Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00192 Eucalyptus grandis HOM05D000343 ORTHO05D009884 6.1e-97 357.5 178 100.0
Eucgr.L00219 Eucalyptus grandis HOM05D000343 ORTHO05D009884 9.1e-16 87.8 49 89.8
Eucgr.L00481 Eucalyptus grandis HOM05D000343 ORTHO05D009884 1.2e-15 87.4 57 75.4
Eucgr.L00173 Eucalyptus grandis HOM05D000343 ORTHO05D009884 2.9e-14 82.8 45 93.3
Eucgr.G00674 Eucalyptus grandis HOM05D000343 ORTHO05D009884 6.5e-14 81.6 52 78.8
Eucgr.G00769 Eucalyptus grandis HOM05D000343 ORTHO05D002777 5.5e-13 78.6 52 75.0
MD10G1051800 Malus domestica HOM05D000343 ORTHO05D009884 5.5e-13 78.6 52 75.0
Gohir.A03G173900 Gossypium hirsutum HOM05D000343 ORTHO05D002777 9.4e-13 77.8 52 73.1
Gohir.D02G197000 Gossypium hirsutum HOM05D000343 ORTHO05D009884 9.4e-13 77.8 52 73.1
Gorai.005G220100 Gossypium raimondii HOM05D000343 ORTHO05D009884 9.4e-13 77.8 52 73.1
PGR042G3206 Punica granatum HOM05D000343 ORTHO05D002777 9.4e-13 77.8 52 71.2
Atru.chr6.1136 Acer truncatum HOM05D000343 ORTHO05D002777 1.6e-12 77.0 52 73.1
Eucgr.L00482 Eucalyptus grandis HOM05D000343 ORTHO05D009884 2.1e-12 76.6 50 76.0
MD05G1044800 Malus domestica HOM05D000343 ORTHO05D009884 2.1e-12 76.6 52 73.1
CSS0044959 Camellia sinensis var. sinensis HOM05D000343 ORTHO05D002777 3.6e-12 75.9 52 71.2
Cpa.g.sc42.57 Carica papaya HOM05D000343 ORTHO05D009884 3.6e-12 75.9 52 71.2
Duzib132G0085 Durio zibethinus HOM05D000343 ORTHO05D002777 3.6e-12 75.9 52 71.2
COL.COLO4_24941 Corchorus olitorius HOM05D000343 ORTHO05D009884 4.7e-12 75.5 52 69.2
CANSAT11G1697 Cannabis sativa HOM05D000343 ORTHO05D002777 6.1e-12 75.1 52 69.2
Nitab4.5_0002576g0010 Nicotiana tabacum HOM05D000343 ORTHO05D002777 6.1e-12 75.1 52 69.2
Actinidia00268 Actinidia chinensis HOM05D000343 ORTHO05D002777 8.0e-12 74.7 52 69.2
Cfa005601 Carpinus fangiana HOM05D000343 ORTHO05D002777 8.0e-12 74.7 52 69.2
Manes.06G012600 Manihot esculenta HOM05D000343 ORTHO05D002777 8.0e-12 74.7 52 69.2
Prupe.8G060400 Prunus persica HOM05D000343 ORTHO05D002777 8.0e-12 74.7 52 69.2
arahy.Tifrunner.gnm1.ann1.KT5IG2 Arachis hypogaea HOM05D000343 ORTHO05D002777 1.0e-11 74.3 52 69.2
Ciclev10030175m.g Citrus clementina HOM05D000343 ORTHO05D009884 1.0e-11 74.3 52 69.2
Eucgr.G00759 Eucalyptus grandis HOM05D000343 ORTHO05D009884 1.0e-11 74.3 39 92.3
Eucgr.L00310 Eucalyptus grandis HOM05D000343 ORTHO05D009884 1.0e-11 74.3 39 92.3
TWI59G0918 Tripterygium wilfordii HOM05D000343 ORTHO05D002777 1.0e-11 74.3 52 69.2
GSVIVG01038744001 Vitis vinifera HOM05D000343 ORTHO05D009884 1.0e-11 74.3 52 69.2
CAN.G523.72 Capsicum annuum HOM05D000343 ORTHO05D002777 1.4e-11 73.9 52 67.3
Ca_18353_v3 Cicer arietinum L. HOM05D000343 ORTHO05D002777 1.4e-11 73.9 52 69.2
Glyma.08G072400 Glycine max HOM05D000343 ORTHO05D002777 1.4e-11 73.9 52 69.2
