Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 1.0e-197 693.3 376 100.0
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 6.3e-144 514.6 392 71.7
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 2.6e-137 492.7 328 79.0
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 8.3e-136 487.6 388 69.8
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 1.6e-134 483.4 341 73.9
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 1.0e-133 480.7 387 68.5
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 1.5e-132 476.9 361 73.7
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.5e-132 476.9 345 72.8
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 7.3e-132 474.6 337 73.9
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 1.6e-131 473.4 384 68.5
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 1.6e-131 473.4 338 74.6
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 2.1e-131 473.0 330 76.4
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 2.1e-131 473.0 330 74.8
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 2.8e-131 472.6 348 73.3
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 8.1e-131 471.1 321 76.6
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 5.2e-130 468.4 397 66.2
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 6.8e-130 468.0 324 77.5
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 2.6e-129 466.1 324 75.9
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 5.8e-129 464.9 331 74.6
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 5.8e-129 464.9 324 75.9
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 7.5e-129 464.5 340 72.4
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 9.8e-129 464.2 386 66.8
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 9.8e-129 464.2 386 66.8
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 1.7e-128 463.4 338 73.1
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 1.7e-128 463.4 320 76.6
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 2.2e-128 463.0 320 76.6
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 4.9e-128 461.8 318 77.4
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 8.3e-128 461.1 335 73.7
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 1.1e-127 460.7 331 74.3
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.1e-127 460.7 386 66.3
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.9e-127 459.9 386 66.6
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 2.4e-127 459.5 321 76.0
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 3.2e-127 459.1 338 73.1
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 3.2e-127 459.1 338 73.1
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 5.4e-127 458.4 324 75.9
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 5.4e-127 458.4 335 73.4
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 7.1e-127 458.0 324 75.3
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 7.1e-127 458.0 324 75.3
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 9.2e-127 457.6 315 76.8
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 1.6e-126 456.8 320 76.2
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 2.1e-126 456.4 278 84.9
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 2.1e-126 456.4 371 69.0
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 4.6e-126 455.3 320 75.0
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 6.0e-126 454.9 315 76.2
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 7.8e-126 454.5 339 70.8
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 1.3e-125 453.8 324 76.2
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 2.3e-125 453.0 326 73.3
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 1.5e-124 450.3 331 72.5
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 1.9e-124 449.9 334 72.5
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 2.8e-123 446.0 323 73.1
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 1.4e-122 443.7 340 70.9
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.8e-122 443.4 318 75.5
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 4.0e-122 442.2 326 72.1
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 6.8e-122 441.4 335 72.8
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 6.8e-122 441.4 324 73.1
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 2.6e-121 439.5 332 71.1
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 2.6e-121 439.5 329 71.4
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 3.4e-121 439.1 329 72.0
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 9.9e-121 437.6 336 70.2
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 1.3e-120 437.2 381 64.6
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 1.7e-120 436.8 373 65.7
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 2.9e-120 436.0 317 75.4
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 4.9e-120 435.3 338 69.8
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 6.4e-120 434.9 348 67.0
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 8.4e-120 434.5 332 72.0
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 1.1e-119 434.1 332 72.3
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.4e-119 433.7 259 85.3
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 1.9e-119 433.3 317 72.9
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 5.4e-119 431.8 383 63.7
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 7.1e-119 431.4 303 75.9
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 2.1e-118 429.9 318 72.3
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 4.6e-118 428.7 290 77.2
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 6.0e-118 428.3 318 72.6
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 3.0e-117 426.0 376 63.0
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 5.6e-116 421.8 274 79.6
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 1.6e-115 420.2 247 87.4
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 1.6e-115 420.2 328 70.4
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 6.2e-115 418.3 336 69.0
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 8.1e-115 417.9 340 68.8
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 2.7e-110 402.9 364 62.4
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 6.0e-110 401.7 308 67.9
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 1.0e-109 401.0 313 70.6
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 5.1e-109 398.7 302 70.2
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.6e-107 392.5 386 58.0
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 3.6e-107 392.5 268 74.6
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.1e-106 391.0 268 74.3
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 1.8e-106 390.2 269 77.3
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 6.9e-106 388.3 313 65.2
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 2.6e-105 386.3 236 84.7
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 4.4e-105 385.6 271 72.3
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 1.1e-103 380.9 268 74.3
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 3.2e-103 379.4 477 50.1
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 2.1e-102 376.7 482 49.2
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 2.4e-98 363.2 267 69.7
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 2.4e-98 363.2 329 63.5
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 2.6e-97 359.8 333 63.4
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 4.5e-97 359.0 334 61.4
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 2.4e-95 353.2 268 68.3
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.5e-92 344.0 262 71.8
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 2.5e-92 343.2 243 75.3
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 2.5e-92 343.2 312 64.4
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.3e-92 342.8 209 84.2
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 7.4e-92 341.7 292 58.9
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 9.3e-87 324.7 210 78.6
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 3.0e-85 319.7 296 63.5
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 6.7e-85 318.5 380 53.4
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 2.5e-79 300.1 346 54.0
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 7.2e-79 298.5 178 86.5
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 2.1e-78 297.0 276 55.4
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 5.1e-77 292.4 263 57.0
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 3.8e-72 276.2 300 53.7
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.6e-70 270.8 286 52.1
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 2.5e-68 263.5 184 72.3
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 4.1e-66 256.1 268 53.7
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 6.5e-64 248.8 206 67.5
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 4.2e-63 246.1 263 51.3
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 1.0e-61 241.5 157 76.4
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 7.2e-55 218.8 129 85.3
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 6.1e-54 215.7 130 84.6
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 1.4e-50 204.5 136 75.0
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 1.0e-48 198.4 115 89.6
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 8.3e-43 178.7 253 39.5
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 4.1e-42 176.4 105 81.9
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 7.5e-28 129.0 178 43.8
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 9.8e-28 128.6 187 39.6
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.0e-25 120.9 82 76.8
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 3.9e-24 116.7 90 67.8
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 7.8e-17 92.4 149 40.3
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 1.2e-12 78.6 41 97.6
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 2.2e-11 74.3 38 92.1
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 2.7e-09 67.4 266 23.7
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 6.0e-09 66.2 36 88.9
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 4.3e-07 60.1 51 58.8


User provided reference genes

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