Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 9.3e-242 839.7 408 100.0
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 1.5e-130 470.3 304 74.7
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 1.8e-120 436.8 312 67.6
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 9.1e-120 434.5 310 69.0
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 1.5e-119 433.7 308 68.5
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 4.5e-119 432.2 305 67.2
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 5.9e-119 431.8 308 68.5
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 7.7e-119 431.4 332 64.8
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 2.2e-118 429.9 331 65.0
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 2.2e-118 429.9 307 69.1
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 5.0e-118 428.7 310 67.7
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 1.1e-117 427.6 312 67.0
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 1.9e-117 426.8 308 67.2
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 5.5e-117 425.2 310 69.0
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.6e-116 423.7 322 66.5
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 2.1e-116 423.3 314 64.6
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 1.4e-115 420.6 332 64.2
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 3.0e-115 419.5 305 64.3
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 5.1e-115 418.7 295 68.5
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 5.1e-115 418.7 313 65.8
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 5.1e-115 418.7 330 63.0
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 8.8e-115 417.9 311 65.9
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 8.8e-115 417.9 311 66.2
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 3.3e-114 416.0 302 65.2
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 4.4e-114 415.6 295 67.5
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 1.3e-113 414.1 311 64.0
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 1.3e-113 414.1 329 61.4
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 1.7e-113 413.7 307 66.8
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 2.2e-113 413.3 295 67.1
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 3.7e-113 412.5 301 66.8
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 4.8e-113 412.1 329 61.1
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 6.3e-113 411.8 301 66.8
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 8.2e-113 411.4 297 67.3
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 1.1e-112 411.0 295 67.1
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 1.4e-112 410.6 304 63.8
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 2.4e-112 409.8 295 66.4
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 2.4e-112 409.8 295 67.1
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 2.4e-112 409.8 297 64.3
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 4.1e-112 409.1 301 66.1
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 4.1e-112 409.1 321 62.6
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 5.3e-112 408.7 314 65.0
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 1.2e-111 407.5 331 61.6
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 1.5e-111 407.1 314 62.7
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 2.0e-111 406.8 327 60.9
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 2.6e-111 406.4 312 62.8
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 5.9e-111 405.2 312 62.5
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 1.0e-110 404.4 299 64.9
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 1.3e-110 404.1 312 62.5
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 6.5e-110 401.7 304 63.5
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 8.5e-110 401.4 331 60.7
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 5.5e-109 398.7 333 60.7
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 7.2e-109 398.3 307 62.5
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 1.2e-108 397.5 313 62.9
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 1.6e-108 397.1 304 63.8
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 8.8e-107 391.3 308 61.0
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 3.3e-106 389.4 338 58.9
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 4.4e-106 389.0 301 63.1
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 5.7e-106 388.7 297 63.6
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 5.7e-106 388.7 315 61.0
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 1.7e-105 387.1 311 61.1
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 2.2e-105 386.7 307 62.2
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.8e-105 386.3 306 61.1
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 2.8e-105 386.3 306 61.1
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 1.4e-104 384.0 298 63.4
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 1.4e-104 384.0 309 61.5
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 1.8e-104 383.6 299 62.2
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 2.4e-104 383.3 305 62.0
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 5.3e-104 382.1 306 60.8
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 7.0e-104 381.7 297 63.6
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 1.2e-103 380.9 298 63.1
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.2e-103 380.9 306 60.8
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 1.6e-103 380.6 294 62.9
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 4.5e-103 379.0 317 59.6
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 5.9e-103 378.6 326 57.7
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 5.9e-103 378.6 302 61.3
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 3.8e-102 375.9 307 62.9
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 2.1e-100 370.2 332 58.1
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 2.2e-97 360.1 363 53.7
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 1.1e-96 357.8 290 59.7
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 1.4e-96 357.5 304 56.9
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 1.4e-96 357.5 307 56.7
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.8e-96 357.1 301 56.8
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.7e-95 353.2 326 57.7
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 3.5e-95 352.8 358 52.8
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 4.5e-95 352.4 298 58.1
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 1.0e-86 324.7 291 55.0
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 3.3e-85 319.7 227 70.5
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 5.4e-80 302.4 226 65.9
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.3e-78 297.7 320 52.2
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 1.1e-77 294.7 290 51.7
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 1.4e-75 287.7 297 54.2
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 3.1e-75 286.6 290 51.0
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 1.5e-74 284.3 191 70.2
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 9.8e-74 281.6 584 32.5
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 2.9e-73 280.0 314 43.6
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.1e-67 260.0 275 52.0
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 8.9e-67 258.5 316 44.6
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 1.4e-59 234.6 167 67.7
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 1.5e-58 231.1 174 63.8
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 5.8e-58 229.2 189 58.7
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 1.1e-53 214.9 181 55.2
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 1.6e-52 211.1 173 59.0
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 8.1e-52 208.8 174 56.3
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 1.8e-51 207.6 184 53.3
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 6.6e-46 189.1 130 72.3
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 9.0e-43 178.7 135 63.0
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.3e-38 164.9 204 45.1
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 1.0e-30 138.7 104 65.4
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.4e-24 118.2 100 54.0
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 3.5e-23 113.6 81 58.0
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 6.7e-22 109.4 201 36.8
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 2.0e-18 97.8 81 54.3
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 1.9e-16 91.3 132 44.7
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 2.5e-16 90.9 82 51.2
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 3.2e-16 90.5 113 39.8
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 1.8e-14 84.7 79 49.4
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 3.9e-14 83.6 275 24.4
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 1.5e-13 81.6 64 62.5
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 9.7e-13 79.0 97 40.2
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 6.1e-07 59.7 37 81.1


User provided reference genes

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