Lsat_1_v5_gn_9_117160 Lactuca sativa HOM05D000343 ORTHO05D002777 1.4e-11 73.9 46 80.4
Lj9A353G63 Lonicera japonica HOM05D000343 ORTHO05D002777 1.4e-11 73.9 50 70.0
Potri.001G205400 Populus trichocarpa HOM05D000343 ORTHO05D002777 1.4e-11 73.9 52 69.2
Sabra03G0015100 Salix brachista HOM05D000343 ORTHO05D009884 1.4e-11 73.9 52 69.2
SalBow5G0636 Salvia bowleyana HOM05D000343 ORTHO05D009884 1.4e-11 73.9 52 69.2
SalBow5G2302 Salvia bowleyana HOM05D000343 ORTHO05D009884 1.4e-11 73.9 52 69.2
Solyc01g105160.4 Solanum lycopersicum HOM05D000343 ORTHO05D002777 1.4e-11 73.9 52 67.3
Sopen01g047700 Solanum pennellii HOM05D000343 ORTHO05D009884 1.4e-11 73.9 52 67.3
PGSC0003DMG400012559 Solanum tuberosum HOM05D000343 ORTHO05D009884 1.4e-11 73.9 52 67.3
Migut.B00610 Erythranthe guttata HOM05D000343 ORTHO05D002777 1.8e-11 73.6 52 69.2
Phvul.002G208800 Phaseolus vulgaris HOM05D000343 ORTHO05D002777 1.8e-11 73.6 52 67.3
VMungo0251G0418 Vigna mungo HOM05D000343 ORTHO05D009884 1.8e-11 73.6 52 67.3
Duzib248G1573 Durio zibethinus HOM05D000343 ORTHO05D009884 2.3e-11 73.2 52 67.3
Eucgr.G00664 Eucalyptus grandis HOM05D000343 ORTHO05D009884 2.3e-11 73.2 39 89.7
FvH4_2g11930 Fragaria vesca HOM05D000343 ORTHO05D002777 3.0e-11 72.8 52 69.2
FAN15G3294 Fragaria x ananassa HOM05D000343 ORTHO05D002777 3.0e-11 72.8 52 69.2
FAN20G2112 Fragaria x ananassa HOM05D000343 ORTHO05D002777 3.0e-11 72.8 52 69.2
FAN24G2206 Fragaria x ananassa HOM05D000343 ORTHO05D002777 3.0e-11 72.8 52 69.2
Hma1.2p1_0704F.1_g206650 Hydrangea macrophylla HOM05D000343 ORTHO05D002777 3.0e-11 72.8 52 69.2
Lalb_Chr04g0256521 Lupinus albus HOM05D000343 ORTHO05D009884 3.0e-11 72.8 52 67.3
Lalb_Chr10g0097841 Lupinus albus HOM05D000343 ORTHO05D002777 3.0e-11 72.8 52 67.3
TPR.G10457 Trifolium pratense HOM05D000343 ORTHO05D002777 3.0e-11 72.8 52 69.2
arahy.Tifrunner.gnm1.ann1.8T0CRQ Arachis hypogaea HOM05D000343 ORTHO05D002777 3.9e-11 72.4 52 67.3
Medtr4g094232 Medicago truncatula HOM05D000343 ORTHO05D002777 3.9e-11 72.4 52 69.2
RcHm_v2.0_Chr6g0271811 Rosa chinensis HOM05D000343 ORTHO05D009884 3.9e-11 72.4 52 67.3
SGA_v2.0_scaffold14G07121 Striga asiatica HOM05D000343 ORTHO05D002777 3.9e-11 72.4 58 62.1
THA.LOC104804410 Tarenaya hassleriana HOM05D000343 ORTHO05D002777 3.9e-11 72.4 52 67.3
Glyma.05G117300 Glycine max HOM05D000343 ORTHO05D009884 5.2e-11 72.0 52 67.3
Lj4g0019087 Lotus japonicus HOM05D000343 ORTHO05D002777 5.2e-11 72.0 52 65.4
Hund00062 Selenicereus undatus HOM05D000343 ORTHO05D002777 5.2e-11 72.0 52 65.4
vmacro01824 Vaccinium macrocarpon HOM05D000343 ORTHO05D002777 5.2e-11 72.0 52 67.3
Cc02_g21540 Coffea canephora HOM05D000343 ORTHO05D009884 6.7e-11 71.6 52 67.3
QL11p020880 Quercus lobata HOM05D000343 ORTHO05D009884 6.7e-11 71.6 52 67.3
