Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 2.0e-89 332.4 172 100.0
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 9.9e-60 233.8 149 79.9
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 2.9e-59 232.3 143 82.5
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 7.1e-58 227.6 132 84.1
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 9.3e-58 227.3 153 75.8
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 2.7e-57 225.7 172 70.9
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.0e-56 223.8 166 70.5
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 5.1e-56 221.5 171 70.2
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 1.1e-55 220.3 132 80.3
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 1.1e-55 220.3 145 74.5
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 1.5e-55 219.9 160 70.0
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 1.9e-55 219.5 195 64.6
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 5.6e-55 218.0 160 71.2
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 7.3e-55 217.6 132 79.5
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 1.3e-54 216.9 163 70.6
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 3.6e-54 215.3 132 78.8
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 3.1e-53 212.2 132 77.3
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 5.3e-53 211.5 127 82.7
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 1.2e-52 210.3 145 71.7
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.0e-52 209.5 132 75.8
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 2.0e-52 209.5 170 64.1
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 2.6e-52 209.1 132 75.8
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 4.5e-52 208.4 132 76.5
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 5.8e-52 208.0 141 76.6
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 2.2e-51 206.1 143 74.1
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 6.4e-51 204.5 149 69.1
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 8.4e-51 204.1 122 78.7
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 8.4e-51 204.1 132 74.2
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 8.4e-51 204.1 121 81.8
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 1.1e-50 203.8 164 64.6
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 1.1e-50 203.8 132 74.2
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 1.1e-50 203.8 129 76.7
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 1.4e-50 203.4 128 78.1
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 1.4e-50 203.4 172 63.4
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 3.2e-50 202.2 172 63.4
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 3.2e-50 202.2 172 63.4
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 3.2e-50 202.2 112 86.6
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 5.4e-50 201.4 162 64.8
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 7.1e-50 201.1 178 61.2
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 1.2e-49 200.3 156 64.7
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 1.2e-49 200.3 168 63.7
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 1.6e-49 199.9 174 62.1
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 2.1e-49 199.5 149 68.5
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 2.7e-49 199.1 128 76.6
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 3.5e-49 198.7 174 63.2
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 6.0e-49 198.0 125 77.6
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 7.9e-49 197.6 122 76.2
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 1.8e-48 196.4 172 61.6
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 5.1e-48 194.9 122 75.4
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 1.1e-47 193.7 168 61.9
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 1.1e-47 193.7 171 65.5
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 2.5e-47 192.6 164 65.9
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 2.5e-47 192.6 170 62.4
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 3.3e-47 192.2 169 62.1
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 3.3e-47 192.2 170 62.9
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 5.6e-47 191.4 170 64.1
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 7.4e-47 191.0 121 71.9
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 9.6e-47 190.7 170 61.8
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 1.3e-46 190.3 172 61.6
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 4.8e-46 188.3 125 74.4
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 4.8e-46 188.3 112 83.9
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 2.4e-45 186.0 173 58.4
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 9.0e-45 184.1 174 62.1
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 1.2e-44 183.7 112 79.5
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 1.5e-44 183.3 154 59.7
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 2.0e-44 183.0 178 57.3
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 4.9e-43 178.3 109 78.9
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 6.4e-43 177.9 107 77.6
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 8.4e-43 177.6 158 58.9
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 1.1e-42 177.2 107 78.5
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 1.4e-42 176.8 128 69.5
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.9e-42 176.4 107 77.6
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 2.4e-42 176.0 111 74.8
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.2e-41 173.7 164 59.1
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.0e-40 170.6 102 78.4
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.0e-40 170.6 102 78.4
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.8e-40 169.9 177 53.1
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 3.9e-40 168.7 128 67.2
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 2.5e-39 166.0 104 78.8
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 7.4e-39 164.5 110 70.0
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.4e-37 160.2 161 57.8
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.5e-36 156.8 110 70.0
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 7.6e-36 154.5 112 68.8
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 1.3e-35 153.7 118 62.7
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 1.3e-35 153.7 146 60.3
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 2.2e-35 152.9 136 57.4
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 2.2e-35 152.9 164 54.3
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 2.9e-35 152.5 115 66.1
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 4.9e-35 151.8 154 53.2
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 1.4e-34 150.2 138 55.8
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 1.4e-34 150.2 119 60.5
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 9.3e-34 147.5 165 55.8
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 2.1e-33 146.4 151 51.7
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 7.9e-33 144.4 143 58.0
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 3.0e-32 142.5 99 77.8
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 1.3e-27 127.1 86 67.4
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 1.6e-25 120.2 102 59.8
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 2.2e-19 99.8 80 65.0
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 7.7e-12 74.7 99 52.5
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 2.9e-11 72.8 69 55.1
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 3.9e-08 62.4 42 66.7
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 3.9e-08 62.4 42 66.7
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 1.1e-07 60.8 116 33.6
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 2.0e-07 60.1 151 31.1


User provided reference genes

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