.4 107 46.7
Eucgr.L00481 Eucalyptus grandis HOM05D000343 ORTHO05D009884 1.4e-15 87.0 85 56.5
Mapoly0071s0034 Marchantia polymorpha HOM05D000343 ORTHO05D002777 7.6e-14 81.3 71 52.1
Glyma.15G053500 Glycine max HOM05D000343 ORTHO05D009884 1.7e-13 80.1 96 46.9
Zm00001eb327860 Zea mays HOM05D000343 ORTHO05D009884 1.7e-13 80.1 161 33.5
HPP92_019306 Vanilla planifolia HOM05D000343 ORTHO05D009884 2.2e-13 79.7 68 52.9
arahy.Tifrunner.gnm1.ann1.A40AQH Arachis hypogaea HOM05D000343 ORTHO05D002777 2.9e-13 79.3 54 66.7
Pp3c22_10860 Physcomitrium patens HOM05D000343 ORTHO05D002777 2.9e-13 79.3 91 46.2
VMungo0540G1553 Vigna mungo HOM05D004368 ORTHO05D004990 4.9e-13 78.6 68 52.9
AagrBONN_evm.TU.Sc2ySwM_117.4043 Anthoceros agrestis HOM05D000208 ORTHO05D000130 8.4e-13 77.8 71 53.5
Eucgr.G00759 Eucalyptus grandis HOM05D000343 ORTHO05D009884 1.4e-12 77.0 54 72.2
Eucgr.L00310 Eucalyptus grandis HOM05D000343 ORTHO05D009884 1.4e-12 77.0 54 72.2
Glyma.08G179000 Glycine max HOM05D000343 ORTHO05D009884 1.9e-12 76.6 96 46.9
Os07g0623200 Oryza sativa ssp. japonica HOM05D000343 ORTHO05D009884 1.9e-12 76.6 66 50.0
Eucgr.L00192 Eucalyptus grandis HOM05D000343 ORTHO05D009884 4.2e-12 75.5 50 76.0
Pp3c18_10710 Physcomitrium patens HOM05D000343 ORTHO05D002777 5.4e-12 75.1 89 43.8
CBR_g20392 Chara braunii HOM05D000343 ORTHO05D002777 1.2e-11 73.9 73 49.3
Phvul.006G206500 Phaseolus vulgaris HOM05D004368 ORTHO05D004990 1.2e-11 73.9 112 42.0
Medtr7g116990 Medicago truncatula HOM05D000343 ORTHO05D009884 1.6e-11 73.6 69 50.7
Eucgr.G00664 Eucalyptus grandis HOM05D000343 ORTHO05D009884 2.7e-11 72.8 54 68.5
Peaxi162Scf00152g01020 Petunia axillaris HOM05D000343 ORTHO05D009884 4.6e-11 72.0 80 52.5
SMO011G0027 Selaginella moellendorffii HOM05D000343 ORTHO05D002777 4.6e-11 72.0 69 47.8
CDE05G0554 Ceratophyllum demersum HOM05D000391 ORTHO05D000293 7.9e-11 71.2 163 31.9
Pp3c19_14990 Physcomitrium patens HOM05D000343 ORTHO05D009884 6.6e-10 68.2 69 46.4
Lalb_Chr18g0060571 Lupinus albus HOM05D000343 ORTHO05D009884 8.7e-10 67.8 93 46.2
Lsat_1_v5_gn_5_133740 Lactuca sativa HOM05D000912 ORTHO05D021086 3.1e-07 59.3 33 75.8
SEGI_22608 Sequoiadendron giganteum HOM05D000343 ORTHO05D002777 3.1e-07 59.3 50 54.0
Cpa.g.sc126.19 Carica papaya HOM05D000343 ORTHO05D002777 2.6e-06 56.2 94 37.2
THA.LOC104810955 Tarenaya hassleriana HOM05D000343 ORTHO05D002777 4.5e-06 55.5 90 37.8
Eucgr.G00666 Eucalyptus grandis HOM05D029851 ORTHO05D029320 7.6e-06 54.7 140 34.3
Eucgr.L00174 Eucalyptus grandis HOM05D029851 ORTHO05D029320 7.6e-06 54.7 140 34.3


User provided reference genes

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