Sed0012395 Sechium edule HOM05D000343 ORTHO05D002777 6.7e-11 71.6 52 65.4
Thecc.02G138700 Theobroma cacao HOM05D000343 ORTHO05D002777 6.7e-11 71.6 52 67.3
Aa31sc280G30 Aethionema arabicum HOM05D000343 ORTHO05D002777 8.8e-11 71.2 52 63.5
DCAR_001785 Daucus carota HOM05D000343 ORTHO05D009884 8.8e-11 71.2 52 63.5
ECA240G1089 Erigeron canadensis HOM05D000343 ORTHO05D002777 8.8e-11 71.2 52 67.3
HanXRQChr03g0066901 Helianthus annuus HOM05D000343 ORTHO05D002777 8.8e-11 71.2 52 67.3
MSTRG.16584 Avicennia marina HOM05D000343 ORTHO05D009884 1.1e-10 70.9 52 67.3
FAN27G2388 Fragaria x ananassa HOM05D000343 ORTHO05D002777 1.1e-10 70.9 52 69.2
Actinidia23995 Actinidia chinensis HOM05D000343 ORTHO05D002777 1.5e-10 70.5 52 65.4
EL10Ac9g21477 Beta vulgaris HOM05D000343 ORTHO05D002777 1.5e-10 70.5 52 65.4
Ah.01g022360 Amaranthus hybridus HOM05D000343 ORTHO05D002777 2.0e-10 70.1 52 65.4
CiPaw.05G035500 Carya illinoinensis HOM05D000343 ORTHO05D009884 2.0e-10 70.1 52 67.3
ClCG10G009250 Citrullus lanatus HOM05D000343 ORTHO05D002777 2.0e-10 70.1 52 63.5
MELO3C019011.2 Cucumis melo HOM05D000343 ORTHO05D002777 2.0e-10 70.1 52 63.5
CsaV3_4G009440 Cucumis sativus L. HOM05D000343 ORTHO05D002777 2.0e-10 70.1 52 63.5
Rhsim11G0136600 Rhododendron simsii HOM05D000343 ORTHO05D002777 2.0e-10 70.1 70 54.3
AUR62010134 Chenopodium quinoa HOM05D000343 ORTHO05D002777 2.6e-10 69.7 52 65.4
CARHR241620 Cardamine hirsuta HOM05D000343 ORTHO05D009884 3.3e-10 69.3 52 61.5
CiPaw.06G153500 Carya illinoinensis HOM05D000343 ORTHO05D002777 3.3e-10 69.3 52 65.4
Oeu000247.4 Olea europaea HOM05D000343 ORTHO05D002777 3.3e-10 69.3 52 65.4
AL7G18020 Arabidopsis lyrata HOM05D000343 ORTHO05D009884 4.4e-10 68.9 52 61.5
AT4G33520 Arabidopsis thaliana HOM05D000343 ORTHO05D002777 4.4e-10 68.9 52 61.5
BcaC09g52169 Brassica carinata HOM05D000343 ORTHO05D002777 4.4e-10 68.9 52 61.5
Carub.0007s0694 Capsella rubella HOM05D000343 ORTHO05D009884 4.4e-10 68.9 52 61.5
Sc22g0003160 Simmondsia chinensis HOM05D000343 ORTHO05D002777 4.4e-10 68.9 52 65.4
BcaB03g12795 Brassica carinata HOM05D000343 ORTHO05D009884 5.7e-10 68.6 52 59.6
A01p04740 Brassica napus HOM05D000343 ORTHO05D002777 5.7e-10 68.6 52 61.5
C01p05150 Brassica napus HOM05D000343 ORTHO05D002777 5.7e-10 68.6 52 61.5
BolC1t00495H Brassica oleracea HOM05D000343 ORTHO05D002777 5.7e-10 68.6 52 61.5
BraA01t00457Z Brassica rapa HOM05D000343 ORTHO05D002777 5.7e-10 68.6 52 61.5
AUR62013126 Chenopodium quinoa HOM05D000343 ORTHO05D002777 5.7e-10 68.6 52 61.5
Aqoxy6G00797 Aquilegia oxysepala HOM05D000343 ORTHO05D002777 7.4e-10 68.2 52 63.5
A08p17580 Brassica napus HOM05D000343 ORTHO05D009884 7.4e-10 68.2 52 59.6
BraA08t33711Z Brassica rapa HOM05D000343 ORTHO05D009884 7.4e-10 68.2 52 59.6
TAR628G1020 Trochodendron aralioides HOM05D000343 ORTHO05D002777 7.4e-10 68.2 52 61.5
Sp7g31260 Schrenkiella parvula HOM05D000343 ORTHO05D002777 9.7e-10 67.8 52 59.6
unitig_749.g14153 Utricularia gibba HOM05D000343 ORTHO05D009884 9.7e-10 67.8 52 63.5
ECA236G2887 Erigeron canadensis HOM05D000343 ORTHO05D009884 1.3e-09 67.4 52 61.5
Eucgr.L00195 Eucalyptus grandis HOM05D000343 ORTHO05D009884 1.3e-09 67.4 58 63.8
Nn5g30120 Nelumbo nucifera HOM05D000343 ORTHO05D002777 1.3e-09 67.4 52 63.5
Oeu007963.1 Olea europaea HOM05D000343 ORTHO05D009884 1.3e-09 67.4 46 71.7
Oeu036419.1 Olea europaea HOM05D000343 ORTHO05D009884 1.3e-09 67.4 46 69.6
HanXRQChr13g0420711 Helianthus annuus HOM05D000343 ORTHO05D009884 2.8e-09 66.2 52 61.5
Potri.003G024000 Populus trichocarpa HOM05D000343 ORTHO05D002777 3.7e-09 65.9 52 65.4
Gohir.A04G113600 Gossypium hirsutum HOM05D000343 ORTHO05D009884 4.8e-09 65.5 52 59.6
Gohir.D04G154900 Gossypium hirsutum HOM05D000343 ORTHO05D009884 4.8e-09 65.5 52 59.6
Gorai.012G142100 Gossypium raimondii HOM05D000343 ORTHO05D009884 4.8e-09 65.5 52 59.6
Nn1g05348 Nelumbo nucifera HOM05D000343 ORTHO05D009884 4.8e-09 65.5 46 69.6
ClCG09G015420 Citrullus lanatus HOM05D000343 ORTHO05D009884 6.3e-09 65.1 52 61.5
BcaC01g00987 Brassica carinata HOM05D000343 ORTHO05D009884 8.2e-09 64.7 50 60.0
C03p86570 Brassica napus HOM05D000343 ORTHO05D009884 8.2e-09 64.7 50 60.0
BolC3t20951H Brassica oleracea HOM05D000343 ORTHO05D009884 8.2e-09 64.7 50 60.0
CsaV3_7G006490 Cucumis sativus L. HOM05D000343 ORTHO05D009884 8.2e-09 64.7 52 61.5
MBI02_g08720_MAGBIO Magnolia biondii HOM05D000343 ORTHO05D002777 2.4e-08 63.2 52 57.7
CDE12G0847 Ceratophyllum demersum HOM05D000343 ORTHO05D002777 3.1e-08 62.8 52 57.7
MELO3C018643.2 Cucumis melo HOM05D000343 ORTHO05D009884 3.1e-08 62.8 52 61.5
PSO781G0273 Papaver somniferum HOM05D000343 ORTHO05D002777 3.1e-08 62.8 153 33.3
PSO541G1663 Papaver somniferum HOM05D000343 ORTHO05D002777 5.3e-08 62.0 52 57.7
TAR376G1172 Trochodendron aralioides HOM05D000343 ORTHO05D009884 5.3e-08 62.0 48 62.5
Lsat_1_v5_gn_7_80921 Lactuca sativa HOM05D000343 ORTHO05D009884 1.2e-07 60.8 52 57.7
Sed0024706 Sechium edule HOM05D000343 ORTHO05D009884 2.0e-07 60.1 52 53.8
HanXRQChr11g0338131 Helianthus annuus HOM05D000343 ORTHO05D009884 2.6e-07 59.7 51 58.8
HPP92_002330 Vanilla planifolia HOM05D000343 ORTHO05D002777 4.5e-07 58.9 52 55.8
CDE10G0761 Ceratophyllum demersum HOM05D000343 ORTHO05D009884 7.7e-07 58.2 52 53.8
Hund06383 Selenicereus undatus HOM05D000343 ORTHO05D009884 1.0e-06 57.8 46 60.9
ATR0118G027 Amborella trichopoda HOM05D000343 ORTHO05D002777 1.3e-06 57.4 52 51.9
Eucgr.L00476 Eucalyptus grandis HOM05D000343 ORTHO05D009884 1.7e-06 57.0 43 62.8


User provided reference genes

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